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Estudo da atividade carcinogênica dos hidrocarbonetos policíclicos aromáticos através de descritores quânticos / Study of structure-activity in polycyclic aromatic hidrocarbonsTroche, Karla Souza 29 July 2003 (has links)
Orientador: Douglas Soares Galvão / Dissertação (mestrado) - Universidade Estadual de Campinas, Instituto de Fisica Gleb Wataghin / Made available in DSpace on 2018-09-27T13:47:49Z (GMT). No. of bitstreams: 1
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Previous issue date: 2003 / Resumo: Neste trabalho apresentamos estudos de estrutura-atividade realizados para 81 hidrocarbonetos policíclicos aromáticos (PAHs) tentando identificar compostos carcinogênicos. Em particular, empregamos uma nova metodologia desenvolvida para tratar o problema da correlação estrutura geométrica com atividade biológica, denominada Metodologia de Índices Eletrônicos (MIE). Utilizamos três métodos semi-empíricos para estudar a dependência entre a qualidade dos resultados obtidos pela MIE e o Hamiltoniano utilizado. Para validarmos os descritores utilizados pela MIE, investigamos a relação entre a atividade experimental dos PAHs e descritores teóricos através de cinco metodologias de reconhecimento de padrões: a Análise de Componentes Principais (PCA), Análise Hierárquica de Agrupamentos (HCA), K-ésimo vizinho mais próximo (KNN), Soft Independent Modeling of Class Analogies (SIMCA) e as Redes Neurais Artificiais (NN). Para estas investigações distintas pudemos correlacionar a atividade dos PAHs estudados com parâmetros teóricos, em sua maioria eletrônicos, onde os parâmetros utilizados na MIE foram selecionados pelos diferentes métodos. Este estudo valida estatisticamente a MIE como uma nova metodologia capaz de identificar compostos biologicamente ativos, e com um custo computacional menor que técnicas convencionais de Relação estrutura-atividade (SAR) e apresentando um desempenho, em geral superior / Abstract: In this work we present the study structure-activity realized for 81 polycyclic aromatic hydrocarbons (PAHs) trying to identify carcinogenic compounds. Particularly, we used a new methodology developed to deal with the problem of correlation between geometrical structure and biological activity, the Electronic Indices Methodology (EIM). We used three semi-empirical methods to analyze the dependence between the quality of results obtained through EIM and the Hamiltonian used. In order to validate the descriptors used in EIM, we investigated the relationship between the experimental activity of PAHs and the theorical descriptors through five methodologies of pattern recognition: Principal Component Analysis (PCA), Hierarchical Cluster Analysis (HCA), Kth Nearest Neighbor (KNN), Soft Independent Modeling of Class Analogies (SIMCA) and Neural Networks (NN). From these different investigations, we could correlate the activity of PAHs studied with theorical parameters, almost all electronic, where the used parameters on EIM were selected with the different methods. These studies validate the statistical value of electronic parameters derived from EIM analysis and their ability to identify active compounds. The EIM out performed more standard Structure-Activity Relationship (SAR) methodologies / Mestrado / Física da Matéria Condensada / Mestre em Física
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Avaliação da influência de diferentes óleos extensores com baixo teor de policíclicos aromáticos nas propriedades da borracha à base butadieno e estireno (SBR) / Evaluation of the influence of different extender oils with low content of polycyclic aromatic on the properties of butadiene-styrene based rubber (SBR)Fernanda Cristina da Silva Delgado 24 February 2011 (has links)
