Ce sujet de recherche vise mieux comprendre les processus de bio remédiation qui participent à la réduction des charges en polluants dans les écosystèmes aquatiques du type zones humides, en tant que question d'actualité en ingénierie écologique. L'efficacité des processus de phytoremédiation a été largement démontrée par des applications individuelles sur le sol et les sédiments. Cette thèse a pour objectif de démontrer la participation d'une population d'invertébrés dans l'efficacité de la réduction de polluants des sédiments aquatiques en combinant le processus de bioturbation avec la phytoremédiation. Les hypotheses de recherche ont été testée expérimentalement en conditions de laboratoire à l'aide d'une série de microcosmes reproduisant chacun une portion d'interface eau/ sédiments similaire aux conditions en zones humides. Dans nos expériences, la bioturbation est réalisée par une population d'oligochètes Tubificidae bien connue comme un ingénieur écologique. La phytoremédiation associée est effectuée par une plante aquatique Typha latifolia connue pour sa capacité à extraire les polluants organiques et inorganiques des sédiments par l'accumulation dans leur biomasse. L'influence de cette biodiversité sur les flux et bilan de masse de polluants modèles, a été démontré à l'aide de 2 expériences de laboratoire mettant en oeuvre des séries de microcosmes contaminées avec du Cadmium en tant que métal trace avec une concentration initiale de 20 µg.L-1, dans l'eau surnageante, et de l'atrazine marquée avec une concentration de 5 µg.g-1 de sédiment frais en tant que micropolluant organique persistant et herbicide. Les résultats de ces expériences démontrent que le bio-transport créé par la population de tubificidae ainsi que la bioremédiation sont toujours actifs en présence de contamination ce qui confirme le potentiel de dévelopement de ces organismes en ingénierie écologique. La bioadvection du sédiment et des contaminants par les tubificidae est quantifiée grâce à l'utilisation de luminophores (traceurs particulaires). [...] / The development of efficient bioremediation techniques to reduce pollutant loads in aquatic ecosystems is a challenging research question for ecological engineering. The accuracy of phytoremediation processes has been primarily demonstrated by individual applications on soils or water sediments. The present Ph.D. aims to demonstrate the interest of additional bioturbation combined to phytoremediation processes for the improvement bioremediation efficiency of aquatic sediments. This strategy benefits are tested experimentally in controlled laboratory conditions with a serie of microcosms reproducing each a portion of water/sediment interface such as in wetland areas. In our experiments, bioturbation was carried out by a conveyor-belt invertebrate population, the tubificidae oligochaetes Tubifex tubifex, well known as an active ecological engineer. The phytoremediation was conducted by the riparian plant Typha latifolia known for its ability to remove organic and inorganic pollutants from sediments by accumulation into its biomass. The experiments were managed to demonstrate the effects of this biological influence (plant and inveterbrate) on the mass balances and fluxes of one metal and one pesticide as models of pollutants. Cadmium as a heavy, inorganic and conservative metal pollutant was introduced as a pulse input in the overlying water of the contaminated microcosms, with a cadmium concentration of 20 µg.L-1 in at the initial time of the experiment that lasted one month. In a second experiment, atrazine was mixed in the whole sediment column at the initial time in order to reach a concentration of 5 µg.g-1 of fresh sediment as a source of organic micropollutant and herbicide in the microcosms. The pesticide was radiolabeled with 14C. Fluxes from water to sediment, and from sediment to plants were assessed in experimental conditions with several treatments (+/- plants, +/- bioturbation, +/- pollutants) allowing to demonstrate the effects of the biological influence. Our results indicated that the tubificids and the related bioremediation influences are still efficient under cadmium and atrazine contaminations in aquatic systems. Biotransport due to tubificids changed the distribution of cadmium across the sediment column and enhanced the pumping of cadmium from the water to surface sediment and then to the anoxic underlying sediment surrounding the plant roots. [...]

