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Magnetic Resonance Parameters of Radicals Studied by Density Functional Theory MethodsTelyatnyk, Lyudmyla January 2004 (has links)
<p>The recent state of art in the magnetic resonance area putsforward the electron paramagnetic resonance, EPR, and nuclearmagnetic resonance, NMR, experiments on prominent positions forinvestigations of molecular and electronic structure. A mostdifficult aspect of such experiments is usually the properinterpretation of data obtained from high-resolution spectra,that, however, at the same time opens a great challenge forpure theoretical methods to interpret the spectral features.This thesis constitutes an effort in this respect, as itpresents and discusses calculations of EPR and NMR parametersof paramagnetic molecules. The calculations are based on newmethodology for determination of properties of paramagneticmolecules in the framework of the density functional theory,which has been developed in our laboratory.</p><p>Paramagnetic molecules are, in some sense, very special. Thepresence of unpaired electrons essentially modifies theirspectra. The experimental determination of the magneticresonance parameters of such molecules is, especially in theNMR case, quite complicated and requires special techniques ofspectral detection. The significant efforts put into suchexperiments are completely justi fied though by the importantroles of paramagnetic species playing in many areas, such as,for example, molecular magnets, active centers in biologicalsystems, and defects in inorganic conductive materials.</p><p>The first two papers of this thesis deal with thetheoretical determination of NMR parameters, such as thenuclear shielding tensors and the chemical shifts, inparamagnetic nitroxides that form core units in molecularmagnets. The developed methodology aimed to realize highaccuracy in the calculations in order to achieve successfulapplications for the mentioned systems. Theeffects of hydrogenbonding are also described in that context. Our theory forevaluation of nuclear shielding tensors in paramagneticmolecules is consistent up to the second order in the finestructure constant and considers orbital, fully isotropicdipolar, and isotropic contact contributions to the shieldingtensor.</p><p>The next three projects concern electron paramagneticresonance. The wellknown EPR parameters, such as the g-tensorsand the hyperfine coupling constants are explored. Calculationsof electronic g-tensors were carried out in the framework of aspin-restricted open-shell Kohn-Sham method combined with thelinear response theory recently developed in our laboratory.The spincontamination problem is then automatically avoided.The solvent effects, described by the polarizable continuummodel, are also considered. For calculations of the hyperfinecoupling constants a so-called restricted-unrestricted approachhas been developed in the context of density functional theory.Comparison of experimentally and theoretically determinedparameters shows that qualitative mutual agreement of the twosets of data can be easily achieved by employing the proposedformalisms.</p>
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Magnetic Resonance Parameters of Radicals Studied by Density Functional Theory MethodsTelyatnyk, Lyudmyla January 2004 (has links)
The recent state of art in the magnetic resonance area putsforward the electron paramagnetic resonance, EPR, and nuclearmagnetic resonance, NMR, experiments on prominent positions forinvestigations of molecular and electronic structure. A mostdifficult aspect of such experiments is usually the properinterpretation of data obtained from high-resolution spectra,that, however, at the same time opens a great challenge forpure theoretical methods to interpret the spectral features.This thesis constitutes an effort in this respect, as itpresents and discusses calculations of EPR and NMR parametersof paramagnetic molecules. The calculations are based on newmethodology for determination of properties of paramagneticmolecules in the framework of the density functional theory,which has been developed in our laboratory. Paramagnetic molecules are, in some sense, very special. Thepresence of unpaired electrons essentially modifies theirspectra. The experimental determination of the magneticresonance parameters of such molecules is, especially in theNMR case, quite complicated and requires special techniques ofspectral detection. The significant efforts put into suchexperiments are completely justi fied though by the importantroles of paramagnetic species playing in many areas, such as,for example, molecular magnets, active centers in biologicalsystems, and defects in inorganic conductive materials. The first two papers of this thesis deal with thetheoretical determination of NMR parameters, such as thenuclear shielding tensors and the chemical shifts, inparamagnetic nitroxides that form core units in molecularmagnets. The developed methodology aimed to realize highaccuracy in the calculations in order to achieve successfulapplications for the mentioned systems. Theeffects of hydrogenbonding are also described in that context. Our theory forevaluation of nuclear shielding tensors in paramagneticmolecules is consistent up to the second order in the finestructure constant and considers orbital, fully isotropicdipolar, and isotropic contact contributions to the shieldingtensor. The next three projects concern electron paramagneticresonance. The wellknown EPR parameters, such as the g-tensorsand the hyperfine coupling constants are explored. Calculationsof electronic g-tensors were carried out in the framework of aspin-restricted open-shell Kohn-Sham method combined with thelinear response theory recently developed in our laboratory.The spincontamination problem is then automatically avoided.The solvent effects, described by the polarizable continuummodel, are also considered. For calculations of the hyperfinecoupling constants a so-called restricted-unrestricted approachhas been developed in the context of density functional theory.Comparison of experimentally and theoretically determinedparameters shows that qualitative mutual agreement of the twosets of data can be easily achieved by employing the proposedformalisms.
