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Student Number : 0316126G - MSc dissertation - School of Animal, Plant and Environmental Sciences - Faculty of Science / I investigated whether inorganic contaminants associated with gold mining waste discharges in the Free State Province, South Africa, were accumulated by a threatened species of lizard, Cordylus giganteus; if the route of exposure could be dietary, and whether accumulation of contaminants could be associated with potential physiological costs. I compared elemental concentrations in tissue and blood samples between populations of this species, from four sites around the province. Inorganic contaminants were known to be elevated in soils, water, sediments and vegetation of the first mining site, and to a lesser extent at the second mining site. The third site was not known to be contaminated by mining discharges, but was selected because of its potential to be contaminated by wind-blown contaminants. This site was also heavily overgrazed. The fourth site was both uncontaminated by mining and relatively undisturbed. Lizards from the most contaminated site had significantly higher blood concentrations of Li, Na, Al, S, Ca, P, Si, Cr, Mn, Fe, Ni, W and Bi when compared with all the other sites investigated. Based upon a comparison of elemental concentrations in selected lizard prey items found at these sites (Coleoptera, Tenebrionidae) I did not find conclusive evidence for a dietary route of exposure to contaminants. I tested for significant differences in body condition among populations. Lizards from the heavily grazed site were in similar condition to lizards from the most contaminated site, and all these lizards were in significantly poorer condition than lizards from the undisturbed site. The adult sex ratio of the population inhabiting the most contaminated site also deviated significantly from an expected 1:1 ratio in favour of females. The reason for this deviation is not understood, but may be a consequence of sexes being differentially affected by inorganic contaminants. My research demonstrates that the disposal of gold and uranium mine waste has resulted in the accumulation of contaminants by a representative resident vertebrate, and that this accumulation is potentially associated with poorer body condition which might affect fitness. It highlights the potential threat of mining-waste discharges to lizards, shows the need for site remediation measures, and also highlights the need for further investigation into the potential effects of environmental contaminants from gold and uranium mine waste on exposed vertebrates in South Africa.

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Die Vegetationskomposition und –struktur, beispielsweise die unterschiedliche Architektur von Bäumen, Sträuchern, Gräsern und Kräutern, bietet ein großes Spektrum an Habitaten und Nischen, die wiederum eine hohe Tierdiversität in den Savannensystemen des südlichen Afrikas ermöglichen. Dieses Ökosystem wurde jedoch über Jahrzehnte weltweit durch intensive anthropogene Landnutzung (z.B. Viehwirtschaft) nachhaltig verändert. Dabei wurden die Zusammensetzung, Diversität und Struktur der Vegetation stark verändert. Überweidung in Savannensystemen führt zu einer Degradation des Habitates einhergehend mit dem Verlust von perennierenden Gräsern und krautiger Vegetation. Dies führt zu einem Anstieg an vegetationsfreien Bodenflächen. Beides, sowohl der Verlust an perennierenden Gräsern und krautiger Vegetation sowie der Anstieg an vegetationsfreien Flächen führt zu verbesserten Etablierungsbedingungen für Sträucher (z.B. Rhigozum trichotomum, Acacia mellifera) und auf lange Sicht zu stark verbuschten Flächen. Die Tierdiversität in Savannen ist hiervon entscheidend beeinflusst. Mit sinkender struktureller Diversität verringert sich auch die Tierdiversität. Während der Einfluss von Überweidung auf die Vegetation relativ gut untersucht ist sind Informationen über den Einfluss von Überweidung auf die Tierdiversität, speziell für Reptilien, eher spärlich vorhanden. Zusätzlich ist sehr wenig bekannt zum Einfluss auf die Populationsdynamik (z.B. Verhaltensanpassungen, Raumnutzung, Überlebensrate, Sterberate) einzelner Reptilienarten. Ziel meiner Doktorarbeit ist es den Einfluss von Überweidung durch kommerzielle Farmnutzung auf die Reptiliengemeinschaft und auf verschiedene Aspekte der Populationsdynamik der Echse Pedioplanis lineoocellata lineoocellata zu untersuchen. Hinsichtlich bestimmter Naturschutzmaßnahmen ist es einerseits wichtig zu verstehen welchen Auswirkungen Überweidung auf die gesamte Reptiliengemeinschaft hat. Und zum anderen wie entscheidende Faktoren der Populationsdynamik beeinflusst werden. Beides führt zu einem besseren Verständnis der Reaktion von Reptilien auf Habitatdegradation zu erlangen. Die