The thesis is aimed on hydromorphological assessment with usage of distance data. The distance method QuaWaDis is defined and the usage of results of image processing within the hydromorphological assessment is considered. The aim of the assessment is classification of hydromorphological conditions of water bodies according to Water Framework Directive 2000/60/EC. Distance method is based on visual interpretation of public data. Image processing results can extend the number of parameters of the distance method - object based classification was applied on aerial imagery (in land cover classification), unsupervised classification and image reclassification was applied on multispectral satellite data (in water depths classification). The calibration of distance method and the credibility of the distance data was evaluated in comparison with results of field survey EcoRivHab (Matoušková, 2008). Object based image processing was aimed on accuracy assessment, index of efficiency was defined and the concept of fuzzy logic was applied in accuracy assessment. From consideration of classification efficiency is obvious, that large internally heterogeneous objecs is more effectivelly to vectorise manually. Accuracy assessment with usage of concept of fuzzy logic shows the success of object recognition within each...

With the formal adoption of the Water Framework Directive in 2000, into European legislation it committed all member states to ensure that all inland waterbodies should reach good ecological status by 2015. As a result examination of the influence of hydromorphology on the ecological health of riverine ecosystems has become an increasingly important priority for statutory monitoring agencies such as the Environment Agency of England and Wales and equivalents in other parts of the UK. It is anticipated that by increasing our understanding of the role that hydromorphological processes play in shaping river habitats and the ecosystems that they support, river management strategies can be developed that will help lead to waterbodies achieving good ecological status. In this thesis, the influence of river hydromorphology and instream channel management activities on instream macroinvertebrate communities is explored. A two-scale approach was used at a regional macro-scale and local / catchment micro-scale. The macro-scale study examines the ecological, hydrological and geomorphological data for 88 river reaches located within the Environment Agency , Anglian Central and Anglian Northern regions, over a twenty year period (1986-2005). At the micro-scale two sub-catchments were selected, the River Bain and River Lymn, both located in Lincolnshire, England for detailed investigation. The micro-scale study was undertaken using ecological, hydrological and geomorphological data collected over three successive seasons (Autumn 2008, Spring 2009 and Summer 2009) enabling the seasonal variations and the influence of both stream size and habitat biotope on macroinvertebrate community composition and structure to be explored. The hydromorphological characteristics and condition of the rivers were quantified using ecologically relevant hydrological indices, calculated from flow discharge paired with geomorphological indices from River Habitat Survey data. The response of the instream macroinvertebrate communities was examined using a range of ecological indices including the Lotic-invertebrate Index for Flow Evaluation (LIFE). The results of the macro-scale investigation demonstrate that the macroinvertebrate community is directly influenced by instream hydromorphology and the level of anthropogenic modification. The micro-scale study highlights important differences in macroinvertebrate communities associated with instream habitat / biotope composition. The quantification of river hydromorphology, with the use of ecologically relevant hydrological indices and geomorphological indices, derived from River Habitat Survey data, is discussed with regards its ability to help explain the structure and composition of macroinvertebrate communities within highly managed /regulated riverine ecosystems. The implications of this research for river managers and for implementing river restoration and rehabilitation schemes are explored.