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Studies of Solution Paramagnetic-Substrate Nuclear and Electron Intermolecular InteractionsRuss, Jennifer Lynn 26 April 2006 (has links)
Advanced nuclear and electron magnetic resonance techniques (i.e. nuclear magnetic resonance (NMR), dynamic nuclear polarization (DNP), and magnetic resonance imaging (MRI)) were used to study the attitude and dynamics of TEMPO (2,2,6,6-tetramethylpiperidinyloxy)-substrate systems and the relaxivity properties of water-soluble trimetallic nitride template functionalized endohedral metallofullerenes (TNT-fMF). The attitude and average distance of interaction for each TEMPO-substrate system was determined from comparing density functional theory (DFT) calculation results with experimental hyperfine coupling constants leading to an improved understanding of solution dynamics. The short-lived solvent-solute interactions of the TEMPO-substrate molecules, such as transient complex formation, are governed by weak hydrogen-bonding interactions. The collisions in solution were explained by determining the favored orientations of the two molecules interacting using calculated relative energy minima and reproducibility of the experimental results by the calculated coupling constants.
Water-soluble TNT-fMFs are studied as candidates for the next generation MRI contrast agents as diagnostic agents and also as possible therapeutic agents to kill cancer cells and decrease tumors. The TNT-fMFs are being studied as part of a multi-modal platform dependent upon which metal atoms are encapsulated inside: Gd — MRI contrast agent (diagnostic), Lu and Ho — radio labeled for use as a therapeutic agent, Tb – fluorescence, and Lu – x-ray contrast. The current commercial MRI contrast agent, OmniscanTM, contains one gadolinium atom; however, the metal is complexed to, not encapsulated in, the molecule. TNT-fMFs fully encapsulate three metal atoms to ensure the patient does not run the risk of metal poisoning. The r1 and r2 relaxivities of TNT-fMFs containing either Gd, Lu, Ho, or Sc metals were measured at 0.35T. The data for the Gd containing TNT-fMFs indicated the metallofullerene has significantly higher relaxivities than OmniscanTM, and can be the next generation MRI contrast agent. The Ho containing species has a high r2/r1 ratio compared to the other samples showing it is a potential T2 agent, and has therapeutic capabilities. / Ph. D.