Ergebnisse meiner Doktorarbeit zeigen eindeutig einen negativen Einfluss der Überweidung und der daraus resultierende Habitatdegradation auf (1) die gesamte Reptiliengemeinschaft und (2) auf einzelne Aspekte der Populationsdynamik von P. lineoocellata. Im Teil 1 wird die signifikante Reduzierung der Reptiliendiversität und Abundanz in degradierten Habitaten beschrieben. Im zweiten Teil wird gezeigt, dass P. lineoocellata das Verhalten an die verschlechterten Lebensbedingungen anpassen kann. Die Art bewegt sich sowohl häufiger als auch über einen längeren Zeitraum und legt dabei größere Distanzen zurück. Zusätzlich vergrößerte die Art ihr Revier (home range) (Teil 3). Im abschließenden Teil wird der negative Einfluss von Überweidung auf die Populationsdynamik von P. lineoocellata beschrieben: In degradierten Habitaten nimmt die Populationsgröße von adulten und juvenilen Echsen ab, die Überlebens- und Geburtenrate sinken, währen zusätzlich das Prädationsrisiko ansteigt. Verantwortlich hierfür ist zum einen die ebenfalls reduzierte Nahrungsverfügbarkeit (Arthropoden) auf degradierten Flächen. Dies hat zur Folge, dass die Populationsgröße abnimmt und die Fitness der Individuen verringert wird, welches sich durch eine Reduzierung der Überlebens- und Geburtenrate bemerkbar macht. Und zum anderen ist es die Reduzierung der Vegetationsbedeckung und der Rückgang an perennierenden Gräsern welche sich negativ auswirken. Als Konsequenz hiervon gehen Nischen und Mikrohabitate verloren und die Möglichkeiten der Reptilien zur Thermoregulation sind verringert. Des Weiteren hat dieser Verlust an perennierender Grasbedeckung auch ein erhöhtes Prädationsrisikos zur Folge. Zusammenfassend lässt sich sagen, dass nicht nur Bäume und Sträucher, wie in anderen Studien gezeigt, eine bedeutende Rolle für die Diversität spielen, sondern auch das perennierende Gras eine wichtige Rolle für die Faunendiversität spielt. Weiterhin zeigte sich, dass Habitatdegradation nicht nur die Population als gesamtes beeinflusst, sondern auch das Verhalten und Populationsparameter einzelner Arten. Des Weiteren ist es Reptilien möglich durch Verhaltensflexibilität auf verschlechterte Umweltbedingen zu reagieren. / In semi-arid savannah ecosystems, the vegetation structure and composition, i.e. the architecture of trees, shrubs, grass tussocks and herbaceous plants, offer a great variety of habitats and niches to sustain animal diversity. In the last decades intensive human land use practises like livestock farming have altered the vegetation in savannah ecosystems worldwide. Extensive grazing leads to a reduction of the perennial and herbaceous vegetation cover, which results in an increased availability of bare soil. Both, the missing competition with perennial grasses and the increase of bare soils favour shrub on open ground and lead to area-wide shrub encroachment. As a consequence of the altered vegetation structure and composition, the structural diversity declines. It has been shown that with decreasing structural diversity animal diversity decline across a variety of taxa. Knowledge on the effects of overgrazing on reptiles, which are an important part of the ecosystem, are missing. Furthermore, the impact of habitat degradation on factors of a species population dynamic and life history, e.g., birth rate, survival rate, predation risk, space requirements or behavioural adaptations are poorly known. Therefore, I investigated the impact of overgrazing on the reptile community in the southern Kalahari. Secondly I analysed population dynamics and the behaviour of the Spotted Sand Lizard, Pedioplanis l. lineoocellata. All four chapters clearly demonstrate that habitat degradation caused by overgrazing had a severe negative impact upon (i) the reptile community as a whole and (ii) on population parameters of Pedioplanis l. lineoocellata. Chapter one showed a significant decline of regional reptile diversity and abundance in degraded habitats. In chapter two I demonstrated that P. lineoocellata moves more frequently, spends more time moving and covers larger distances in degraded than in non-degraded habitats. In addition, home range size of the lizard species increases in degraded habitats as shown by chapter three. Finally, chapter four showed the negative impacts of overgrazing on several population parameters of P. lineoocellata. Absolute population size of adult and juvenile lizards, survival rate and birth rate are significantly lower in degraded habitats. Furthermore, the predation risk was greatly increased in degraded habitats. A combination of a variety of aspects can explain the negative impact of habitat degradation on reptiles. First, reduced prey availability negatively affects survival rate, the birth rate and overall abundance. Second, the loss of perennial plant cover leads to a loss of