Large scale ecosystem restoration is an important societal issue because significant risks, costs, and benefits can accrue on large landscapes. It is important to understand baseline ecosystem conditions, existing condition, and to the extent possible estimate ecosystem response to alternative management scenarios. Incorporating ecosystem process and function into restoration planning and implementation will make ecosystem restoration projects sustainable. The Upper Mississippi River System is an excellent case study for such issues because it is an important, multiple-use ecosystem with significant ongoing investment in ecosystem, agri-system, and navigation system management. Large-scale geomorphology, hydrology, and land cover information was compared among presettlement, contemporary, and potential future reference conditions to examine ecosystem state and evaluate mechanisms responsible for ecosystem condition. The UMRS was scaled by physiographically similar characteristics into large floodplain reaches several hundred river miles in length, geomorphic reaches 50 to several hundred miles, and a mile-by-mile segmentation of the river floodplain extent. Ecologically relevant geomorphic classes were devised from existing data and evaluated by river reach to characterize presettlement geomorphology, and dams and levees were superimposed to reflect the altered hydrogeomorphology of the contemporary ecosystem. A pre- and post-impact Indicators of Hydrologic Alteration river stage analysis evaluated dam impacts, and pre-dam and post-dam aquatic habitat class distribution was compared. A floodplain inundation simulation analysis provided new information on the potential spatial distribution of frequent floods. Land cover data available for presettlement and modern reference periods were compared at several spatial scales. Multivariate analyses evaluated land cover characteristics among geomorphic reaches, as well as to assess the influence of hydrogeomorphic drivers on land cover for presettlement and contemporary reference periods. The objective of this research was to clearly delineate the divergence of environmental conditions among reference periods to evaluate which drivers need to be, and can be, altered to change ecosystem state. Hydrogeomorphic response to development indicates several restoration objectives that are appropriate system-wide and others that are best suited to specific river reaches. Similar data sources are available for much of the rest of the United States through the Public Land Survey and engineering surveys of any significant civil works projects.

The Upper Mississippi River System (UMRS) is a diverse and dynamic ecosystem that includes the main stem river channel, side channels, backwater floodplains and lakes, islands, wetlands, grasslands, and floodplain forests. The hydrology of this rich ecosystem is one of the key drivers for physical, chemical and biological processes. However, the hydrology and hydraulics of the UMRS has been drastically altered from its natural state as a result of the construction of the locks and dams in the 1930s. Beginning with the Water Resources Development Act of 1986, biologists, ecologists, and engineers have been working to restore the river to a more natural state within the current constraints imposed by the lock and dam system. In an effort to restore rivers to a more natural state, the determination of a hydraulic reference condition is essential to understanding the "why and how" of historical river system function. Understanding the fundamental processes of historical conditions will help prioritize resources and better quantify possible outcomes for riverine restoration. The main goal of this study was to construct a hydrodynamic reference condition for Pool 8 of the Upper Mississippi River System using hydrodynamic computational fluid dynamic (CFD) modeling. The CFD model will provide a better understanding of pre-impoundment flow conditions as compared to post-impoundment conditions today. The numerical model was constructed and developed primarily from a pre-impoundment 1890s topographic map with bathymetric cross-sections in the channels. The 1890s map and other sources from the U.S. Army Corps of Engineers provided historic elevation and hydraulic reference data for model calibration. The calibrated historic model was then compared with a current model of similar scale representing post-impoundment conditions, allowing for quantitative analysis of the differences between the two conditions. Model results indicated large changes in average depth and average velocity between historic and current conditions in certain parts of the pool, while others remained relatively unchanged. For example, velocities decreased in main channel aquatic areas in the lower part of Pool 8 from an average of 0.6 m/s (2.0 ft/s) under historic conditions to 0.1 m/s (0.3 ft/s) under current conditions. In the same part of the pool, however, velocities in contiguous backwater areas remained relatively constant, with most remaining less than 0.25 m/s (0.82 ft/s). Additionally, in the lower part of the pool, discharge distribution between the floodplain areas and the main channel was historically much more dynamic, with flow concentrated in the main and secondary channels at discharges less than 2265 m3/s and in the floodplains at greater than 2265 m3/s. Under current conditions, discharge distribution is much less dynamic, with approximately 2/3 of the total discharge conveyed on the floodplain for all discharges modeled (283 m3/s to 2832 m3/s or 10,000 ft3/s to 100,000 ft3/s).

