Thesis (M.S.)--University of West Florida, 2008. / Title from title page of source document. Document formatted into pages; contains 111 pages. Includes bibliographical references.

In 1988, the red snapper fishery in the Gulf of Mexico was declared severely overfished. Since then, the daily bag limit has been reduced from 7 to 2, the minimum size limit has increased from 13 to 16 inches, and the year-round recreational season has been reduced to one lasting 53 days. Despite NOAA's recommendations that the Gulf States match these regulations, Texas has enforced a 4 bag limit and no seasonal restrictions. In 2009 alone, the total recreational catch exceeded the allocated quota by 1.7 million pounds. The lack of consistency between state and federal regulations and the drastic changes in management schemes have affected anglers' confidence in management, and limited the ability of the fishery to successfully adapt. This study provides an innovative assessment that measures fishers' knowledge and determines their support for current fishery regulations and for the scientific rationale behind the regulatory system. Over 150 interviews of red snapper anglers at charter and head boat docks were conducted along the Texas coast. The majority of respondents were 20-50 year old (74.5%), male (89.3%), four-year college graduates (34.9%), who resided near the coast (65.3%), and were targeting red snapper (92.5%). Results showed that 72.5 percent of respondents agree with the science behind red snapper management, 63.4 percent believe that the stock has improved since 2008, 89.5 percent agree that a bag limit in general is an appropriate management tool, and 78.2 percent agree with the Texas state management of red snapper. However, 51.7 percent of respondents disagree with the federal management of red snapper, and 90.1 percent of all respondents did not know that red snapper live to be 41-60 years old. The lack of support for the federal management may be due to the lack of knowledge of red snapper life span. Applications of this research will be imperative for managers - who already address biological, ecological, and economic aspects of a fishery - to expand their multi-disciplinary approach to include social analysis for the successful evolution of recreational fisheries management. Future research should explore improved management approaches that involve greater communication between the stakeholders and managers.

As a highly targeted species, red snapper have been overfished since the 1970’s. Inadequate monitoring and reporting of discard rates impedes regulatory measures which are in place to allow red snapper populations to reach a healthy, sustainable level. This study documented the relationship between morphometric measurements and otolith analysis of red snapper caught from a recreational headboat fishing exclusively in the GOM’s EEZ of the upper Texas coast. The collected data of this research show that of the 594 red snapper caught within the sample group, 76% of the fish were discarded; analysis of the lengths of these discarded fish show that 15.5% were of regulation size (16 inches) or larger, clear evidence that high-grading is occurring. The effort for the total amount of red snapper caught by each individual angler within the sample group was measured to determine on average, approximately two red snapper were caught per person, per hour. The size distribution ranged from 16 to 32 inches with a mean total length of 21.32 inches for retained fish while discarded fish ranged from 5.5 to 22.5 inches with a mean of 14.23. Weight distribution ranged from 1.5 to 18.5 pounds with a mean of 5.81 pounds for retained fish and 0.20 to 6 pounds with a mean of 1.57 pounds for discarded fish. Age distribution ranged from 3 to 14 years of age; red snapper can live over 50 years, however relatively none (2.42%) older than 10 years were present in the sample, demonstrating a highly truncated population. Because fecundancy increases with age in females, longevity extends reproduction potential for red snapper. Management of reef fishes, and red snapper in particular, are difficult due to variances in growth rates and habitat use, complex population structure, and increasing reproduction levels with maturity. Recommendations for management include implementing an educational outreach program, reducing effort and discard rates, lowing rates of exploitation, and creating a marine reserve. Future research should address the entire Texas coast population of for-hire vessels (charter and headboats) to obtain data on discard rates and age distribution of red snapper.

Thesis (M.S.)--University of North Carolina at Wilmington, 2005. / Includes bibliographical references (leaves: 29-34)

Seafood substitution is a worldwide problem due to factors such as limited monitoring coupled with complex supply chains. Red snapper (Lutjanus campechanus) is a highly valued and overfished species that is commonly substituted with other fish, such as tilapia, rockfish, and other snapper species. DNA barcoding is typically used by regulatory agencies to detect seafood substitution; however, it is expensive and time-consuming. A rapid, real-time PCR assay targeting red snapper was developed previously for use in fisheries management; however, it has not been tested for its ability to detect red snapper species substitution. The objective of this study was to assess the ability of the real-time PCR assay to identify red snapper fillets and differentiate red snapper from common substitute fish species in combination with DNA barcoding. A total of 21 fresh/frozen fillets labeled as “red snapper” were tested with real-time PCR, along with 57 fresh/frozen fillets representing 15 of the most common categories of fish mislabeled as red snapper. All samples were tested with DNA barcoding to confirm the identity of fish species. Real-time PCR parameters were optimized to reduce background signals associated with cross-reactivity. Overall, real-time PCR identified 4 samples as red snapper: 3 were authenticated as red snapper with DNA barcoding and 1 was identified as mahi-mahi. Overall, 40% of all samples and 91% of “red snapper” samples were considered mislabeled according to DNA barcoding. Red snapper was substituted with other snapper species (e.g., Lutjanus malabaricus, Lutjanus peru, Ocyurus chrysurus, and Rhomboplites aurorubens), rockfish (Sebastes flavidus and Sebastes brevispinis), sea bream (Pagrus major/Pagrus auratus), and mahi-mahi (Coryphaena hippurus). The real-time PCR assay tested in this study can serve as a rapid screening test for the detection of mislabeled species, which can then be confirmed with sequencing techniques. This species identification technique has the potential to be used by regulatory agencies to rapidly determine the authenticity of red snapper on-site.

Estimation of natural mortality within statistical catch-at-age models has been relatively unsuccessful and is uncommon within stock assessments. The models I created estimated population-dynamics parameters, including natural mortality, through Metropolis-Hastings algorithms from Gulf of Mexico red-snapper Lutjanus campechanus data. I investigated the influences of assumptions regarding model configuration of natural mortality and selectivity-at-age parameters by comparing multiple models. The results of this study are preliminary due to parameter estimates being bounded by uniform priors and thus a potential lack of convergence to the posterior distribution. Estimation of a natural-mortality parameter at age 0 or a Lorenzen natural-mortality parameter could be confounded with selectivity-at-age-1 parameters for bycatch from the shrimp fisheries. The Lorenzen natural-mortality curve was calculated by dividing the parameter by red snapper length at age. An age-1 natural-mortality parameter might not be estimable with the currently available data. Values of the natural-mortality parameter for ages 2 and older appear to be slightly less influenced by assumptions regarding selectivity-at-age parameters. We conducted a simulation study to determine the accuracy and precision of natural-mortality estimation assuming the selectivity-at-age-1 parameter for bycatch from the shrimp fisheries equaled 1.0 and a Lorenzen natural-mortality curve. The simulation study indicated that initial abundance-at-age parameters may be inestimable within the current model and may influence other parameter estimates. The preliminary simulation results showed that the Lorenzen natural-mortality parameter was consistently slightly underestimated and apical-fishing-mortality parameters were considerably underestimated. The estimation of natural mortality within a statistical catch-at-age model for Gulf of Mexico red snapper has many caveats and requires additional investigation. / Master of Science