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Quantum Chemical Studies of Radical Cation Rearrangement, Radical Carbonylation, and Homolytic Substitution ReactionsNorberg, Daniel January 2007 (has links)
<p>Quantum chemical calculations have been performed to investigate radical cation rearrangement, radical carbonylation, and homolytic substitution reactions of organic molecules.</p><p>The rearrangement of the bicyclopropylidiene radical cation to the tetramethyleneethane radical cation is predicted to proceed with stepwise disrotatory opening of the two rings. Each ring opening is found to be combined with a striking pyramidalization of a carbon atom in the central bond.</p><p>The isomerization of the norbornadiene radical cation to the cycloheptatriene radical cation (<b>CHT</b><b>.+</b>), initialized by opening of a bridgehead–methylene bond, is investigated. The most favorable path involves concerted rearrangement to the norcaradiene radical cation followed by ring opening to <b>CHT</b><b>.+</b>. The barrier of this channel is found to be significantly reduced upon substitution of the methylene group with C(CH<sub>3</sub>)<sub>2</sub>.</p><p>Stepwise mechanisms are predicted to be favored over concerted isomerization for the McLafferty rearrangement of the radical cations of butanal and 3-fluorobutanal. The barrier for the concerted rearrangement is found to be lowered by 17.2 kcal/mol upon substitution, a result which is rationalized by the calculated dipole moments and atomic charges.</p><p>Recent experiments showed that photoinitiated carbonylation of alkyl iodides with [<sup>11</sup>C]carbon monoxide may be significantly enhanced by using small amounts of ketones that have nπ* character of their excited triplet state. DFT calculations show the feasibility of an atom transfer type mechanism, proposed to explain these observations. Moreover, the computational results rationalize the observed differences in yield when using various alcohol solvents.</p><p>Finally, following photolysis of methyliodide, recent electron spin resonance spectroscopy experiments demonstrated that the S<sub>H</sub>2 reaction <sup>•</sup>CD<sub>3</sub> + SiD<sub>3</sub>CH<sub>3</sub> → CD<sub>3</sub>SiD<sub>3</sub> + <sup>•</sup>CH<sub>3</sub> proceeds with high selectivity over the energetically more favorable D abstraction. The role of geometrical effects, especially the formation of prereactive complexes between methylsilane and methyliodide is studied, and a plausible explanation for the experimentally observed paradox is presented.</p>
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Quantum Chemical Studies of Radical Cation Rearrangement, Radical Carbonylation, and Homolytic Substitution ReactionsNorberg, Daniel January 2007 (has links)
Quantum chemical calculations have been performed to investigate radical cation rearrangement, radical carbonylation, and homolytic substitution reactions of organic molecules. The rearrangement of the bicyclopropylidiene radical cation to the tetramethyleneethane radical cation is predicted to proceed with stepwise disrotatory opening of the two rings. Each ring opening is found to be combined with a striking pyramidalization of a carbon atom in the central bond. The isomerization of the norbornadiene radical cation to the cycloheptatriene radical cation (CHT.+), initialized by opening of a bridgehead–methylene bond, is investigated. The most favorable path involves concerted rearrangement to the norcaradiene radical cation followed by ring opening to CHT.+. The barrier of this channel is found to be significantly reduced upon substitution of the methylene group with C(CH3)2. Stepwise mechanisms are predicted to be favored over concerted isomerization for the McLafferty rearrangement of the radical cations of butanal and 3-fluorobutanal. The barrier for the concerted rearrangement is found to be lowered by 17.2 kcal/mol upon substitution, a result which is rationalized by the calculated dipole moments and atomic charges. Recent experiments showed that photoinitiated carbonylation of alkyl iodides with [11C]carbon monoxide may be significantly enhanced by using small amounts of ketones that have nπ* character of their excited triplet state. DFT calculations show the feasibility of an atom transfer type mechanism, proposed to explain these observations. Moreover, the computational results rationalize the observed differences in yield when using various alcohol solvents. Finally, following photolysis of methyliodide, recent electron spin resonance spectroscopy experiments demonstrated that the SH2 reaction •CD3 + SiD3CH3 → CD3SiD3 + •CH3 proceeds with high selectivity over the energetically more favorable D abstraction. The role of geometrical effects, especially the formation of prereactive complexes between methylsilane and methyliodide is studied, and a plausible explanation for the experimentally observed paradox is presented.
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