No description available.

The intensification of freshwater aquaculture worldwide has facilitated the propagation of the parasitic ciliate protozoan Ichthyophthirius multifiliis Fouquet, 1876 commonly known as “fish white spot” or “Ich”. Ichthyophthirius multifiliis infections lead to high mortalities, generating significant economic losses in most cultured freshwater fish species worldwide. Until recently, malachite green was the chemical treatment traditionally used to control I. multifiliis infections. Its reclassification as carcinogenic to humans and its subsequent ban for use in food fish has left the industry without any suitable treatments. Currently, in-bath formaldehyde and sodium chloride treatments are the most common option used in farm systems to control I. multifliis infections. Given their low efficacy, however, they are not considered as sustainable long–term options. There is, therefore, an urgent necessity to find efficacious alternatives for controlling I. multifliis infections. The general aim of this research project was to improve the management of I. multifiliis infections in order to develop more comprehensive, environmentally friendly and sustainable therapeutic strategies for use in freshwater food fish aquaculture. The present PhD-thesis present first a literature review chapter providing an overview and critical assessment of chemotherapeutants and physical interventions tested within the last 30 years against I. multifiliis infections. The experimental worked consisted of a number of in vitro and in vivo trials were conducted using experimental scale flow-through, static tank systems and commercial scale raceways within a rainbow trout hatchery, in addition to molecular work on different isolates of the parasite. The results of this research are organised into three experimental chapters which describe the testing of chemical and non-chemical treatments against I. multifiliis infections and work undertaken to determine the most suitable molecular markers to identify I. multifiliis isolates. In the first experimental chapters, the possibility of efficiently controlling I. multifliis infections through the administration of novel environmentally-friendly chemical treatments (e.g. bronopol and peracetic acid-based products) was investigated. The results clearly showed that bronopol and peractic acid-based products have a strong biocidal/cytotoxic effect against all free-living stages of I. multifiliis (e.g. tomonts, cysts and theronts). The administration of high concentrations of bronopol (e.g. 20, 50 and 100 mg L-1) over short periods of exposure (e.g. 30 min) significantly reduced the survival of tomonts, cysts and theronts and delayed the development of I. multifiliis tomonts and cysts. Prolonged low concentrations of bronopol (e.g. 1 mg L-1) greatly reduced the survival of infective theronts, although such treatment did not affect the ability of surviving theronts to subsequently infect a host. When tested in vivo, the continuous prolonged exposure (e.g. 27 days) of low concentrations of bronopol (e.g. 2 and 5 mg L-1) had an impact on the population dynamics of I. multifiliis, this being demonstrated by a significant reduction in the number of trophonts developing within the fish. Low concentrations of bronopol (e.g. 2 mg L-1) administrated as a preventive treatment prior to infection also proved to be very successful at reducing the colonisation success of I. multifiliis. Peracetic acid administrated at low concentrations (e.g. 8, 12 and 15 mg L-1) over a short window of exposure (e.g. 1 h) displayed a strong biocidal effect against all the free-living stages of I. multifiliis (e.g. tomonts, cysts and theronts). The bronopol and peracetic acid-based products tested here both appear to be capable of disrupting the development of the cyst stage of I. multifiliis which is seldom reported for chemotherapeutants currently used against this parasite. These results suggest that bronopol and peracetic acid-based products have a place in the arsenal of treatment options for controlling I. multifiliis infections in commercial aquaculture systems. The use of a mechanical device or a biological control agent to remove the cyst stage of I. multifiliis and the impact of such control on the population dynamics and the levels of infection of fish were also investigated. The results revealed that tomonts preferentially settle and encyst on the base of culture systems and on biofilm–covered substrates. The survival of the tomont stage is greatly affected by the composition of the substrate upon which it settles and is significantly lower on polypropylene-based plastic. The lining of raceways in a commercial rainbow trout hatchery with a low-adhesion polymer created a smooth surface facilitating the dislodgement and elimination of the cyst stage of I. multifilis by natural flushing or brushing. The physical removal of the cyst stage alone, through the use of a mechanical device or substrate detrivorous/algae feeder as a biological control agent, significantly reduced the propagation of I. multifiliis to a low level of infection without the need to deploy an additional chemical treatment. These studies demonstrate that the cyst is a key stage in the dynamics of I. multifiliis infection and its removal from the fish culture systems could constitute an effective and simple mean of managing I. multifiliis infections. The third experimental chapter explores the utilisation of molecular marker to characterise different isolates of I. multifiliis. The results highlight the unsuitability of the rDNA region (ITS-1 and ITS-2) and the strong potential of the mtDNA (COI) as molecular markers to discriminate isolates of I. multifiliis from distant geographical locations. It is suggested that genetic “barcoding” using mtDNA is the most effective method to identify I. multifiliis isolates. Importantly, genetic “barcoding” could allow associating I. multifiliis strains or geographical isolates with particular properties as regards their ecophysiology, pathogenicity and sensitivity to treatment, in order to improve the management of I. multifiliis infections according to the specific genetic isolate encountered. This research project demonstrates the efficacy of a range of new approaches against the propagation of I. multifiliis. Together, our findings contribute towards the development of a more effective and integrated system for managing I. multifliis infections in farm systems. The utilisation of physical methods and of environmentally friendly chemotherapeutants holds great potential for the control of I. multifiliis infections in organic fish production and in a broader context to any freshwater food fish farms affected by I. multifiliis.