Thesis (MSc)--University of Stellenbosch, 2002. / ENGLISH ABSTRACT: The passive recovery of old fields in the Karoo is a slow process, hampered by low and erratic rainfall, poor seed germination due to limited availability of suitable micro sites for seedling establishment, competition from existing vegetation, altered soil properties and the reduction of key soil biotic processes. The objectives of the study were to investigate the role of seed banks in the recovery of old fields, and to identify possible plant species and methods of establishing these species with the primary aim of initiating the process of succession / recovery of old fields in the Little Karoo. The investigation of the seed bank addressed the following issues: the resemblance of the seed bank to the above-ground vegetation in an old field and the effect of disturbance on the seed bank. Furthermore, the role of propaguie migration was investigated to establish possible propaguie movement from undisturbed to disturbed areas was investigated. The study indicated that the perennial seed bank had a 31 % similarity to the above ground vegetation in the old field. The seed bank was dominated by annual species. In the above-ground vegetation perennial canopy cover was higher compared to annual cover. The perennials with the highest densities in the soil seed bank were disturbance-adapted species with little importance for grazing animals except perhaps in the short-term. Disturbance caused annual densities to increase and perennial densities to decrease. The investigation of propaguie migration compared adult canopy cover and seedling densities. The results show that perennial distribution was patchy and that propaguie migration is low to non-existent. This led to the conclusion that old fields require supplemental seed additions. A total of seven species were assessed for their restoration potential. The species used in the investigation were Tripteris sinuata, Ruschia spinose, Drosanthemum speciosum, Indigofera sessifolia, Pteronia incana, Ehrharfa calycina and Chaetobromus dregeanus. Seed viability was examined using one of two techniques ie. tetrazolium or a standard germination technique. The optimal temperature for germination was determined using the following temperature regimes: 15°C day / 1DoC night, 20°C day /1 DoC night and 30°C day / 15°C night. The temperature range with the best performance was 20°C day / 1DoC night indicating that species should be sown in autumn or early winter. This timing coincides with the onset of rains in this region. The field trial investigated the influence that various mechanical cultivation techniques (ploughing, disking, tilling and clearing) and soil amendments (seed, seed+aquasorb and seed+straw+branches) have on the establishment of the selected species. Seed germination and seedling survival was monitored. The influence of treatments on water infiltration and soil moisture was investigated. Only four of the seven species germinated (Tripteris sinuata, Ehrharta calycina, Chaetobromus dregeanus and Pteronia incana). As far as species performance was concerned, T. sinuata performed best followed by E. calycina and C. dregeanus, while P. incana failed to persist. The cultivation treatments that yielded the best results were tilling, disking and ploughing. Emergence success in cleared and untreated plots was relatively low. As far as seedling emergence was concerned the most appropriate soil amendments were seed+aquasorb, seed and seed+straw+branches. Although soil moisture was higher on-heuweltjies than offheuweltjies there was no significant difference in seedling emergence and survival between these localities. Even though soil moisture was higher in seed+straw+branches treatment than in seed+aquasorb and seed treatments, seedling emergence in this treatment were lower than in the two latter treatments. This clearly indicates that soil moisture is not the only factor that influences the establishment of species. In the trial a mixture of late successional and pioneer species were sown, primarily with the aim of initiating the process of succession! recovery of old fields. Contrary to what was expected the late successional species germinated first. This has led to the conclusion that these late successional species have no innate dormancy, further proved by the inability of species to germinate after the second season. It could thus be that these late successional species have a short live span, and that they germinate when conditions are favourable. It must also be kept in mind that the seed sown were freshly harvested, and it could be that the pioneer species needed an after-ripening period before they germinated. / AFRIKAANSE