Aquesta tesi tracta la jerarquia i l'heterogeneïtat dels sistemes fluvials que afecten l'estructura de les comunitats bentòniques de diatomees. A nivell regional, es van buscar diferents grups de punts i les seves espècies indicadores, es va estudiar la resposta de les comunitats de diatomees als gradients ambientals, es va avaluar la utilitat de diferents índexs de diatomees i es va buscar el millor sistema de classificació per a condicions de referència. A nivell de conca, es volien definir els factors que determinen la distribució longitudinal de la diversitat de les comunitats de diatomees. Finalment, a nivell d'hàbitat es van determinar quins factors afecten les algues i els cianobacteris a aquesta escala i es va examinar la contribució relativa de l'ambient i l'espai en la distribució de la biomassa i composició d'algues i cianobacteris. Per tant, els diferents capítols d'aquesta tesi han estat desenvolupats seguint aquest esquema. / This thesis deals with the hierarchy and heterogeneity of stream systems affecting the structure of benthic diatom communities. At a regional level, I search for different groups of sites and their indicator taxa, I studied the responses of the diatom communities to the gradients of environmental variables, I tested the usefulness of diatom indices and I searched for the best classification system for reference conditions. At a watershed level my interest was to define the factors that determined the longitudinal distribution of diversity of diatom communities. Finally, at a habitat level it was interesting to determine the factors affecting algae and cyanobacteria at this scale and examine the relative effects of environmental factors and space on the distribution of biomass and composition of benthic algae and cyanobacteria. Thus, the different chapters of the thesis had been approached following this scheme.

Abstract: Acidification was categorized as the main environmental problem in Scandinavia during the 1960’s. Fortunately for Sweden, as with other countries in Scandinavia, has shown a process of recovery from acidification, by emission control. Further Sweden has had an extended liming program to mitigate the effects from acidification. Regarding the acidification assessment of the EU Water Framework Directive, it requires that EU members attain a ‘good ecological status’ in their surface waters. The status is defined as a deviation from a reference value and this is achieved using a reference reflecting a preindustrial state. As the waters are recovering from acidification the liming program can be reduced. Hence, there is a need to develop tools that can be used for decisions to stop liming in single waters. This study states three approaches: the well known hydrochemical model MAGIC, a meta-MAGIC model which calibrates the reference value computed by MAGIC model and paleolimnology studies. The latter is the key because it is the one that measures the reference value by immediate samples insitu. However, all methods have advantages and disadvantages, which allowed the development of an additional tool called meta-paleo for the same purpose. This meta-paleo model is designed based on an 11 years mean of contemporary water chemistry and paleolimnology data of 71 lakes. This tool for acidification assessment enables to work with few parameters of water chemistry. However it is concluded that the model has uncertainties, which should be evaluated so it can be used as a tool for decision making.