niches and to a reduction of opportunities to thermoregulate. Furthermore, a loss of cover and is associated with increased predation risk. A major finding of my thesis is that the lizard P. lineoocellata can alter its foraging strategy. Species that are able to adapt and change behaviour, such as P. lineoocellata can effectively buffer against changes in their environment. Furthermore, perennial grass cover can be seen as a crucial ecological component of the vegetation in the semi-arid savannah system of the southern Kalahari. If perennial grass cover is reduced to a certain degree reptile diversity will decline and most other aspects of reptile life history will be negatively influenced. Savannah systems are characterised by a mixture of trees, shrubs and perennial grasses. These three vegetation components determine the composition and structure of the vegetation and accordingly influence the faunal diversity. Trees are viewed as keystone structures and focal points of animal activity for a variety of species. Trees supply animals with shelter, shade and food and act as safe sites, nesting sites, observation posts and foraging sites. Recent research demonstrates a positive influence of shrub patches on animal diversity. Moreover, it would seem that intermediate shrub cover can also sustain viable populations in savannah landscapes as has been demonstrated for small carnivores and rodent species. The influence of perennial grasses on faunal diversity did not receive the same attention as the influence of trees and shrubs. In my thesis I didn’t explicitly measure the direct effects of perennial grasses but my results strongly imply that it has an important role. If the perennial grass cover is significantly depleted my results suggest it will negatively influence reptile diversity and abundance and on several populations parameters of P. lineoocellata. Perennial grass cover is associated with the highest prey abundance, reptile diversity and reptile abundance. It provides reptiles both a refuge from predators and opportunities to optimise thermoregulation. The relevance of each of the three vegetation structural elements is different for each taxa and species. In conclusion, I can all three major vegetation structures in the savannah system are important for faunal diversity.

<p>Livestock keeping has been the essential source of livelihood in Babati District for many hundreds of years. The traditional ecological knowledge about this semi-arid environment has influenced the general view on livestock management. This essay discusses the measures that are, or could be taken in Babati District to prevent overstocking and overgrazing in the woodlands. With the continuing population density increase also the livestock population grows. More houses and roads are built and the grazing lands diminish. To avoid overgrazing forest management programmes restrict grazing in forests. This additionally decreases availability of grazing land. My conclusion is that minimizing number of livestock is necessary to not exceed carrying capacity of pasture during drought. Hence this is not free from problems since it is traditionally rooted to have a large number of livestock as a buffer of energy and wealth. One solution for both how to prevent overstocking and how to survive with small number of livestock is to practise zero-grazing. Zero-grazing is to keep a small number of healthy big cattle e.g. exotic cows or crossbreeds in stables or tied up. However, when tying cattle on the spot the fact that cattle have four legs is disregarded.</p>

Livestock keeping has been the essential source of livelihood in Babati District for many hundreds of years. The traditional ecological knowledge about this semi-arid environment has influenced the general view on livestock management. This essay discusses the measures that are, or could be taken in Babati District to prevent overstocking and overgrazing in the woodlands. With the continuing population density increase also the livestock population grows. More houses and roads are built and the grazing lands diminish. To avoid overgrazing forest management programmes restrict grazing in forests. This additionally decreases availability of grazing land. My conclusion is that minimizing number of livestock is necessary to not exceed carrying capacity of pasture during drought. Hence this is not free from problems since it is traditionally rooted to have a large number of livestock as a buffer of energy and wealth. One solution for both how to prevent overstocking and how to survive with small number of livestock is to practise zero-grazing. Zero-grazing is to keep a small number of healthy big cattle e.g. exotic cows or crossbreeds in stables or tied up. However, when tying cattle on the spot the fact that cattle have four legs is disregarded.

