Development of biomass feedstocks with desirable traits for cost-effective conversion is one of the main focus areas in biofuels research. As suggested by techno-economic analyses, the success of a lignocellulose-based biorefinery largely relies on the utilization of lignin to generate value-added products, i.e. fuels and chemicals. The fate of lignin and its structural/compositional changes during pretreatment have received increasing attention; however, the effect of genetic modification on the fractionation, depolymerization and catalytic upgrading of lignin from genetically engineered plants is not well understood. This study aims to fractionate and characterize the lignin streams from a wild-type and two genetically engineered switchgrass (Panicum virgatum) species (low lignin content with high S/G ratio and high lignin content) using three different pretreatment methods, i.e. dilute sulfuric acid, ammonia hydroxide, and aqueous ionic liquid (cholinium lysinate). The structural and compositional features and impact of lignin modification on lignin-carbohydrate complex characteristics and the deconstruction of cell-wall compounds were investigated. Moreover, a potential way to upgrade low molecular weight lignin to lipids by Rhodococcus opacus was evaluated. Results from this study provide a better understanding of how lignin engineering of switchgrass influences lignin fractionation and upgrading during conversion processes based on different pretreatment technologies.

The blending of lignin as a component in a thermoplastic blend poses a challenge in the form of dispersion and compatibility. Polyesters such as poly(lactic acid) and poly(butylene adipate-co-terephthalate) offer the best opportunity of compatibility in melt blending with lignin due to their ability to form hydrogen bonds. The fractionation of lignin into more homogeneous fractions offers better dispersion and more consistent properties, retaining the toughness of the original polymer in addition to bridging stress transfer between PLA and PBAT. Functionalization of lignin was done by lactic acid grafting. The resulting blend of PLA/PBAT/modified fractionated lignin showed improved interaction between lignin and PLA, but reduced compatibility between lignin and PBAT. This thesis provides a deeper understanding on the effect of lignin heterogeneity, its fractions, and the functionalization of lignin on lignin and bioplastic blends to further the use of a largely produced industrial by-product in high value applications. / Natural Sciences and Engineering Research Council (NSERC) – Lignoworks Biomaterials and Chemicals Strategic Research Network, Canadian Foundation for Innovation (CFI), Ontario Ministry of Agriculture, Food and Rural Affairs (OMAFRA)

La première partie de ce projet à consisté à isoler la lignine à partir de liqueurs industrielles et à la purifier pour s’affranchir des sucres, des minéraux et autres constituants. Pour cela, un protocole efficace en trois étapes a été proposé pour obtenir des échantillons de lignine avec une pureté satisfaisante (95%) et pour récupérer 68% de la lignine initialement présente dans la liqueur alcaline de départ. La lignine alcaline purifiée a ensuite été caractérisée d’un point de vue moléculaire et par analyses thermiques. L’élucidation de la structure de la lignine alcaline a permis d’appréhender sa fonctionnalisation par oxydation. Les analyses par chromatographie d’exclusion stérique de la lignine après oxydation ont montré une diminution de la masse molaire confirmant ainsi le clivage. Trois fractions différentes ont été isolées après l’oxydation de la lignine selon le solvant d’extraction ; d’une part des oligomères (plus ou moins fonctionnalisés) et d’autre part des molécules aromatiques (dont15% de vanilline). Ce travail de thèse aura abouti à la synthèse de composés aromatiques à haute valeur ajoutée (vanilline) et d’oligomères de lignine fonctionnalisés par des fonctions acide carboxylique. Les applications envisageables de ces « polyacides » issus de lignine sont nombreuses pour la formation de nouveaux polymères bio-sourcés tels que des polyesters, polyamides ou encore polyuréthanes. / A valorization of alkaline lignin from an industrial pulping liquor has been proposed for this project. Before considering any chemical modification or potential applications, the lignin structure has been elucidated. An efficient three-steps protocol for extraction and purification of lignin from industrial liquor has been established. This protocol leads to high purity sample of lignin (95%) and allows the recovery (68%) of the lignin initially present in the alkaline liquor. Alkaline lignin has been characterized utilizing analytical methods and thermogravimetric analysis. This precise structure elucidation was critical for proceeding to chemical modification of alkaline lignin. Chemical modification of alkaline lignin has been done by oxidation in alkaline media. Three major oxidized products have been isolated depending on the extraction solvent: oligomers bearing carboxylic groups and aromatic molecules. This thesis work led to the synthesis of value-added bio-sourced chemicals and functionalized oligomers. The polyacids from lignin obtained should be studied to form new biobased polymers such as polyesters, polyamids or polyurethanes.