Discriminer l'influence des activités humaines de celle des processus naturels sur les changements environnementaux récents est un enjeu scientifique important. Dans ce but, les mollusques et les foraminifères fossiles des Pertuis Charentais (ouest de la France) ainsi que les sédiments déposés pendant l'Holocène dont ils sont issus ont été étudiés. L'objet d'étude central est un drapage vaseux qui constitue une grande partie du comblement sédimentaire terminal des Pertuis. Les résultats obtenus montrent qu'il est composé de sédiments fins d'origine continentale déposés à partir de 1400 AD. Il est la conséquence d'une augmentation de l'érosion des sols, favorisée par la déforestation entreprise au Moyen-Age. Le taux de sédimentation de cette vase a augmenté brutalement, suite à une période d'augmentation des précipitations hivernales à la fin du Petit Age Glaciaire qui a accéléré l'érosion des sols sur ces territoires fragilisés car déforestés. Le dépôt brutal de sédiments fins dans les Pertuis Charentais a eu peu de répercussions sur les communautés de mollusques benthiques, excepté l'extinction locale du bivalve \textit{Lepton squamosum} de la baie de Marennes-Oléron. En revanche, l'augmentation des apports sédimentaires a été à l'origine d'une succession écologique au sein des communautés de foraminifères (résistance - perturbation - adaptation). Les résultats obtenus démontrent comment des milieux perturbés par les activités humaines deviennent plus sensibles aux changements climatiques. Ils soulignent aussi le potentiel de la paléoécologie dans la compréhension des changements environnementaux récents dans les zones côtières à une échelle millénaire à séculaire. / Unraveling the respective influence of human activities and natural processes on recent environmental changes is a critical issue. In this respect, fossil molluscs and foraminifers of the Pertuis Charentais area (western France) as well as the sediments deposited during the Holocene they originate from have been studied. The study is focused on a mud drape that corresponds to the upper, most recent sediment infill of the area. The results show that it is composed of fine grained sediments originating from the adjacent catchments deposited from 1400 AD onwards. This major environmental change was the consequence of an increase in soil erosion promoted by intense deforestation started during the Middle Ages. Mud sedimentation rate increased suddenly in ca. 1760 AD, owing to a short-lived increase of winter rainfall which triggered more intense soil erosion on vulnerable deforested lands. The sharp deposition of fine grained sediments in the Pertuis Charentais has had few consequences on the past benthic mollusc communities, except the local extinction of the bivalve \textit{Lepton squamosum} in the Marennes-Oléron Bay. On the contrary, the increase in mud supply has triggered an ecological succession among benthic foraminifer communities (resistance - disturbance - adaptation). As a whole, the results demonstrate that environments disrupted by human activities become more sensitive to high-frequency climate changes. They also highlight the potential of paleoecology for a better understanding of recent environmental changes occurring within coastal areas at a millennial to centennial scale.

Today, the study of fluvial-morphological processes is focused on evaluating hydromorfological status of streams and on proposing restoration measures. A fundamental prerequisite for assessing the current hydromorphological status of streams is establishing reference conditions for each stream type that serve as a benchmark and represent the target status after restoration. The aim of this thesis is to describe type-specific hydromorphological reference conditions for rivers on the territory of the Czech Republic with the help of determining river types, developing the REFCON method for establishing reference sites and recording characteristics of reference status. The approach to establishing reference sites is based on meeting the criteria of having minimal anthropogenic impact that are first assessed using cartographic data and subsequently verified through field survey. Parameters - altitude, sinuosity, and valley floor slope - for classifying river reaches into types were determined on the basis of the results of statistical methods applied on 3197 river reaches covering the whole territory of the Czech Republic. The classification of river reaches into 9 river types was verified through field survey at 44 sites. Detailed field survey and measurements of characteristics of natural channel...

This paper looks at the intersections of nature and culture through a study of forest ecosystem restoration efforts in the Ouachita National Forest (Arkansas and Oklahoma). Ecosystem restoration goals are often informed by a pre-European settlement (PES) condition, with an implicit (and occasionally explicit) assertion that such conditions are both more natural than and preferable to the contemporary state. In many cases resuming pre-suppression fire regimes remains a key mechanism for achieving this restored condition. This study’s three main objectives include: (1) determining how PES benchmarks arose in restoration thought, (2) examining how the choice to use a PES benchmark is influenced by culture, and (3) evaluating the pragmatism of including a PES benchmark in restoration projects. The issues of the naturalness of PES conditions, along with the cultural implications of adopting a PES benchmark, are critically examined against the backdrop of historic legacies of fire suppression and paleoecological change. Normative balance-of-nature ideas are discussed in light of their influence on natural resource management paradigms. Linkages are drawn between PES conditions and forest health. Evidence supporting the ecological resilience associated with PES vegetation communities is considered alongside the anticipation of future forcing factors. The idea that restored forests represent an ecological archetype is addressed. Finally, an alternative explanation concerning the tendency of ecosystem restoration efforts to converge on a single historic reference condition – a point of equifinality – is weighed against notions of: (1) anthropic degradation, (2) a regional optimum, and (3) a socially-constructed yearning for a frontier ideal. Because of the unique convergence between historical human activities and natural processes, contemporary culture has conceived of the PES time period as a sort of frontier ideal. The creation of PES benchmarks appears to be an unintentional consequence of attempts to restore forest health rigorously defined by biometric standards. This study offers, to restoration thinking, a framework for critically evaluating the inclusion of historic reference conditions and a means of responding to criticism surrounding their use. This study's findings rest on evidence gathered from paleoecological and historical biogeography data, interviews, archival materials, cultural landscape interpretation, landscape and nature-based art, and complexity theory.