OPSOMMING: Die passiewe herstel van oulande in die Karoo is 'n tydrowende proses, wat vertraag word deur wisselvallige reënval, swak ontkieming as gevolg van 'n tekort aan geskikte mikro-habitatte vir saailingvestiging, kompetisie van bestaande plantegroei, veranderende grondeienskappe en die afname in sleutel biotiese prosesse. Die doel van hierdie studie was, om die rol van saadbank in die herstel van oulande te bepaal, sowel as om moontlike plantspesies te identifiseer en metodes van vestiging van hierdie spesies te bepaal met die primêre doelom die proses van suksessie / herstel van oulande in die Klein Karoo te inisieër. Met die saadbankstudie is die volgende punte aangespreek: die ooreenkoms tussen die meerjarige spesies in die saadbank en bogrondse plantegroei op ou lande, en die effek van versteuring op die saadbank. Verder is gekyk na die rol van voortplantingsmeganisme verspreiding om moontlike beweging vanaf onversteurde na versteurde areas te ondersoek. Die studie het aangedui dat daar 'n 31% ooreenkoms is tussen meerjarige spesies in die saadbank en die bogrondse plantegroei op ou lande areas. In die bogrondse plantegroei van die ou land was die kroonbedekking van meerjarige spesies hoër as die van eenjarige spesies. Die dominante meerjarige spesies in die saadbank was spesies wat aangepas is by versteurings, met min weidingswaarde, behalwe moontlik oor die kort termyn. Versteuring het In verhoging in eenjarige en In afname in meerjarige saailingdigthede veroorsaak. Resultate dui daarop dat meerjarige verspreiding onreëlmatig is in die versteurde area en dat die teenwoordigheid van voortplantingsmeganismes, baie laag is. Dit lei tot die gevolgtrekking dat oulande addisionele saad benodig vir hervestiging. 'n Totaal van sewe spesies is ge-evalueer vir hulle moontlike restorasie potensiaal. Die spesies wat in die ondersoek gebruik was, is Tripteris sinuata, Ruschia spinose, Orosanthemum speciosum, Indigofera sessitolie. Pteronia incana, Ehrharta calycina en Chaetobromus dregeanus. Die kiemkragtigheid van die spesies is bepaal deur gebruik te maak van een van twee tegnieke nl. die tetrazolium of 'n standaard ontkiemings tegniek. Die optimale temperature vir ontkieming is bepaal deur gebruik te maak van die volgende temperatuurreekse: 15°e dag / 1Qoe nag, 200e dag /10oe nag and 300e dag / 15°e nag. Die temperatuur reeks waarop spesies die beste presteer het, was 2DOC dag /1DOC nag. Dit dui daarop dat spesies tydens herfs en vroeë winter gesaai moet word. Dit is dan ook die tydperk vir die aanvangs van die reënseisoen in hierdie streek. In die veldproef is gekyk na die invloed van verskeie meganiese bewerkings - tegnieke (ploeg, dis, ghrop en plant verwydering) en grondverbeterings behandelings (saad, saad+aquasorb en saad+strooi+takke), op die vestiging van geselekteerde spesies. Saadontkieming en saailingoorlewing is gemonitor. Die invloed van die behandelings op waterinfiltrasie en grondvog is ook ondersoek. Slegs vier van die sewe spesies het ontkiem naamlik: Tripteris sinuata, Ehrharfa calycina, Chaetobromus dregeanus en Pteronia incana. Spesies wat die beste presteer het, was T. sinuata die gevolg deur E. calycina en C. dregeanus, terwyl P. incana nie oorleef het nie. Die bewerkingsbehandelings wat die beste vestiging van plante gegee het, was die ghrop en disbewerkings gevolg deur ploegbewerking. Ontkiemings sukses in areas waar plante verwyder is en onbehandelde persele was relatief laag. Die grondverbeterings behandeling wat die beste ontkieming gelewer het was saad+aquasorb gevolg deur saad en saad+strooi+takke. Alhoewel grondvog hoër was op heuweltjies as weg van heuweltjies, was daar geen betekenisvolle verskil in ontkieming en oorlewing tussen hierdie lokaliteite nie. Alhoewel grondvog hoër was in saad+strooi+takke behandelings as in saad+aquasorb en saad behandelings was ontkieming laer in hierdie behandeling as in die saad+aquasorb en saad behandelings. Dit dui dus daarop dat grondvog nie die enigste faktor is wat die vestiging van spesies beinvloed nie. In die veldproef is 'n mengsel van pionier en klimaks spesies gesaai, met die primêre doelom die proses van suksessie/herstel van oulande te inisieër. In teenstelling met wat verwag is het die meer klimaks spesies eerste ontkiem. Dit het gelei tot die gevolgtrekking dat hierdie spesies geen dormansie het nie, en dit is verder bewys deur 'n onvermoë om te ontkiem in die tweede seisoen. Dit mag wees dat die meer klimaks spesies 'n kort lewensduur het, en dat hulle ontkiem wanneer toestande gunstig is. Dit moet ingedagte gehou word dat die saad vars geoes was, en dit kon dus wees dat die pionier spesies 'n na-rypwordings periode benodig voordat hulle ontkiem.