L’Orge est une petite rivière de plaine fortement segmentée, du bassin parisien. En 2010, elle comptait en moyenne un clapet tous les kilomètres sur sa partie aval. Pour rétablir la continuité écologique du cours d’eau, le Syndicat de l’Orge efface progressivement ces ouvrages. L'objet de cette thèse est le suivi biogéochimique, hydro-sédimentaire et écologique d'un bief de l’Orge de 6 km où 3 clapets consécutifs ont été effacés.Les hauteurs d’eau dans la rivière ayant baissé, des bancs de vase ont été mis à l'air. Ces banquettes de sédiments subissent des séquences d’inondation/exondation au rythme des crues. Les transformations de l’azote et du soufre y sont particulièrement actives et dynamiques. Cependant, les faibles flux d’eau échangés (modélisation) limitent l’impact des banquettes sur la rivière. Des processus intenses de précipitation/solubilisation des sulfates, liés aux variations des niveaux d’eau, ont une importance non négligeable sur la dégradation de la matière organique et la production d’ammonium dans la banquette.La capacité de transport de sédiments de la rivière a fortement évolué suite aux effacements, ce qui se traduit par l’apparition d'une granulométrie plus grossière en fond de lit. Ont été évalué la nouvelle vitesse de transit des particules charriées et le temps nécessaire pour atteindre un nouvel équilibre du lit et des espèces biologiques qui y vivent. Les indicateurs biologiques montrent que les effacements améliorent l’habitabilité de la rivière.Ces suivis montrent l’impact positif des effacements de barrage sur une rivière de plaine, même si un suivi dans la durée reste nécessaire pour confirmer les évolutions mises en évidence. / Orge is a lowland river from Seine’s watershed, France. In 2010, Orge River was highly segmented with on average one dam (< 2m) every kilometer in downstream part. To restore the ecological continuity of the river, the “Syndicat de l’Orge” gradually removes these little dams. The purpose of this thesis is the monitoring of hydro-morphology, biogeochemistry and ecological of a section of 6 km of Orge where 3 consecutive dams have been removed in spring 2010.After the water level decrease, some previously drowned sediment deposits appear along the river bank. These sediment banks are frequently inundated by high flows. Nitrogen and sulfate processes are very intense onto these banks. However, a model shows that water fluxes limited biochemical impact of sediment banks on the river. Intense precipitation/solubilization sulfate processes, link with water level variations, have a significant importance on organic matter degradation and ammonium production in sediment banks.The sediment transport capacity of the river has changed significantly after dam removal. It results in an increase of the maximum transportable diameter of the river, leading to the appearance of a coarser bed in-situ. It was possible to evaluate the new transit speed of particles carried along and highlight the time required to reach a new equilibrium of the bed and the biological species that live there. Biological indicators show that removals enhanced the livability of the river.All these studies show the positives impacts of dam removal on a lowland river, even if a monitoring in time is still needed to confirm the first developments highlighted here.

Das Verständnis über die Ausprägung der Lebensgemeinschaften von benthischen Invertebraten in aquatischen Ökosystemen in Abhängigkeit von abiotischen Faktoren ist von grundlegender wissenschaftlicher Bedeutung und eine Voraussetzung für die Bewertung, den Schutz und die Wiederherstellung der ökologischen Integrität in Fließgewässern. Für die Erarbeitung von Abhängigkeiten zwischen der benthischen Lebensgemeinschaft, der Hydromorphologie und der Saprobie standen insgesamt 409 Datensätze in Form von Taxalisten des Makrozoobenthos zur Verfügung. Diese wurden mit Strukturgütedaten verschnitten und anhand uni- und multivariater statistischer Methoden analysiert. Folgende Ergebnisse konnten dabei erzielt werden: (a) es können sieben Einzelparameter der Gewässerstruktur identifiziert werden, die einen signifikanten Einfluss auf die benthische Biozönose ausüben, (b) die Fließgewässertypen 5 und 5.1 unterscheiden sich auf Basis des vorliegenden Datensatzes weder in der taxonomischen noch in der funktionalen Zusammensetzung der Makrozoobenthoszönose und (c) bei einer erhöhten saprobiellen Belastung überlagert der Einfluss der organischen Belastung die strukturellen Gegebenheiten. Für die Entwicklung und Anpassung effizienter Strukturgüteverfahren und die daraus resultierenden Monitoring- und Maßnahmenprogramme für ein integriertes Fließgewässermanagement ist die Auswahl ökologisch relevanter Parameter von immenser Bedeutung. / The understanding about the development of benthic invertebrate communities as a function of abiotic influencing factors in aquatic ecosystems is of essential scientific relevance for the assessment of the ecological status of rivers and streams. For the development of interdependencies between benthic invertebrates, hydromorphology and saprobity, 409 species lists of the macroinvertebrates were provided. They were aggregated with morphological features and analysed with different uni- and multivariate statistical methods. On the basis of the used analyses, the following results were achieved: (a) seven ecological relevant morphological features with significant influence to benthic invertebrate community could be identified, (b) on the basis of the present database, the structural and functional composition of the benthic invertebrates can not be differ river type specific (type 5 and 5.1) and (c) if the saprobic pressure decrease, the organic pressure superpose the hydromorphology. The values of the biological attributes are low in spite of near natural morphological conditions. For an ecological efficiency stream habitat assessment, the identified relevant morphological parameters have to consider. The “morphological characteristic curves” are well describing the results of a local monitoring. This application-oriented instrument can be used for (a) the operationalisation of environmental objectives, (b) the development and adaption of monitoring strategies and (c) the derivation and prioritisation of ecological and economic efficiency measurements for an integrated river management.

