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A molecular phylogenetic assessment of Oxalis L. section Angustatae subsection Lineares using trnL-trnF sequence dataOberlander, Kenneth 03 1900 (has links)
Thesis (MSc)--Stellenbosch University, 2003. / ENGLISH ABSTRACT: The phylogenetic relationships and taxonomic status of South African Oxalis L.
species are highly unresolved, both regionally and with regard to precise placement
within the genus as a whole. Studies based exclusively on morphological and
palynological characteristics have hitherto proved only partially successful in
resolving natural groupings among the indigenous taxa of the region. Recent studies
involving a few native taxa have indicated the plastid trnL-trnF non-coding DNA
region as useful for the purposes of reconstructing phylogenetic relationships within
the genus. The present study addressed the taxonomic monophyly and relationships of
the highly unresolved section Angustatae subsection Lineares, using DNA sequence
data.
The phylogenetic reconstruction of southern African Oxalis species renders five of
the subsections of section Angustatae sensu Salter (1944) polyphyletic, three of them
conclusively so. The members of subsection Lineares are split between three clades,
two of them with strong bootstrap support. None of these three clades consists
exclusively of species of subsection Lineares. Likewise four of the seven assemblages
of related taxa within subsection Lineares sensu Salter (1944) are not retrieved as
monophyletic. Pollen data sensu Dreyer (1996) supports the clades retrieved in this
study, whereas very few morphological characters could be plotted as potential
synapomorphies for these clades. The resultant phylogenetic reconstruction thus
supports palynological data of this subsection, and indicates the urgent need for a
revision of the current morphological classification of Salter (1944). / AFRIKAANSE OPSOMMING: Die filogenetiese verwantskappe en taksonomiese klassifikasie van Suid
Afrikaanse Oxalis L. spesies is nog baie onduidelik, beide binne die gebied en ten
opsigte van die presiese plasing binne die genus as 'n geheel. Vorige werk, uitsluitlik
gebaseer op morfologiese en palinologiese kenmerke, was tot dusver nog net
gedeeltelik suksesvol in die identifikasie van natuurlike groepe binne die inheemse
taksa van die gebied. Onlangse studies op 'n paar inheemse spesies het die nut van die
plastied trnL-trnF nie-koderende DNA area bevestig vir die rekonstruksie van
filogenetiese verwantskappe in die genus. Hierdie studie is gerig op die taksonomiese
monofilie en verwantskappe van die onnatuurlike seksie Angustatae subseksie
Lineares, deur gebruik te maak van DNA basis-volgorde data.
Die filogenetiese rekonstruksie van Suid Afrikaanse Oxalis spesies dui aan dat vyf
van die subseksies van seksie Angustatae sensu Salter (1944) polifileties is, met sterk
steun daarvoor dat drie van hulle onnatuurlik is. Die lede van subseksie Lineares is
tussen drie verskillende groepe versprei; twee van dié groepe het sterk ondersteuning.
Nie een van die drie groepe bestaan uitsluitlik uit spesies van subseksie Lineares nie.
So ook is vier van die sewe groepe van verwante spesies binne subseksie Lineares
sensu Salter (1944) polifileties. Stuifmeel data volgens Dreyer (1996) ondersteun die
groepe wat deur die DNA volgordes uitgewys is, terwyl baie min morfologiese
kenmerke gebruik kan word as potensiële sinapomorfe/kenmerke. Die filogenetiese
rekonstruksie ondersteun dus die palinologiese data van die subseksie, en dui op die
dringende behoefte aan 'n hersiening van die huidige morfologiese klassifikasie van
Salter (1944).
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Taxonomic assessment of O. furcillata (Oxalidaceae)Bissiengou, Pulcherie 12 1900 (has links)
Thesis (MSc (Botany and Zoology))--University of Stellenbosch, 2005. / The family Oxalidaceae has a worldwide distribution, but is most common in tropical
and subtropical regions. Oxalis L. is the largest genus of the family comprising ca.
800 of the 900 species. Oxalis species are annual or perennial herbs or rarely
subshrubs or trees. The current study assesses on the taxonomic placement of
O. furcillata Salter. Currently this species, comprising two varieties, O. furcillata var.
furcillata and O. furcillata var. caulescens Salter, is placed in section Foveolatae.
Members of this section have endospermous seeds and fleshy leaflets. However, both
in terms of leaf morphological and seed characters the two varieties of this species
appear to be misplaced within this section. In addition O. furcillata var. caulescens
has a unique pollen type, different from both the typical variety and the rest of the
section. Both lines of evidence thus suggest that O. furcillata var. caulescens may be
misplaced within this section. The present study thus sets out to assess the placement
of O. furcillata in general, and the placement of O. furcillata var. caulescens in
particular. A multi-disciplinary approach was followed, which included analyses of
macro-morphological (including LM and SEM analyses), biogeographical and
palynological characters. The variability of quantitative characters was assessed using
the STATISTICA 6.0 software package. Leaf dimensions, plant height, bulb length,
petiole length and palynology showed sufficient differences between the two taxa to
confirm the separate identity of these two varieties as separate species. O. furcillata
var. caulescens was thus raised to specific status as O. caulescens (Salter) Bissiengou.
The results suggest two different options in terms of the taxonomic placement of the
species O. furcillata and O. caulescens. They can either remain in section Foveolatae,
best placed near O. senecta and O. densa or may moved to the highly variable section
Latifoliolatae. But retaining them within the section Foveolatae appeared to be the
better alternative. The correct position will be established both through further
morphological analyses and correlation to the trnL-F and ITS sequence-based
phylogeny of the southern African members of Oxalis.
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