Copper cast alloys de-activate antibiotic-resistant bacteria on contact and could be very effective in decreasing potentially harmful microorganisms in the environment. In this study copper alloys with varying copper contents were utilized to evaluate their antimicrobial effects on Pseudomonas aeruginosa, Escherichia coli, and Enterococcus faecium in changing environmental conditions. The survival rates of P. aeruginosa wild type and its derivative transposon mutants of the cin operon on copper cast alloys were investigated in order to demonstrate the influence of genes involved in copper resistance. The gene disruption of the response regulator of the cin operon resulted in shorter survival rates on copper alloys, which was also influenced by temperature and method of exposure. Bacteria often have acquired copper resistance mechanisms in order to withstand higher copper concentrations in their surroundings, which may be a factor in their survival rates on copper surfaces. Copper- and antibiotic-resistant E. coli and E. faecium strains were obtained from pigs raised on feeds containing copper sulfate and antibiotics. Survival rates of these bacteria were influenced by the percentage of copper in the alloys, varying moisture conditions on copper surfaces, suspension media used, and differences between strains. Survival was also dependent on copper corrosion rates since corrosion inhibition with benzotriazole or a thick surface layer of thermal oxide resulted in prolonged survival on copper surfaces. Corrosion of copper surfaces releases copper ions which directly affect bacterial survival on copper alloys. The results obtained in this study emphasize that copper alloys are effective as antimicrobial materials but changing environmental conditions can significantly influence bacterial survival on copper surfaces. These findings can be applied to a better utilization of copper alloys in water, food, and healthcare environments. Antibiotic- and copper ion-resistant bacteria can be killed on contact with copper alloys which makes the proliferation of these microorganisms less likely and reduces the risk to human health. However, in a very different environment copper ion-resistant microbes can be useful for plant-microbe associations in bioremediation of copper mining wastelands.

Factory legacy pollutants are an increasing concern for waterways as old infrastructure deteriorates and contaminates nearby environments. The Fisherville Mill in Grafton, Massachusetts, USA exemplifies this problem since it has now fallen into disrepair and is leaking Bunker C crude oil into the adjoining Blackstone River, a third order stream. Our research examines how effectively an ecologically engineered system (EES), consisting of anaerobic bacteria environments, fungal microcosms, and aquatic plant environments, can break down petroleum hydrocarbons, specifically aliphatic and polycyclic aromatic hydrocarbons (PAH), in this river environment. Our testing protocol involved taking water samples before and after each filtration stage monthly from June through October 2012. Water samples were analyzed at the Brown University Superfund Research Lab using mass spectrometry to determine aliphatic and PAH concentrations. Post-treatment aliphatic oil concentrations were significantly different from baseline concentrations (p=0.005), with an average reduction of 95.2%. Post-treatment PAH concentrations were also significantly different from baseline concentrations (p=0.001), with an average reduction of 91%. We conclude that this EES provided effective treatment for Bunker C crude oil, even though some filtration stages did not achieve their intended objectives. This type of filtration arrangement might be scaled up for use in larger remediation efforts regarding Bunker C crude oil.