Made available in DSpace on 2015-05-14T12:09:18Z (GMT). No. of bitstreams: 1 arquivototal.pdf: 5218411 bytes, checksum: 982b51482ea602e19aee7636815a5ee8 (MD5) Previous issue date: 2013-03-20 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / This study aimed to evaluate the stream hydromorphological Guaraíra through the Bavarian method. The basin of the creek is located within the catchment area of Gramame, the southern portion of the state of Paraíba. Therefore, the creek was divided into 47 sections of 100 meters. During the survey of the characteristics of the stream was possible to observe the level of anthropogenic modification along its route. These surveys take into account the dynamics of river and plain and with the junction of the dynamics is obtained modification degree ranging from 1 (no change) to 7 (completely changed), based on the use of the method Bávaro. The creek Guaraíra has 81% of its route unchanged, despite being in a watershed with 33.63% of its area modified crops of sugar cane and pineapple. The 19% change were due to engineering works and, as previously mentioned, sugarcane also influenced this change in the natural state. With the method, it is clear that investments for restoration of local anthropogenic are more effective due to the division of the stream in patches. Thus, save yourself money and time by acting at the core of the problems. / Este trabalho teve como objetivo a avaliação hidromorfológica do riacho Guaraíra, através do método Bávaro. A bacia hidrográfica do riacho está localizada dentro da bacia hidrográfica do Gramame, porção sul do Estado da Paraíba. Para tanto, o riacho foi divido em 47 trechos de 100 metros. Durante o período de levantamento das características do riacho foi possível observar o nível de modificação antrópica ao longo de seu percurso. Esses levantamentos levaram em consideração as dinâmicas do rio e da várzea e com a junção das dinâmicas se obtém o grau de modificação que varia de 1 (inalterado) a 7 (completamente alterado), a partir da utilização do método Bávaro. O riacho Guaraíra possui 81% do seu percurso inalterado, apesar de estar em uma bacia hidrográfica com 33,63% de sua área modificada pelas culturas da cana de açúcar e do abacaxi. Os 19% de alteração foram devido, a obras de engenharia e, como já citado anteriormente, a cana de açúcar também influenciou nessa alteração do estado natural. Com o método, fica claro que investimentos para restauração de locais antropizados são mais eficazes, devido à divisão do riacho em trechos. Dessa forma, economizam-se recursos financeiros e tempo agindo no cerne dos problemas.

Das Verständnis über die Ausprägung der Lebensgemeinschaften von benthischen Invertebraten in aquatischen Ökosystemen in Abhängigkeit von abiotischen Faktoren ist von grundlegender wissenschaftlicher Bedeutung und eine Voraussetzung für die Bewertung, den Schutz und die Wiederherstellung der ökologischen Integrität in Fließgewässern. Für die Erarbeitung von Abhängigkeiten zwischen der benthischen Lebensgemeinschaft, der Hydromorphologie und der Saprobie standen insgesamt 409 Datensätze in Form von Taxalisten des Makrozoobenthos zur Verfügung. Diese wurden mit Strukturgütedaten verschnitten und anhand uni- und multivariater statistischer Methoden analysiert. Folgende Ergebnisse konnten dabei erzielt werden: (a) es können sieben Einzelparameter der Gewässerstruktur identifiziert werden, die einen signifikanten Einfluss auf die benthische Biozönose ausüben, (b) die Fließgewässertypen 5 und 5.1 unterscheiden sich auf Basis des vorliegenden Datensatzes weder in der taxonomischen noch in der funktionalen Zusammensetzung der Makrozoobenthoszönose und (c) bei einer erhöhten saprobiellen Belastung überlagert der Einfluss der organischen Belastung die strukturellen Gegebenheiten. Für die Entwicklung und Anpassung effizienter Strukturgüteverfahren und die daraus resultierenden Monitoring- und Maßnahmenprogramme für ein integriertes Fließgewässermanagement ist die Auswahl ökologisch relevanter Parameter von immenser Bedeutung. / The understanding about the development of benthic invertebrate communities as a function of abiotic influencing factors in aquatic ecosystems is of essential scientific relevance for the assessment of the ecological status of rivers and streams. For the development of interdependencies between benthic invertebrates, hydromorphology and saprobity, 409 species lists of the macroinvertebrates were provided. They were aggregated with morphological features and analysed with different uni- and multivariate statistical methods. On the basis of the used analyses, the following results were achieved: (a) seven ecological relevant morphological features with significant influence to benthic invertebrate community could be identified, (b) on the basis of the present database, the structural and functional composition of the benthic invertebrates can not be differ river type specific (type 5 and 5.1) and (c) if the saprobic pressure decrease, the organic pressure superpose the hydromorphology. The values of the biological attributes are low in spite of near natural morphological conditions. For an ecological efficiency stream habitat assessment, the identified relevant morphological parameters have to consider. The “morphological characteristic curves” are well describing the results of a local monitoring. This application-oriented instrument can be used for (a) the operationalisation of environmental objectives, (b) the development and adaption of monitoring strategies and (c) the derivation and prioritisation of ecological and economic efficiency measurements for an integrated river management.