As leishmanioses são doenças parasitárias causadas por protozoários do gênero Leishmania e são importante problema de saúde pública. A leishmaniose cutânea americana é considerada doença autóctone do continente americano e se apresenta com diversas formas clínicas, que dependem da espécie que causa a infecção e de outros fatores como virulência e capacidade de evasão do sistema immune. São reconhecidas seis espécies de Leishmania que causam casos humanos de LCA no Brasil, destas, cinco pertencem ao subgênero Viannia e uma ao subgênero Leishmania. Elas são: Leishmania (Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) lainsoni, Leishmania (Viannia) shawi, Leishmania (Viannia) naiffi e a Leishmania (Leishmania) amazonensis. A transmissão da leishmaniose cutânea se mantém na região do Pontal da Paranapanema, com 20 casos notificados em 2006. A Leishmania (V.) braziliensis é a única espécie considerada como agente da doença na região, com identificação dos vetores envolvidos e de possíveis reservatórios silvestres. O objetivo do trabalho é o estudo dos aspectos epidemiológicos, clínicos e histopatológicos da leishmaniose cutânea no Pontal do Paranapanema e a identificação, por métodos moleculares, PCR, do agente etiológico e a caracterização do gênero, subgênero e a espécie de Leishmania presentes na região. A doença foi encontrada em ambos os sexos, predominando no sexo masculino (67,9%), em todas as faixas etárias, mas 70,5% estavam na faixa de 20 a 49 anos de idade. A forma clínica mais encontrada foi a cutânea, com 92,3% dos casos. A pesquisa de parasita na lesão em 78 pacientes que realizaram biópsias foi positiva em 40 amostras (51.3%), em lâminas coradas pela HE; quando se utilizou a IH foi 66,7%. O índice de concordância entre as técnicas da HE e IH foi de 58,97%. Entretanto, 10 casos negativos na IH foram positivos na HE, e de 38 casos negativos na HE, 22 foram positivos na IH. Isto mostra que há necessidade de associação dos dois métodos. A positividade na PCR foi de 53,8%. Avaliando-se os resultados obtidos nesse estudo, podemos verificar que dos 40 casos positivos pela HE, 24 também foram positivos pela PCR; porém, 16 destes, foram negativos pela PCR. Em contrapartida, das 38 amostras negativas na HE, 18 delas foram positivas pela PCR. Pela imunohistoquímica, do total de 26 amostras negativas, apenas 12 permaneceram negativas e 14 foram positivas na PCR; enquanto que, das 52 amostras positivas pela IH, 28 foram positivas e 24 negativas pela PCR. Os níveis de concordância da PCR com HE foram de 56,41% e da PCR com IH de 51,28%. Esses resultados reforçam a idéia da necessidade de se associar os três métodos para o diagnóstico da LC. As características das lesões histopatológicas foram: reação granulomatosa (RG) encontradas em 71,85%, reação granulomatosa com células gigantes (RGCG) em 12,8%, reação granulomatosa com necrose (RGN) em 10,3% e reação granulomatosa com necrose e células gigantes (RGNCG) em 5,1% dos casos. Utilizando-se os primers SSU rDNA S17/S18, foi possível caracterizar, através do seqüenciamento, 27 (34,6%) amostras como sendo do subgênero Viannia e 06 amostras como L. (L.) amazonensis. Este estudo identificou o primeiro caso de L. (L.) amazonensis na região / Leishmaniasis are parasitic diseases caused by protozoans of the Leishmania genus and are important public health problems. American cutaneous leishmaniasis (ACL) is considered an autochthonous disease of the American continent and presents several clinical forms which depend on the causative species of the infection and other factors such as virulence and ability to evade the immune system. Six Leishmania species are recognized to cause human ACL cases in Brazil of which five belong to the Viannia and one to the Leishmania subspecies. They are: Leishmania (Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) lainsoni, Leishmania (Viannia) shawi, Leishmania (Viannia) naiffi and Leishmania (Leishmania) amazonensis. Cutaneous leishmaniasis transmission is maintained in the Pontal do Paranapanema region, with 20 notified cases in 2006. Leishmania (V.) braziliensis is the only species considered to be the disease agent in the region with identification of the involved