- 4 - Abstract The aim of this study was to carry out phytoextraction experiments using corn plants (Zea mays) and determine the phytoextraction efficiency for specific non-steroidal anti- inflammatory drugs and carbamazepine and their combinations. After 10 days of growth, a nutrient solution containing ibuprofene, naproxene, diclofenac and carbamazepine in concentrations ranging from 5 to 10 mg/L was added to hydrophonically cultivated plants. Nutrient solution samples were taken every 24 hours and the samples were then analysed using a HPLC/DAD system. At the end of the experiment, the experimental plants and roots were analysed for extractable residua using HPLC/DAD + FLD. The greatest phytoextraction efficiency was found for ibuprofene. The second and third most effective extraction was observed for naproxene and diclofenac, depending on the evaluation criteria. The lowest phytoextraction efficiency was observed for carbamazepine. With multi-component experiments, lower phytoextraction efficiency was found out for all substances with the exception of ibuprofene in combination with diclofenac and carbamazepine. The toxic impact of ibuprofene on plant transport mechanisms was also proven. The extractable residua analysis confirmed the ibuprofene's toxicity on plant transport mechanisms and also the...

Les plantes hyperaccumulatrices de métaux ont développé des mécanismes spécifiques de prélèvement de la fraction disponible des métaux du sol, conduisant à leur accumulation dans les parties aériennes. L’utilisation agronomique de ces plantes pourrait être une voie de dépollution des sols contaminés en métaux. Ce travail a pour objectif de contribuer à la compréhension des mécanismes chimiques et biologiques qui conditionnent l’accumulation du Ni par les plantes hyperaccumulatrices, en réponse à la disponibilité du métal dans le sol. Après observation du fonctionnement naturel du système sol ultramafique-plante hyperaccumulatrice, nous avons étudié, en laboratoire, l’altération de trois phases minérales nickélifères modèles communes des sols ultramafiques (chrysotile, smectite, goethite) soumises à l’influence de trois Brassicacées hyperaccumulatrices de Ni natives de sites de serpentine d’Europe (Leptoplax emarginata, Alyssum murale et Thlaspi caerulescens). Les résultats montrent que dans les sols ultramafiques, le Ni phytodisponible provient majoritairement de l’altération des minéraux nickélifères silicatés ferromagnésiens, hérités de la roche mère. Les hyperaccumulateurs ont un comportement différent en fonction de la disponibilité du Ni des sols. Dans les milieux à forte disponibilité du Ni, les hyperaccumulateurs accumulent le Ni proportionnellement à la disponibilité du Ni du milieu. Elles réduisent ainsi significativement la fraction de Ni initialement disponible du milieu, et ne semblent pas favoriser la dissolution des minéraux porteurs de Ni. A l’inverse, dans les milieux à faible disponibilité du Ni, la présence des hyperaccumulateurs accélère la dissolution de phases minérales nickélifères silicatées, en favorisant la solubilisation du métal. Dans ce cas la plante prélève la quasi-totalité du Ni solubilisé. Ces résultats sont essentiels à l’élaboration d’un modèle de culture qui permettra de faciliter l’application du procédé de phytoextraction du Ni à grande échelle / Metal hyperaccumulator plants developed specific mechanisms to extract available metals from the soil and consequently accumulate them in aerial parts. The agronomic use of these plants for the decontamination of metal polluted soils is under study worlwide. This work was undertaken to better elucidate the chemical and physiological mechanisms that influence Ni accumulation by hyperaccumulators in response of Ni availability in soils. To answer these questions we undertook two approaches. Firstly, a site study to determine the natural functioning of the ultramafic soil-Ni hyperaccumulators system. Secondly, a lab-scale set of experiments that were designed to study the weathering of three ultramafic Ni-minerals (chrysotile, smectite, goethite) in the rhizosphere of three Ni-hyperaccumulating species naturally growing on European serpentine soils (Leptoplax emarginata, Alyssum murale et Thlaspi caerulescens). Results