O sobrepastejo é a principal causa de degradação das pastagens naturais, resultando na diminuição do potencial produtivo e consequente capacidade de suporte desses campos, além da substituição da vegetação natural por espécies de menor valor forrageiro. A exclusão temporária do pastejo é uma ferramenta que pode contribuir para a recuperação ambiental e da capacidade produtiva das pastagens degradadas. Esta ferramenta, além de proporcionar o crescimento da biomassa aérea das plantas, permitindo que espécies de alto valor forrageiro se reproduzam, pode influenciar características importantes na biomassa subterrânea que envolve sequestro de carbono e melhoria nas características do solo. Neste trabalho buscamos compreender as relações entre o sistema radicular das pastagens naturais e a biomassa aérea, com a hipótese de que o diferimento, além de promover a recuperação de áreas degradadas pelo sobrepastejo via acúmulo de pasto e aumento da cobertura do solo, aumenta também a biomassa de estruturas subterrâneas. Foram aplicados três tratamentos de diferimentos: diferimento de primavera (DP), diferimento de outono (DO) e não diferido (ND) em duas áreas com histórico de intensidade de pastejo contrastantes 4% (4 kg de MS para cada 100 kg PV) e 8-12% (8 kg de MS para cada 100 kg de PV na primavera e 12 kg de MS para cada 100 kg de PV no restante do ano) avaliados por dois anos consecutivos. A biomassa de raízes (Braíz) foi maior no primeiro ano de avaliações no 4% e no 8-12% nos períodos pós DP e no 4% nas avaliações pós DO. A biomassa de rizomas (Briz) foi maior nos diferimentos (DP e DO) quando comparados isoladamente com o não diferido (ND) no 4%, no segundo ano pós DP para o 8-12% e foi maior para o DP no efeito cumulativo dos dois anos. A (Bsubt) também foi maior no primeiro ano de avaliação somente no 4%. A relação da biomassa aérea/subterrânea (R:A/S) foi maior nos diferimento de primavera (DP) e outono (DO) no ambiente com OF 4% nas comparações com o não diferido (ND) nos dois anos de avaliações e o DP apresentou uma melhor resposta cumulativa. O diferimento aplicado em período favorável ao crescimento vegetal proporciona aumento da biomassa aérea e, em ambientes com longo histórico de sobrepastejo, pode aumentar a biomassa de rizomas contribuindo para a maior cobertura vegetal de espécies que apresentam esse tipo de estrutura subterrânea. / The overgrazing is the main cause of degradation of rangelands, resulting in decreased production potential and consequently carrying capacity of these fields in addition to the replacement of natural vegetation by species of lower feed value. The temporary grazing exclusion is a tool that can contribute to environmental recovery and the productive capacity of degraded pastures. This tool, in addition to providing the growth of the biomass plant, allowing species of high forage value to breed, can influence important features in the underground biomass involving carbon sequestration and improved soil characteristics. This study aims to understand the relationship between the root system of natural pastures and biomass, with the hypothesis that the deferral, and promote the recovery of degraded areas by overgrazing pasture via accumulation and increased soil cover, also increases biomass underground structures. Deferrals three treatments were applied: spring deferral (DP), autumn deferral (DO) and not deferred (ND) in two areas with contrasting grazing intensity of historical 4% (4 kg DM per 100 kg BW) and 8-12% (8 kg DM per 100 kg of body weight in the spring and 12 kg DM per 100 kg of body weight in the rest of the year) evaluated for two consecutive years. The root biomass (Braíz) was higher in the first year of evaluations at 4%, and 8-12% in post DP periods and 4% in after THE assessments. The biomass of rhizomes (Briz) was higher in deferrals (DP and DO) compared alone with no deferred (ND) at 4% and was higher in the DP in the cumulative effect of two years. The (Bsubt) was also higher in the first year of assessment only 4%. The ratio of aboveground / underground biomass (R: A/S) was higher in spring deferral (DP) and autumn (DO) in the environment with OF 4% in comparison with the non-deferred (ND) in the two years of reviews and the DP showed better cumulative response. The deferral applied in good times to plant growth provides increased biomass and, in environments with long history of overgrazing, can increase the biomass of rhizomes contributing to higher vegetation species that exhibit this type of underground structure.