vectors and possible wild reservoirs. The aim of this research is the studies of the epidemiological, clinical and histopathological aspects of cutaneous leishmaniasis in the Pontal do Paranapanema and the identification by molecular methods, PCR, of the etiologic agent and characterization of the Leishmania genus, subgenus and species present in the region. The disease was found in both genders, with predominance of males (67.9%), in all age ranges, but 70.5% were in the range of 20 to 49 years. The cutaneous was the mostly found clinical form with 92.3% of the cases. Search for the parasite in the lesion of 78 patients who underwent biopsies was positive in 40 samples (51.5%), in HE stained slides; when IH was used, 66.7% were positive. Agreement index between the HE and IH techniques were 58.97%. However, 10 negative cases using IH were positive with HE, and of 38 HE negative cases 22 were positive using IH. This shows that association of the two methods is needed. Using PCR, there was a positivity of 53.8%. Evaluating the results obtained in this study, we may observe that of the 40 HE positive cases 24 were also positive on PCR; but 16 of these were PCR negative. Contrariwise, of the 38 HE negative samples 18 were positive PCR. Using immunohistochemistry, of the total of 38 HE negative samples, 18 were positive with PCR; while of the 52 IH positive samples, 28 were positive and 24 negative on PCR. Agreement levels of PCR with HE were 56.41%, and of PCR with IH 51.28%. These results reinforce the idea of the need for association of the three methods for CL diagnosis. Histopathological lesion characteristics were: granulomatous reaction (GR) found in 71.85%, granulomatous reaction with giant cells (GRGC) in 12.8T, granulomatous reaction with necrosis (GRN) in 10.3% and granuloma with necrosis and giant cells (GRNGC) in 5.1% of the cases. Using SSU rDNAS 17/S18 primers it was possible to characterize through sequencing 27 (34.6%) samples as being of the Viannia subgenus and 06 samples of the L. (L.).amazonensis This study identified the first L. (L.) amazonensis case in the region

As leishmanioses são doenças parasitárias causadas por protozoários do gênero Leishmania e são importante problema de saúde pública. A leishmaniose cutânea americana é considerada doença autóctone do continente americano e se apresenta com diversas formas clínicas, que dependem da espécie que causa a infecção e de outros fatores como virulência e capacidade de evasão do sistema immune. São reconhecidas seis espécies de Leishmania que causam casos humanos de LCA no Brasil, destas, cinco pertencem ao subgênero Viannia e uma ao subgênero Leishmania. Elas são: Leishmania (Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) lainsoni, Leishmania (Viannia) shawi, Leishmania (Viannia) naiffi e a Leishmania (Leishmania) amazonensis. A transmissão da leishmaniose cutânea se mantém na região do Pontal da Paranapanema, com 20 casos notificados em 2006. A Leishmania (V.) braziliensis é a única espécie considerada como agente da doença na região, com identificação dos vetores envolvidos e de possíveis reservatórios silvestres. O objetivo do trabalho é o estudo dos aspectos epidemiológicos, clínicos e histopatológicos da leishmaniose cutânea no Pontal do Paranapanema e a identificação, por métodos moleculares, PCR, do agente etiológico e a caracterização do gênero, subgênero e a espécie de Leishmania presentes na região. A doença foi encontrada em ambos os sexos, predominando no sexo masculino (67,9%), em todas as faixas etárias, mas 70,5% estavam na faixa de 20 a 49 anos de idade. A forma clínica mais encontrada foi a cutânea, com 92,3% dos casos. A pesquisa de parasita na lesão em 78 pacientes que realizaram biópsias foi positiva em 40 amostras (51.3%), em lâminas coradas pela HE; quando se utilizou a IH foi 66,7%. O índice de concordância entre as técnicas da HE e IH foi de 58,97%. Entretanto, 10 casos negativos na IH foram positivos na HE, e de 38 casos negativos na HE, 22 foram positivos na IH. Isto mostra que há necessidade de associação dos dois métodos. A positividade na PCR foi de 53,8%. Avaliando-se os resultados obtidos nesse estudo, podemos verificar que dos 40 casos positivos