showed that, in ultramafic soils, phytoavailable Ni derives from the weathering of primary nickeliferous ferromagnesian silicates. Hyperaccumulators show a different behaviour depending of Ni availability in the environment of the culture. In environments showing high available Ni, hyperaccumulators accumulate Ni proportionally to Ni availability. In this way, they can significantly reduce the initially available fraction of Ni but do not seem to enhance the weathering of unavailable Ni forms. Contrarily, in environments with extremely low Ni availability, hyperaccumulators may strongly enhance the dissolution of nickeliferous silicate minerals and so favour Ni solubilisation. If so, hyperaccumulators absorb the majority of Ni solubilised. These results are of considerable interest for the elaboration of a crop model designed for the optimisation of the phytoextraction concept and high scale application

L'objectif de la thèse était de développer un système de phytoépuration par marais artificiels permettant le traitement simultané de micropolluants organiques (MPO) et d'éléments traces métalliques et métalloïdes (ETMM) en milieu méditerranéen, en vue de traiter les rejets émis par un bassin versant industrialisé, et favoriser la résilience d'une zone humide protégée. Une étude en microcosmes a été conduite sur cinq hélophytes (Alisma lanceolatum, Carex cuprina, Epilobium hirsutum, Iris pseudacorus, et Juncus inflexus) natives du marais des Paluns (Marignane, 13). La croissance et le développement des plantes ont été suivis pendant 113 jours d'exposition à des mélanges de MPO et/ou d'ETMM, à des concentrations maximales dix fois plus élevées que les seuils de rejets réglementaires. Les concentrations en ETMM dans les parties souterraines et aériennes des plantes ainsi que les communautés bactériennes de la rhizosphère ont été analysées à la fin de l'étude. Les résultats ont confirmé l'efficacité épuratoire du système et ont permis de mieux comprendre les interactions entre plantes, substrat, polluants et microorganismes. Les résultats encouragent l'utilisation de C. cuprina pour la phytoaccumulation et la phytostimulation, et d'E. hirsutum pour la bioindication. Afin de faciliter l'intégration du marais artificiel au sein du territoire industrialisé, un outil de bioindication a été développé, en complément d'une approche sociologique. La thèse a abouti à la mise en place de trois éco-filtres expérimentaux, en amont du marais des Paluns, permettant de tester en conditions réelles les outils développés et de constituer un site pilote pour le bassin méditerranéen. / The thesis aimed at developing a constructed wetland for simultaneous phytoremediation of organic micropollutants (OPM) and trace metals and metalloids (MM) in Mediterranean environment, for treating chronical and accidental releases from an industrialized catchment, and enhancing the resilience of a protected wetland. A greenhouse study was conducted in microcosms with pozzolan substrate, with five native helophytes (Alisma lanceolatum, Carex cuprina, Epilobium hirsutum, Iris pseudacorus, and Juncus inflexus) from the "Les Paluns" wetland (Marignane, 13). Plant growth and development parameters were monitored during 113 days of exposure to mixtures of OPM and/or MM, with the maximum concentrations ten times over the limits of European quality standards. MM concentrations in belowground and aboveground plant parts and rhizosphere bacterial communities were analyzed at the end of the study. Results confirmed the system depurative efficiency and provided an insight into the interactions between plants, substrate, pollutants and microorganisms, and an assessment of their effects on phytoremediation processes. Results encourage the use of C. cuprina for MM phytoaccumulation and for phytostimulation, and of E. hirsutum as a bioindicator in constructed wetlands. Finally, a bioindication tool was created to assist the constructed wetland integration in the industrialized territory, as a complement of a sociological approach. The thesis led to the implementation of three experimental eco-filters upstream from the Les Paluns wetland, in order to test in naturae the tools developed and to have a pilote site for the Mediterranean basin.