O sobrepastejo é a principal causa de degradação das pastagens naturais, resultando na diminuição do potencial produtivo e consequente capacidade de suporte desses campos, além da substituição da vegetação natural por espécies de menor valor forrageiro. A exclusão temporária do pastejo é uma ferramenta que pode contribuir para a recuperação ambiental e da capacidade produtiva das pastagens degradadas. Esta ferramenta, além de proporcionar o crescimento da biomassa aérea das plantas, permitindo que espécies de alto valor forrageiro se reproduzam, pode influenciar características importantes na biomassa subterrânea que envolve sequestro de carbono e melhoria nas características do solo. Neste trabalho buscamos compreender as relações entre o sistema radicular das pastagens naturais e a biomassa aérea, com a hipótese de que o diferimento, além de promover a recuperação de áreas degradadas pelo sobrepastejo via acúmulo de pasto e aumento da cobertura do solo, aumenta também a biomassa de estruturas subterrâneas. Foram aplicados três tratamentos de diferimentos: diferimento de primavera (DP), diferimento de outono (DO) e não diferido (ND) em duas áreas com histórico de intensidade de pastejo contrastantes 4% (4 kg de MS para cada 100 kg PV) e 8-12% (8 kg de MS para cada 100 kg de PV na primavera e 12 kg de MS para cada 100 kg de PV no restante do ano) avaliados por dois anos consecutivos. A biomassa de raízes (Braíz) foi maior no primeiro ano de avaliações no 4% e no 8-12% nos períodos pós DP e no 4% nas avaliações pós DO. A biomassa de rizomas (Briz) foi maior nos diferimentos (DP e DO) quando comparados isoladamente com o não diferido (ND) no 4%, no segundo ano pós DP para o 8-12% e foi maior para o DP no efeito cumulativo dos dois anos. A (Bsubt) também foi maior no primeiro ano de avaliação somente no 4%. A relação da biomassa aérea/subterrânea (R:A/S) foi maior nos diferimento de primavera (DP) e outono (DO) no ambiente com OF 4% nas comparações com o não diferido (ND) nos dois anos de avaliações e o DP apresentou uma melhor resposta cumulativa. O diferimento aplicado em período favorável ao crescimento vegetal proporciona aumento da biomassa aérea e, em ambientes com longo histórico de sobrepastejo, pode aumentar a biomassa de rizomas contribuindo para a maior cobertura vegetal de espécies que apresentam esse tipo de estrutura subterrânea. / The overgrazing is the main cause of degradation of rangelands, resulting in decreased production potential and consequently carrying capacity of these fields in addition to the replacement of natural vegetation by species of lower feed value. The temporary grazing exclusion is a tool that can contribute to environmental recovery and the productive capacity of degraded pastures. This tool, in addition to providing the growth of the biomass plant, allowing species of high forage value to breed, can influence important features in the underground biomass involving carbon sequestration and improved soil characteristics. This study aims to understand the relationship between the root system of natural pastures and biomass, with the hypothesis that the deferral, and promote the recovery of degraded areas by overgrazing pasture via accumulation and increased soil cover, also increases biomass underground structures. Deferrals three treatments were applied: spring deferral (DP), autumn deferral (DO) and not deferred (ND) in two areas with contrasting grazing intensity of historical 4% (4 kg DM per 100 kg BW) and 8-12% (8 kg DM per 100 kg of body weight in the spring and 12 kg DM per 100 kg of body weight in the rest of the year) evaluated for two consecutive years. The root biomass (Braíz) was higher in the first year of evaluations at 4%, and 8-12% in post DP periods and 4% in after THE assessments. The biomass of rhizomes (Briz) was higher in deferrals (DP and DO) compared alone with no deferred (ND) at 4% and was higher in the DP in the cumulative effect of two years. The (Bsubt) was also higher in the first year of assessment only 4%. The ratio of aboveground / underground biomass (R: A/S) was higher in spring deferral (DP) and autumn (DO) in the environment with OF 4% in comparison with the non-deferred (ND) in the two years of reviews and the DP showed better cumulative response. The deferral applied in good times to plant growth provides increased biomass and, in environments with long history of overgrazing, can increase the biomass of rhizomes contributing to higher vegetation species that exhibit this type of underground structure.