Sediment records of two Italian subalpine lakes (Lake Garda and Lake Ledro) were analyzed in order to reconstruct their ecological evolution over the past several hundred years. A multi-proxy and multi-site approach was applied in order to disentangle the effects of local anthropogenic forcings, such as nutrients, and climate impacts on the two lakes and their catchments. Biological indicators (sub-fossil pigments, diatoms and Cladocera) were used to reconstruct changes in the aquatic food web and to define the lake reference conditions, while geochemical methods, i.e. wavelength-dispersive X-ray fluorescence spectroscopy (WD-XRF), were used to provide quantitative information on the different physical or chemical processes affecting both lake and catchment systems. Sub-fossil pigments and diatoms, together with their respective inferred TP values, suggested very stable oligotrophic conditions in both lakes until the 1960s. The period following was affected by nutrient enrichment, which led to a drastic shift in the phytoplanktonic community. The response of sub-fossil pigments and diatoms to major climatic anomalies such as the Medieval Climatic Anomaly (MCA) and the Little Ice Age (LIA) were not pronounced, and the taxonomic composition remained relatively stable. On the contrary, these proxies showed an indirect response to climate variability since the beginning of the nutrient enrichment phase in the 1960s. In Lake Garda, the winter temperature regulates the water column mixing, which in its turn controls the degree of nutrient fertilization of the entire water column, and the related phytoplankton growth. In Lake Ledro a rapid reorganization of planktonic diatoms was observed only during the temperature recovery after the LIA, while recent temperature effects are masked by the prevailing nutrient effects. In Lake Garda, Cladocera remains responded in quantitative and qualitative terms to climatic changes, whereas in Lake Ledro they appeared to be mainly affected by variations in hydrological regimes, i.e. flood events. Cladocera remains corroborated the nutrient enrichment after the 1960s in both lakes as inferred by diatoms and pigments. In Lake Garda, the geochemical data showed a pronounced shift in elemental composition since the mid-1900s, when major elements and lithogenic tracers started to decrease, while some elements related to redox conditions and other (contaminant) trace elements increased. The general trends since the mid-1900s agree with the biological records. However, some differences recorded in the two different basins of Lake Garda reflected the effects of local conditions, both related to hydrology and sedimentation patterns. Lake Ledro showed higher short-term variability for most elements, even though some features were comparable to Lake Garda. The geochemical record of Lake Ledro revealed a major influence of human-induced lake-level fluctuations and catchment properties. This paleolimnological study allows us to place temporally restricted limnological surveys into a longer-term secular perspective, which is highly valuable for the definition of lake reference conditions. Because the restoration targets are usually based on the lake reference conditions, this study highlighted also the necessity to pay particular attention to the lake-specific sensitivity patterns. The multi-proxy and multi-site approach showed that the lake conditions of large and deep lakes in northern Italy, such as Lake Garda, are mainly driven by nutrient enrichment and/or climate change. In contrast, smaller lakes with larger catchment areas, such as Lake Ledro, are seemingly more impacted by conditions and processes occurring in the drainage basin.

No description available.