O óleo extensor normalmente empregado em copolímeros à base de butadieno e estireno ( borracha SBR) da série 1712 é o extrato aromático (DAE). Nesta Dissertação, esse óleo foi substituído por óleos com baixos teores de policíclicos aromáticos em formulações de SBR. Esta substituição se deu em atendimento a Regulamentação REACH (EC No1907/2006 do Parlamento Europeu e do Conselho de 18 de Dezembro de 2006, Anexo XVII) que determina que a soma de hidrocarbonetos policíclicos aromáticos individuais (PAHs) deve ser abaixo de 10 mg/kg e o teor de benzo(a)pireno (BaP) não deve exceder 1 mg/kg. Os óleos empregados foram o extrato aromático residual tratado (TRAE) e dois óleos naftênicos de fornecedores diferentes (HN1 e HN2). As composições de SBR estendidas em DAE, TRAE, HN1 e HN2 tiveram suas propriedades térmicas avaliadas por análise termogravimétrica (TG) e calorimetria diferencial de varredura (DSC). As propriedades físicas foram determinadas por ensaios de tração, dureza, resistência à abrasão e resiliência. Foram ainda avaliadas as propriedades reométricas e reológicas, por viscosidade e relaxação Mooney, respectivamente. Ao final os resultados demonstraram que é possível a substituição do óleo extensor por quaisquer dos óleos testados sem prejuízos nas propriedades estudadas / The extender oil usually employed in compositions of rubbers based on sytrene and butadiene (SBR) 1712 is the aromatic extract DAE. In this Dissertation, this oil was substituted by oils with low levels of polycyclic aromatic hydrocarbons: the treated residual aromatic extract (TRAE) and two naphthenic oils from different suppliers (HN1 and HN2). This substitution was performed in response to REACH Regulation (EC No1907/2006 European Parliament and the Council of 18 December 2006, Annex XVII) which state that the sum of individual polycyclic aromatic hydrocarbons (PAHs) should be below 10 mg / kg and the levels of benzo (a) pyrene (BaP) should not exceed 1 mg / kg. SBR compositions extended with DAE, TRAE, HN1 and HN2 were characterized in terms of thermal properties by thermogravimetry (TG) and differential scanning calorimetry (DSC), rheometric properties, physical properties (tension tests, hardness, abrasion resistance and resilience) and rheological (viscosity and Mooney relaxation). The final results showed that it is possible to replace the extender oil DAE for any of the tested oils without loss in the studied properties
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Estudo de hidrocarbonetos e metais em sedimentos de fundo do Rio Negro na orla urbana de ManausLopes, Alcinei Pereira 23 September 2010 (has links)
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Previous issue date: 2010-09-23 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / The waters of the Rio Negro, in the border city of Manaus, receives large amounts of domestic and industrial waste from its main tributaries (Tarumã-Acu, Sao Raimundo, Pupils and Puraquequara) that may be compromising their natural
features (water, plants, sediments and etc.). Due the ability to accumulate organic and inorganic compounds, the bottom sediments are used to assess the contamination levels of aquatic environments. As a result, we determined the concentrations of aliphatic hydrocarbons, polycyclic aromatic hydrocarbons (PAH) and potentially toxic metals (MPT) in ten samples of bottom sediments collected in March 2009 in
the confluence between the Rio Negro and major watersheds the city of Manaus. The aim of study was to classify the origin and level of contamination of these compounds. In the determination of hydrocarbons, sediments were freeze dried,
extracted with hexane, fractionated by open column liquid chromatography. The determination of aliphatic hydrocarbons was performed by GC-FID and the PAH by GC-MS. After digestion with aqua regia the MPT (Al, Fe, Zn, Cu, Ni, Cr, Pb, Cd and Mn) in total fraction of sediments were determined by ICP-OES. The results showed that concentrations of total aliphatic hydrocarbons were 13.4 to 448 mg g-1, and the
sum of 38 PAHs was 58.8 to 6832 ng g-1. These values are considered high for natural aquatic environments that have not suffered oil spill accidents. Among the metals determined Al (32 091 mg kg-1) and Fe (35 474 mg kg-1) were those with the