L'ingénierie écologique a permis l'émergence de nouvelles technologies telles que la phytoremédiation, une approche de dépollution des sols basée sur l'utilisation des plantes. Cependant, jusqu'à présent, les mécanismes physiologiques et moléculaires qui contrôlent la dégradation des polluants organiques, en particulier les HAPs, restent très mal documentés chez les plantes supérieures. Dans ce travail, une approche intégrative et un profilage trancriptomique à l'échelle du génome entier ont permis d'étudier les premiers événements moléculaires impliqués dans la réponse, chez les plantes, à un stress provoqué par le phénanthrène. Un réseau de gènes susceptibles d'intervenir dans la perception, la dégradation et/ou la transformation des HAPs en molécules moins dangereuses a ainsi été identifié. D'autre part, nous avons pu montrer que le saccharose induit une tolérance à ce polluant, qui se traduit (i) par une activité transcriptionnelle très rapide, ce qui suggère un effet signalétique, (ii) une reconfiguration importante à l'échelle transcriptionnelle du génome exprimé, qui conduit à une mise en place des voies métaboliques de production d'énergie, de détoxification et de réparation cellulaire. Parallèlement, un site pilote de dépollution a été conçu et mis en œuvre, en exploitant les données obtenues au laboratoire. Cette expérimentation, sur deux ans, nous a permis de comparer l'efficacité de plusieurs espèces végétales mais aussi de tester l'effet protecteur du saccharose in-situ. Malgré l'obtention de résultats contrastés, cette étude confirme l'incidence de la nature des espèces végétales et des pratiques culturales sur l'efficacité de cette méthode de dépollution. Elle souligne également le rôle important de l'interaction plante-microorganismes du sol. / Ecological engineering strategies allowed the emergence of new technologies such as phytoremediation to clean up environmental pollution. Polycyclic Aromatic Hydrocarbons (PAHs) are ubiquitous and hazardous molecules for natural ecosystems and human health. However, molecular mechanisms involved in PAHs detoxification in plant remain largely unknown. This work allowed to decipher the early plant response of phenanthrene induced stress through an integrative investigation using wide genome transcriptomic and targeted metabolomic approaches. Hence, a gene network was identified to be involved in the early perception and signalization of PAHs and putative degradation and/or transformation to harmless molecules. Additionally, we showed that sucrose mitigate phenanthrene induced stress, while Arabidopsis development was arrested and seedlings were unable to accumulate chlorophyll in the presence of high phenanthrene concentration, sucrose allowed growth and chlorophyll accumulation. These phenotypical changes were associated with (i) very early transcriptional regulation, suggesting a sucrose signaling effect (ii) reconfiguration of wide genome transcriptional changes, as metabolic, detoxification and cell repair pathways were induced. In parallel, based on previous results accumulated in controlled conditions. Field investigation allowed the evaluation of the ability of different plant species to clean up PAHs polluted soil. We also evaluate the impact of sucrose supply on natural phytoremediation efficiency. Despite contrasted results, this study confirms the incidence of the plant species and the cultural practices on the efficiency of this method. It also underlines the role of soil microorganisms and plant interactions.