O sobrepastejo é a principal causa de degradação das pastagens naturais, resultando na diminuição do potencial produtivo e consequente capacidade de suporte desses campos, além da substituição da vegetação natural por espécies de menor valor forrageiro. A exclusão temporária do pastejo é uma ferramenta que pode contribuir para a recuperação ambiental e da capacidade produtiva das pastagens degradadas. Esta ferramenta, além de proporcionar o crescimento da biomassa aérea das plantas, permitindo que espécies de alto valor forrageiro se reproduzam, pode influenciar características importantes na biomassa subterrânea que envolve sequestro de carbono e melhoria nas características do solo. Neste trabalho buscamos compreender as relações entre o sistema radicular das pastagens naturais e a biomassa aérea, com a hipótese de que o diferimento, além de promover a recuperação de áreas degradadas pelo sobrepastejo via acúmulo de pasto e aumento da cobertura do solo, aumenta também a biomassa de estruturas subterrâneas. Foram aplicados três tratamentos de diferimentos: diferimento de primavera (DP), diferimento de outono (DO) e não diferido (ND) em duas áreas com histórico de intensidade de pastejo contrastantes 4% (4 kg de MS para cada 100 kg PV) e 8-12% (8 kg de MS para cada 100 kg de PV na primavera e 12 kg de MS para cada 100 kg de PV no restante do ano) avaliados por dois anos consecutivos. A biomassa de raízes (Braíz) foi maior no primeiro ano de avaliações no 4% e no 8-12% nos períodos pós DP e no 4% nas avaliações pós DO. A biomassa de rizomas (Briz) foi maior nos diferimentos (DP e DO) quando comparados isoladamente com o não diferido (ND) no 4%, no segundo ano pós DP para o 8-12% e foi maior para o DP no efeito cumulativo dos dois anos. A (Bsubt) também foi maior no primeiro ano de avaliação somente no 4%. A relação da biomassa aérea/subterrânea (R:A/S) foi maior nos diferimento de primavera (DP) e outono (DO) no ambiente com OF 4% nas comparações com o não diferido (ND) nos dois anos de avaliações e o DP apresentou uma melhor resposta cumulativa. O diferimento aplicado em período favorável ao crescimento vegetal proporciona aumento da biomassa aérea e, em ambientes com longo histórico de sobrepastejo, pode aumentar a biomassa de rizomas contribuindo para a maior cobertura vegetal de espécies que apresentam esse tipo de estrutura subterrânea. / The overgrazing is the main cause of degradation of rangelands, resulting in decreased production potential and consequently carrying capacity of these fields in addition to the replacement of natural vegetation by species of lower feed value. The temporary grazing exclusion is a tool that can contribute to environmental recovery and the productive capacity of degraded pastures. This tool, in addition to providing the growth of the biomass plant, allowing species of high forage value to breed, can influence important features in the underground biomass involving carbon sequestration and improved soil characteristics. This study aims to understand the relationship between the root system of natural pastures and biomass, with the hypothesis that the deferral, and promote the recovery of degraded areas by overgrazing pasture via accumulation and increased soil cover, also increases biomass underground structures. Deferrals three treatments were applied: spring deferral (DP), autumn deferral (DO) and not deferred (ND) in two areas with contrasting grazing intensity of historical 4% (4 kg DM per 100 kg BW) and 8-12% (8 kg DM per 100 kg of body weight in the spring and 12 kg DM per 100 kg of body weight in the rest of the year) evaluated for two consecutive years. The root biomass (Braíz) was higher in the first year of evaluations at 4%, and 8-12% in post DP periods and 4% in after THE assessments. The biomass of rhizomes (Briz) was higher in deferrals (DP and DO) compared alone with no deferred (ND) at 4% and was higher in the DP in the cumulative effect of two years. The (Bsubt) was also higher in the first year of assessment only 4%. The ratio of aboveground / underground biomass (R: A/S) was higher in spring deferral (DP) and autumn (DO) in the environment with OF 4% in comparison with the non-deferred (ND) in the two years of reviews and the DP showed better cumulative response. The deferral applied in good times to plant growth provides increased biomass and, in environments with long history of overgrazing, can increase the biomass of rhizomes contributing to higher vegetation species that exhibit this type of underground structure.