highest concentrations.The sediments that received the largest anthropogenic contribution were those collected at the entrance of the basin of the streams São Raimundo and Educandos. The diagnosis index hydrocarbons the origin of in sediments showed a predominance of mixed sources and petrogenic sources in most seasons / As águas do rio Negro na orla urbana de Manaus recebem grande quantidade de resíduos domésticos e industriais de seus principais afluentes (Tarumã-Açu, São Raimundo, Educandos e Puraquequara) que podem estar comprometendo suas
características naturais (água, plantas, sedimentos e etc). Por ter a capacidade de acumular compostos orgânicos e inorgânicos, os sedimentos de fundo são utilizados na avaliação dos níveis de contaminação de ambientes aquáticos. Em virtude disso, foram determinados as concentrações de hidrocarbonetos alifáticos, hidrocarbonetos policíclicos aromáticos (HPA) e metais em dez amostras de sedimentos de fundo, coletadas em março de 2009 nas confluências entre o rio Negro e as principais bacias de drenagem da cidade de Manaus. O estudo tem o objetivo de classificar a origem e o nível de contaminação destes compostos. Nas determinações de hidrocarbonetos,
os sedimentos foram liofilizados, extraídos em soxhlet, fracionados por cromatografia líquida de coluna aberta. A determinação de hidrocarbonetos alifáticos foi realizada por CG-DIC e os HPA por CG-EM. Apos digestão com água régia, os
metais (Al, Fe, Zn, Cu, Ni, Cr, Pb, V, Cd e Mn) presentes na fração total dos sedimentos foram determinados por ICP-OES. Os resultados mostraram que as concentrações dos hidrocarbonetos alifáticos totais foram de 13,4 a 448 μg g-1, e a
somatória dos 38 HPA foi de 58,8 a 6832 ng g-1. Esses valores são considerados elevados para ambientes aquáticos naturais que não sofreram acidentes de derrame de óleo. Entre os metais determinados o Al (32091 mg kg-1) e o Fe (35474 mg kg-1) foram os que apresentaram as maiores concentrações. Os sedimentos que receberam a maior contribuição antrópica foram daqueles coletados na entrada da bacia dos igarapés São Raimundo e Educando. Os índices de diagnósticos da origem de
ix hidrocarbonetos nos sedimentos mostraram predominância de fontes petrogênica e fontes mistas na maioria das estações.
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A study of particulate matter pollutants in the Canberra air shed, including total suspended particles PM10, lead and polycyclic aromatic hydrocarbonsFox, Ian, n/a January 1998 (has links)
Methods for the determination of Polycyclic Aromatic Hydrocarbons (PAHs)
associated with suspended participate matter were developed with the aim of
determining airborne concentrations and to investigate seasonal trends. Other
associate pollutants such as Total Suspended Particulate matter (TSP), Particulate
Matter with an equivalent aerodynamic diameter less than 10 micrometres (PM10)
and lead concentration were also reviewed to determine trends. Motor vehicle
emissions appear to be the source of the PAHs and differences between the types
and concentrations of PAHs detected at central business district sites verses
suburban sites were noted. Wind erosion, biomass burning, motor vehicle emissions
and industrial processes are sources of particulate matter in the atmosphere. Lead
comes mainly from motor vehicles emissions in the ACT with some lead possibly
from the burning of lead contaminated fuel. TSP and lead concentrations have
decreased since air quality monitoring began in the early 1980s. PM10 concentration
may also have fallen but the data set for PM10s is to small to draw any firm
conclusions. Only TSP lead concentrations displayed a seasonal pattern. The ACT
air pollution Act 1984 has placed restriction on the burning of fuels to improve air
quality in the ACT. The air quality in regards to TSP and lead is improving.
However, the only strong links between the Act and decreased pollutant
concentrations is the introduction of unleaded petrol and the decrease of airborne
lead concentrations.