Today, the study of fluvial-morphological processes is focused on evaluating hydromorfological status of streams and on proposing restoration measures. A fundamental prerequisite for assessing the current hydromorphological status of streams is establishing reference conditions for each stream type that serve as a benchmark and represent the target status after restoration. The aim of this thesis is to describe type-specific hydromorphological reference conditions for rivers on the territory of the Czech Republic with the help of determining river types, developing the REFCON method for establishing reference sites and recording characteristics of reference status. The approach to establishing reference sites is based on meeting the criteria of having minimal anthropogenic impact that are first assessed using cartographic data and subsequently verified through field survey. Parameters - altitude, sinuosity, and valley floor slope - for classifying river reaches into types were determined on the basis of the results of statistical methods applied on 3197 river reaches covering the whole territory of the Czech Republic. The classification of river reaches into 9 river types was verified through field survey at 44 sites. Detailed field survey and measurements of characteristics of natural channel...

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Climate change and human activities alter the hydrologic systems and exerted global scale impacts on our environment with significant implications for water resources. Climate change can be characterized by the change of precipitation and temperature, and both precipitation pattern change and global warming are associated with the increase in frequency of flooding or drought and low flows. With increasing water demand from domestic, agricultural, commercial, and industrial sectors, humans are increasingly becoming a significant component of the hydrologic cycle. Human activities have transformed hydrologic processes at spatial scales ranging from local to global. Human activities affecting watershed hydrology include land use change, dam construction and reservoir operation, groundwater pumping, surface water withdrawal, irrigation, return flow, and others. In this thesis, the hydromorphology (i.e., the change of coupled hydrologic and human systems) of the Econlockhatchee River (Econ River for short) is studied. Due to the growth of the Orlando metropolitan area the Econ basin has been substantially urbanized with drastic change of the land cover. The land use / land cover change from 1940s to 2000s has been quantified by compiling existing land cover data and digitizing aerial photography images. Rainfall data have been analyzed to determine the extent that climate change has affected the river flow compared to land use change. The changes in stream flow at the annual scale and low flows are analyzed. The Econ River has experienced minimal changes in the amount of annual streamflow but significant changes to the amount of low flows. These changes are due to urbanization and other human interferences.