pela HE, 24 também foram positivos pela PCR; porém, 16 destes, foram negativos pela PCR. Em contrapartida, das 38 amostras negativas na HE, 18 delas foram positivas pela PCR. Pela imunohistoquímica, do total de 26 amostras negativas, apenas 12 permaneceram negativas e 14 foram positivas na PCR; enquanto que, das 52 amostras positivas pela IH, 28 foram positivas e 24 negativas pela PCR. Os níveis de concordância da PCR com HE foram de 56,41% e da PCR com IH de 51,28%. Esses resultados reforçam a idéia da necessidade de se associar os três métodos para o diagnóstico da LC. As características das lesões histopatológicas foram: reação granulomatosa (RG) encontradas em 71,85%, reação granulomatosa com células gigantes (RGCG) em 12,8%, reação granulomatosa com necrose (RGN) em 10,3% e reação granulomatosa com necrose e células gigantes (RGNCG) em 5,1% dos casos. Utilizando-se os primers SSU rDNA S17/S18, foi possível caracterizar, através do seqüenciamento, 27 (34,6%) amostras como sendo do subgênero Viannia e 06 amostras como L. (L.) amazonensis. Este estudo identificou o primeiro caso de L. (L.) amazonensis na região / Leishmaniasis are parasitic diseases caused by protozoans of the Leishmania genus and are important public health problems. American cutaneous leishmaniasis (ACL) is considered an autochthonous disease of the American continent and presents several clinical forms which depend on the causative species of the infection and other factors such as virulence and ability to evade the immune system. Six Leishmania species are recognized to cause human ACL cases in Brazil of which five belong to the Viannia and one to the Leishmania subspecies. They are: Leishmania (Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) lainsoni, Leishmania (Viannia) shawi, Leishmania (Viannia) naiffi and Leishmania (Leishmania) amazonensis. Cutaneous leishmaniasis transmission is maintained in the Pontal do Paranapanema region, with 20 notified cases in 2006. Leishmania (V.) braziliensis is the only species considered to be the disease agent in the region with identification of the involved vectors and possible wild reservoirs. The aim of this research is the studies of the epidemiological, clinical and histopathological aspects of cutaneous leishmaniasis in the Pontal do Paranapanema and the identification by molecular methods, PCR, of the etiologic agent and characterization of the Leishmania genus, subgenus and species present in the region. The disease was found in both genders, with predominance of males (67.9%), in all age ranges, but 70.5% were in the range of 20 to 49 years. The cutaneous was the mostly found clinical form with 92.3% of the cases. Search for the parasite in the lesion of 78 patients who underwent biopsies was positive in 40 samples (51.5%), in HE stained slides; when IH was used, 66.7% were positive. Agreement index between the HE and IH techniques were 58.97%. However, 10 negative cases using IH were positive with HE, and of 38 HE negative cases 22 were positive using IH. This shows that association of the two methods is needed. Using PCR, there was a positivity of 53.8%. Evaluating the results obtained in this study, we may observe that of the 40 HE positive cases 24 were also positive on PCR; but 16 of these were PCR negative. Contrariwise, of the 38 HE negative samples 18 were positive PCR. Using immunohistochemistry, of the total of 38 HE negative samples, 18 were positive with PCR; while of the 52 IH positive samples, 28 were positive and 24 negative on PCR. Agreement levels of PCR with HE were 56.41%, and of PCR with IH 51.28%. These results reinforce the idea of the need for association of the three methods for CL diagnosis. Histopathological lesion characteristics were: granulomatous reaction (GR) found in 71.85%, granulomatous reaction with giant cells (GRGC) in 12.8T, granulomatous reaction with necrosis (GRN) in 10.3% and granuloma with necrosis and giant cells (GRNGC) in 5.1% of the cases. Using SSU rDNAS 17/S18 primers it was possible to characterize through sequencing 27 (34.6%) samples as being of the Viannia subgenus and 06 samples of the L. (L.).amazonensis This study identified the first L. (L.) amazonensis case in the region