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Study of Genes Relating To Degradation of Aromatic Compounds and Carbon Metabolism in Mycobacterium Sp. Strain KMSZhang, Chun 01 May 2013 (has links)
Polycyclic aromatic hydrocarbons, produced by anthropological and natural activities, are hazardous through formation of oxidative radicals and DNA adducts. Growth of Mycobacterium sp. strain KMS, isolated from a contaminated soil, on the model hydrocarbon pyrene induced specific proteins. My work extends the study of isolate KMS to the gene level to understand the pathways and regulation of pyrene utilization. Genes encoding pyrene-induced proteins were clustered on a 72 kb section on the KMS chromosome but some also were duplicated on plasmids. Skewed GC content and presence of integrase and transposase genes suggested horizontal transfer of pyrene-degrading gene islands that also were found with high conservation in five other pyrene-degrading Mycobacterium isolates. Transcript analysis found both plasmid and chromosomal genes were induced by pyrene. These processes may enhance the survival of KMS in hydrocarbon-contaminated soils when other carbon sources are limited. KMS also grew on benzoate, confirming the functionality of an operon containing genes distinct from those in other benzoate-degrading bacteria. Growth on benzoate but not on pyrene induced a gene, benA, encoding a benzoate dioxygenase α-subunit, but not the pyrene-induced nidA encoding a pyrene dioxygenase α-subunit; the differential induction correlated with differences in promoter sequences. Diauxic growth occurred when pyrene cultures were amended with benzoate or acetate, succinate, or fructose, and paralleled delayed expression of nidA. Single phase growth and normal expression of benA was observed for benzoate single and mixed cultures. The nidA promoters had potential cAMP-CRP binding sites, suggesting that cAMP could be involved in carbon repression of pyrene metabolism. Growth on benzoate and pyrene requires gluconeogenesis. Intermediary metabolism in isolate KMS involves expression from genes encoding a novel malate:quinone oxidoreductase and glyoxylate shunt enzymes. Generation of C3 structures involves transcription of genes encoding malic enzyme, phosphoenolpyruvate carboxykinase, and phosphoenolpyruvate synthase. Carbon source modified the transcription patterns for these genes. My findings are the first to show duplication of pyrene-degrading genes on the chromosome and plasmids in Mycobacterium isolates and expression from a unique benzoate-degrading operon. I clarified the routes for intermediary metabolism leading to gluconeogenesis and established a potential role for cAMP-mediated catabolite repression of pyrene utilization.
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Biomarkers of Exposure to Foodborne and Environmental Carcinogens: Enterosorbent Intervention in a High Risk PopulationJohnson, Natalie Malek 2010 August 1900 (has links)
The need to assess human exposures to foodborne and environmental carcinogens, particularly in populations at high risk for cancer and disease, has led to the development of chemical-specific biomarkers. Sensitive biomarkers for aflatoxin and polycyclic aromatic hydrocarbons (PAHs) have been useful in providing information on population exposure and reducing associated public health impacts. Aflatoxins are fungal metabolites found in a variety of foods. Among these toxins, aflatoxin B1 (AFB1) is the most predominant and hepatocarcinogenic. Acutely, AFB1 can cause disease and death, necessitating safe and effective intervention strategies. Inclusion of NovaSil (NS) clay in the diet represents a practical, sustainable approach. NS has been shown to prevent aflatoxicosis in multiple animal species by binding aflatoxins in the gastrointestinal tract, reducing toxin bioavailability. Co-exposure to PAHs, hazardous environmental contaminants, has been shown to increase the risk for hepatocellular carcinoma (HCC). Therefore, objectives of this research were to utilize biomarkers to assess aflatoxin and PAH exposures in susceptible populations in Ghana and the U.S. and to evaluate the safety and efficacy of NS intervention in Ghana (a population at risk for aflatoxicosis).
After 3-month intervention with 3.0g NS/day, median aflatoxin M1 (an AFB1 metabolite) was significantly reduced (up to 58 percent) compared to the placebo group. Furthermore, no significant differences were found in levels of nutrient minerals between NS and placebo groups at baseline and 3-months suggesting NS can be used to effectively sorb AFB1 without affecting serum concentrations of important minerals. PAH biomarker results showed participants in Ghana were significantly exposed to high levels of PAHs based on the presence of 1-hydroxypyrene (1-OHP) in the majority of urines (98.9 percent). NS treatment had no effect on 1-OHP levels, further confirming the preferential binding of aflatoxins by NS. U.S. population data from a Hispanic community in Texas with an elevated incidence of HCC demonstrated a lower percentage and level of aflatoxin and PAH biomarkers. Aflatoxin M1 excretion, however, was associated with increased consumption of certain foods prone to aflatoxin contamination; thus, some individuals may be more vulnerable to exposure and associated interactions that increase the risk for HCC (e.g., PAHs or hepatitis infection).
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Distribution and characteristics of black carbon in sediments of Kao-ping Coastal AreasWu, Wen-Jing 28 August 2006 (has links)
The objective of this study was to investigate the spatial and temporal
distribution of black carbon (BC) and possible sources by analyzing BC contents
in core and sediment trap samples collected from Kao-ping submarine Canyon and
surficial sediments collected from Love River, Chianjen River, Kaohsiung Harbor,
Kao-ping River and adjacent coastal area. In addition, sediment core and trap
samples of Kao-ping submarine Canyon, and suspended solids of Kao-ping
estuary were analyzed to estimate the BC loading from Kao-ping River and the
flux in Kao-ping submarine Canyon.