There have been growing concerns over the decline of healthy river ecosystems and the severe consequences this decline could have on biodiversity, ecosystem services, and human well-being. These concerns have led to increased efforts in river restoration around the globe, which aim to improve the ecological health and functioning of rivers. The restoration is usually done by implementing strategies such as hydromorphological adaptation and flow management. These measures, nevertheless, do not guarantee the recovery of river ecosystems. This is because there are multiple factors contributing to the success of restoration projects, which can vary depending on the specific characteristics of each river system. Habitat modeling, one of the most widely used ecological quality assessment tools for rivers, has been applied in the evaluation of restoration projects. An aquatic ecosystem is complex, and its dynamic nature requires a comprehensive understanding of the interconnections between biotic and abiotic components. These components also have a high degree of spatial and temporal variability. Therefore, it is crucial that approaches and modeling techniques be tailored to capture this dynamic. In the assessment of river restoration, for instance, habitat modeling needs to account for the changes in flow patterns, sediment transport, water quality, and habitat availability/quality for the key indicator species that result from the restoration efforts. This study addresses the need for developing an integrated approach to habitat modeling, particularly for macrozoobenthos, an important indicator of river health that plays a crucial role in the functioning of aquatic ecosystems. The primary research objective is to improve the existing modeling framework (TRiMM) by focusing on three key aspects: 1) expanding the prediction factors of physical habitat that influence habitat suitability for macrozoobenthos; 2) integrating fuzzy algorithms in the suitability assignment process; 3) incorporating species' (re-)colonization capacity and habitat temporal variability into habitat connectivity assessment. The model adopts the fuzzy logic method in the habitat module to account for the interactions between various factors described in the habitat template (Poff & Ward, 1990). Moreover, the model considers both spatial and temporal changes in habitat parameters by running a transient simulation over a specific time period relevant to the life cycle requirements of the target species. This allows for a more accurate representation of the dynamic nature of river habitats and provides valuable insights into how they may change over time. Additionally, the model incorporates species' (re-)colonization potentials into habitat connectivity analysis by considering their dispersal capabilities. This helps in understanding how changes in habitat parameters can affect the overall connectivity of river habitats, which is crucial for assessing the resilience and sustainability of the systems. The proposed transient habitat modeling (TRiMM 2.0) is applied to two case studies of low-order rivers in Germany. The first case study focuses on a river that has been restored after a period of degradation. The habitat model was tested with sampling data, and the results reveal that the model improved when additional variables related to habitat were included. The second case study was a simulation of habitat suitability and connectivity in a hypothetical river reach. Hydraulic and morphological factors (water depth, velocity, temperature, and sediment) are simulated over a period of four years using SRH-2D. The simulation results showed that hydraulic and morphological factors had a significant impact on sediment characteristics, which in turn influenced habitat suitability and connectivity. This study also highlights the importance of considering multiple variables and their interactions when assessing river habitats. Additionally, the use of transient modeling provides information about long-term changes in habitat quality and connectivity.:Abstract Kurzfassung Contents List of figures List of tables Nomencature Acknowledgement List of publications 1. General introduction 1.1. Research motivation 1.2. Statement of research objectives 1.3. Structure of the dissertation 2. Macrozoobenthos and stream’s ecology 2.1. Macrozoobenthos and their habitat 2.2. Factors influencing the distribution of macrozoobenthos 2.2.1. Food sources 2.2.2. Water quality 2.2.3. Physical habitat 2.2.4. Colonization process 2.2.5. Presence of other species 2.3. Spatial scale and temporal variability 2.4. Conclusion 3. State of the art in river habitat modeling 3.1. Habitat modeling and river ecology assessment 3.2. Habitat modeling principles 3.2.1. Habitat suitability curves method 3.2.2. Fuzzy logic method 3.2.3. Generalized additive models 3.3. Existing benthos habitat modeling 3.3.1. PHABSIM 3.3.2. RHYHABSIM 3.3.3. BITHABSIM 3.3.4. CASiMiR 3.3.5. HABFUZZ 3.4. TRiMM and further development 3.5. Conclusion 4. Basis for the modeling concept and methodological framework 4.1. Physical habitat template 4.1.1. Streamflow regime 4.1.2. Substrate regime 4.1.3. Thermal regime 4.2. Habitat connectivity 4.3. Species colonization and habitat connectivity 4.4. Analysis scales 4.5. Conclusion 5. Transient river habitat modeling for macrozoobenthos – TRiMM 2.0 5.1. Habitat model description 5.2. Input data preparation 5.2.1. Field survey 5.2.2. Hydro-morphodynamic models 5.3. Habitat suitability calculation 5.4. Patch-building and patch dynamics analysis 5.5. Habitat connectivity calculation 5.6. Conclusion 6. Model applications 6.1. Case study 1: Simulation of habitat suitability for macrozoobenthos in a small restored stream (Saxony, Germany) Abstract 6.1.1. Introduction 6.1.2. Material and Method 6.1.3. Results 6.1.4. Discussion 6.1.5. Conclusion 6.2. Case study 2: Application of TRiMM 2.0 to simulate benthic habitat quality in a hypothetical reach of Zschopau river 6.2.1. Introduction 6.2.2. Methodology 6.2.3. Results 6.2.4. Discussion 6.2.5. Conclusion 7. Summary and future outlook 8. References