Ce travail a pour objectif l'adaptation en climat tropical d'une technique de phytoépuration utilisant le bambou pour le traitement des eaux usées, déjà développée en climat tempéré. L'étude porte sur la détermination de valeurs de référence pour plusieurs espèces de bambou tropicales (i) des capacités d'absorption d'eau, (ii) de production de biomasse aérienne, et (iii) d'absorption des nutriments. La démarche expérimentale a consisté, dans un premier temps, à déterminer la réponse morphologique de sept espèces de bambous, suite à l'apport excessif de nutriments, comme cela peut se produire lors de l'apport d'eaux usées. Dans un deuxième temps, les capacités d'évapotranspiration de cinq espèces de bambous ont été étudiées en cuves lysimètriques. Enfin, la production de biomasse, ainsi que les prélèvements en azote, phosphore et carbone d'un peuplement multispécifique ont été étudiés en réponse à l'apport de lisier, en conditions réelles d'une station pilote. Ces études ont montré que des apports excessifs en nutriments améliorent la croissance du bambou sans causer de stress détectable. Ils améliorent également la capacité photosynthétique des bambous, ainsi que la production de biomasse, qui est augmentée d'un facteur 2 à 6 selon les espèces, par rapport au traitement témoin. La production de biomasse importante, de l'ordre de 20,7 à 80 tonnes de matière sèche produite par hectare et par an, confère aux espèces étudiées des capacités d'extraction élevées, avec des exportations de 400 à 1600 kg.ha-1 en azote, 30 à 130 kg.ha-1 de phosphore et 18 à 67 t.ha-1 de carbone piégé dans la biomasse en deux ans. Les taux d'évapotranspiration des bambous sont plus élevés que ceux de cultures classiques, avec des valeurs moyennes annuelles comprises entre 4 et 7mm/j et des coefficients culturaux moyens de 2,1 à 3,8 selon les espèces. Cette étude a permis d'identifier plusieurs espèces de bambous intéressantes pour le traitement des eaux usées en climat tropical, notamment les espèces Bambusa oldhamii, Bambusa vulgaris et Gigantochloa wrayii. Dans une optique de phytoépuration ces résultats sont d'autant plus encourageants qu'ils ont été obtenus avec des plants de bambou n'ayant pas encore atteints leur pleine maturité. / The aim of this work was to adapt under tropical climate, a wastewater treatment phytotechnology which uses bamboo species, already developed under temperate climate. The objectives of the study were to establish reference values on the water and nutrient uptakes, and on above-ground biomass yields, for different tropical bamboo species. The experimental approach relied first in the quantification of the morphological response of seven bamboo species under high nutrient loads, up to 13.2 t.ha-1.yr-1 of NPK, as it occurs in wastewater treatment system. Second time, the evapotranspiration rates and crop coefficients of five bamboo species were determined using a lysimeter experiment. Finally, the biomass yield and the nitrogen, phosphorus and carbon uptakes were studied for a multi-specific bamboo plantation in response to pig slurry application, at field scale. The results have shown that the high nutrient load (13.2 t.ha-1.yr-1 of NPK) did not cause any detectable stress on the bamboo growth. On the contrary, the photosynthetic activity was improved and the growth rate was increased by 2 to 6 times compared with the control treatment. Depending on bamboo species, the annual biomass yield ranges from 20,7 to 80 t.ha-1.yr-1, and the nutrients storage into the biomass was 400 to 1600 kg.ha-1 for nitrogen, 30 to 130 kg.ha-1 for phosphorus and 18 to 67 t.ha-1 for carbon, in two years of experiment. The yearly average evapotranspiration rates were higher than for typical crops and range from 4 to 7mm.day-1, with average crop coefficients between 2.1 to 3.8, depending on species. Due to their high biomass yield, high nutrient uptakes and high evapotranspiration rates, some bamboo species, i.e. Bambusa oldhamii, Bambusa vulgaris and Gigantochloa wrayii appear as good candidates for wastewater treatment under tropical climate. These results are even more promising since they were obtained for non mature bamboo plants.

Abstract, key words The aim of this thesis was to perform a phytoextraction experiment with benzodiazepines chlordiazepoxide, diazepam, alprazolam and bromazepam on corn plant (Zea mays). After 14 days of growing of sterile cultivation, new medium (Murashige and Skoog) contaminated with benzodiazepine was added. The starting concentration of benzodiazepine was 10 mg · l-1. After every 24 hours, a sample of medium was collected. The actual concentration of benzodiazepine was measured on HPLC with UV detection. Extractable residues were also analysed to find out whether the benzodiazepine is being translocated to the upper parts of the plant. The same HPLC conditions were used for these samples. The greatest phytoextraction efficiency (the amount of drug extracted by 1 gram of biomass in 24 hours) was observed for chlordiazepoxide, followed by bromazepam, alprazolam and diazepam respectively. The extractable residues analysis confirmed the translocation to the upper parts of the plant for every of the benzodiazepines tested. That indicates a threat for the animals through the food chain contamination. Key words: phytoremediation, phytoextraction, benzodiazepines, extractable residuals, HPLC.