The concentrations of BC ranged from 0.38 to 3.29 mg g-1 in this study. The
results we found in coastal sediments were comparable to those in Asia, but lower
than those in America and Europe. Black carbon found in surficial sediments of
D2, L1 and of stations from Love River, Chianjen River and Kaohsiung Harbor
were contributed from vehicle emission or coal combustion. Correlation
coefficients of BC versus total polycyclic aromatic hydrocarbon (PAH)
concentrations, combustion PAHs, total organic carbon (TOC) and grain size were
significant in the sediments of Kao-ping River adjacent coast.
Regrading to the temporal distribution of BC in Kao-ping submarine Canyon,
BC and PAHs increased in the deposited sediment after 1970, that was probably
related to prosperous industrial activities for last decades in Taiwan.
Surficial sediments could be grouped into three clusters by hierarchical cluster
analysis (HCA). Results of principal component analysis (PCA) showed principal
component 1 (PC 1) could explain 35 % of total variances. Significant PC 1
compound loadings were found mostly from high molecular weight PAHs which
derived mainly from combustion processes. This result was supported by the
significant correlation (p<0.05) of PC 1 scores versus BC concentrations which
were also mainly derived from combustion.
BC fluxes for sediment cores, S1 and S37, and sediment trap of Kao-ping
submarine Canyon, 0.59 g m-2 yr-1, 2.03 g m-2 yr-1 and 23 g m-2 yr-1, respectively,
were comparable to those reported for surficial sediments in literature. However,
BC fluxes in this study were lower than those in the sediments from Mouth of
Providence River, Palos Verdes Shelf and New England Harbors, but higher than
those in pelagic sediments of the Pacific Ocean. In addition, we also measured BC
concentrations in suspended solid samples to estimate loadings of Kao-ping
estuary which ranged from 33 to 1765 kg day-1 with an average of 602 kg day-1.
Annual BC loading of Kao-ping River was roughly estimated as 29.55¡Ñ104 tons
which was lower than that of the Mississippi River.
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Investigation Of Extraction Methodologies For Quantitative Determination Of Polycyclic Aromatic Hydrocarbons In SedimentsTopal, Tansel 01 January 2011 (has links) (PDF)
The extraction procedures for the determination of polycyclic aromatic hydrocarbons (PAH) concentrations in sediment samples had been developed by using GC-FID and GC-MS. The optimized methods were soxhlet extraction, ultrasonic bath extraction and solid phase micro extraction (SPME). In order to search out the main factors affecting extraction efficiencies of the methods, factorial design was used. The best extraction method was chosen and optimum values for main factors were selected for the development of the extraction method for PAH determination in sediment samples. The accuracy of the method was verified by analyzing NIST SRM 1597 (complex mixture of polycyclic aromatic hydrocarbons from coal tar). The selectivitiy and sensitivity obtained were quite adequate for the determination of PAHs in sediment sample. The best extraction and analysis methods were then applied to determine 16 PAHs in sea sediments from Ö / lü / deniz Lagoon, Mugla, Turkey and 19 PAHs in Ikizcetepeler Dam Lake, Balikesir, Turkey sediments to illustrate the capability of the selected extraction and analysis method to detect PAHs and to determine the status of the contamination.
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Ecological risk analysis of polycyclic aromatic hydrocarbons, black carbon and heavy metals on soils and plants from coal factories inJiyuan City, ChinaLeung, Kwun-lun., 梁冠倫. January 2010 (has links)
published_or_final_version / Earth Sciences / Master / Master of Philosophy
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Comparison between lichen, conifer needles, resin-based passive air sampling devices (PASDs), and snow to monitor semi-volatile organic compounds (SOCs) in the atmosphere /Schrlau, Jill E. January 1900 (has links)
Thesis (M.S.)--Oregon State University, 2008. / Printout. Includes bibliographical references. Also available on the World Wide Web.
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