Agriculture is a crucial component of the economy of Texas with millions of pounds of peanuts, cotton, wheat, and corn produced annually. However, Texas agricultural crops are not exempt from pathogens, especially Sclerotinia minor Jagger, which was introduced into Texas approximately 25 years ago. A dramatic increase in S. minor disease incidence in the High Plains of Texas during 2004 provided the basis for this study of the pathogen populations in Texas. To characterize the S. minor populations in Texas, aggressiveness and fungicide sensitivity assays were conducted to assess phenotypic characteristics as well as the use of five microsatellite markers to genotypically characterize the pathogen. A large diversity among the populations was found for the phenotypic characteristics; however, there was no evidence that a genotypically unique, highly aggressive, and fungicide resistant "super pathogen" had been introduced or evolved. The populations of S. minor in Texas were moderately aggressive (26.15% of infected tissue), but there were also isolates found that have the inability to infect peanuts (less than 3% of infected tissue) as well as highly aggressive pathogens with theAll fungicides tested were effective in limiting the growth of the pathogen; however, there were significant differences in the effectiveness of the fungicides. Thiophanate-methyl and dichloran were the least effective fungicides in inhibiting the growth of S. minor while boscalid, iprodione, and fluazinam were the best. Fluazinam exerted the most lasting suppressive effect on pathogen. A positive correlation between aggressiveness and fungicide sensitivity to fluazinam and boscalid was found; therefore, no ecological tradeoff was found when increasing these two phenotypic characteristics. Whereas extensive genotypic diversity (50 unique genotypes) was found in Texas, the predominate pathogen was a clone. Genotype TX1 was a clone that accounted for more than 48% of genotypes in Texas populations, identified in all of the sampled counties. The index of association demonstrated that there was a lack of gene flow occurring in the S. minor populations, therefore confirming that the pathogen reproduced primarily through mycelogenic germination. ability to infect more an 55% of the leaflet surface.

Thesis (M. App. Sc.)--University of Queensland, 2001. / Includes bibliographical references.

Thesis (M.Sc.). / Written for the Dept. of Plant Science. Title from title page of PDF (viewed 2009/06/23). Includes bibliographical references.

Control of Taraxacum officinale (dandelion) and other broadleaf weeds in turfgrass has been readily achieved with phenoxy herbicides, but the herbicide option has been revoked in many regions, necessitating alternative weed control strategies. One biological alternative is Sclerotinia minor, an Ascomycete fungus. The impact of S. minor on broadleaf weed dynamics and biotic interactions were studied in a turfgrass environment. The goal was to maximize effectiveness of a S. minor formulation as a biocontrol of dandelion using an ecological approach. S. minor efficacy was not affected by turf microenvironments and was similarly efficacious with spring or fall application. All accessions from a worldwide collection of dandelion and 32 turfgrass broadleaf species were susceptible to S. minor. Biocontrol efficacy was inversely correlated with dandelion age, but efficacy on all ages was enhanced in the presence of grass competition. When combined with regular mowing at 7-10 cm, the S. minor suppressive effect on dandelion was similar to the herbicide effect, particularly in the following season. Weed suppression was less with close mowing at 3-5 cm due to increased dandelion seedling recruitment. While spring herbicide application was effective to suppress dandelion population, the S. minor treatment has no residual activity, necessitating a second application to suppress seedling recruits. Root regrowth after S. minor infection was minimal and was further reduced in superior quality turf after season-long mowing, and after spring applications. S. minor infected dandelion seeds, reduced the dandelion seedbank, and reduced dandelion seedling emergence by 98%. S. minor did not affect the emergence or the total biomass of cool season temperate turfgrass species. Turfgrass quality was improved following S. minor application and populations of other broadleaf weeds were also controlled by S. minor. Understanding the biotic interactions within the turfgrass environment has rewardingly lead to successful integration of the S.minor biocontrol with the common management tools of mowing and over-seeding to achieve excellent control of dandelion and a healthy thriving turf.

No description available.

The general aim of this research was to analyse the genetic diversity in Sclerotinia species. More specifically the aims of this research were: to separate the three species of Sclerotinia, S. sclerotiorum (Lib.) de Bary, S. minor Jagger and S. trifoliorum Erikss.; to determine the breeding mechanism in S. minor and S. sclerotiorum; to test S. minor for the possibility of causing head rot of sunflower; to examine isolate of S. sclerotiorum from sunflower for aggressiveness and to see if this correlates with underlying genetic diversity. Sclerotinia species were separated using a variety of morphological and molecular criteria. S. minor, S. sclerotiorum and S. trifoliorum were analyzed on characters including host, sclerotial diameters, ascospore morphism, breeding type and RFLP analysis. Cloned DNA fragments from S. sclerotiorum were used as probes, these were compared with a cloned rDNA probe from Neurospora. These probes enabled clear separation of the Sclerotinia species. Sclerotial diameters appear to be good criteria for separating S. minor from S. sclerotiorum and S. trifoliorum. Host species may be sufficient criteria for separating S. sclerotiorum and S. trifoliorum for the plant pathologist in the field, however it was inadequate to accurately separate all isolates. S. minor and S. sclerotiorum were found to be homothallic ascomycetes. Apothecia were raised from all eight ascospores of a single tetrad from four isolates of S. minor and from an isolate of S. sclerotiorum indicating that inbreeding may be the predominant breeding type mechanism of S. minor. Ascospores from asci of S. minor and S. sclerotiorum were predominantly monomorphic, but rare examples of ascospore dimorphism similar to S. trifoliorum were found. Ascospores of S. minor were shown to be capable of causing head rot of sunflower (Helianthus annuus L.) when inoculated onto the floral face during anthesis. This is the first record of the carpogenic germination of S. minor in Australia and demonstration of infectivity of the ascospores on sunflower. Isolates of S. sclerotiorum differ significantly in aggressiveness on sunflower. One hundred and twenty isolates were collected from head and basal stem rots of sunflower in two locations in south east Queensland. The inoculation of sunflower stems with mycelial plugs and the measurement of lesion development were found to be reliable and revealed differences in lesion lengths produced by the different isolates. The time of assessment after inoculation was found to be of significance. Assessment two days after inoculation was more reliable than after three days or the linear rate of lesion development. The significant differences between isolates indicated that the pathogenicity testing method would also be good for virulence testing. The significant differences between the isolates however, was not consistent with repetition and division of the isolates into groups with different aggressive levels was therefore not possible. Differences in aggressiveness were more indicative of a continuous variation in pathogenicity rather than discrete aggressive groups. The number of significantly different isolates was most associated with the statistical test employed. The different multiple comparison procedures used made more difference in interpretation of aggressiveness than the data itself. Isolate aggressiveness did not correspond to the location of collection. Isolates collected from both head and basal stem rots were capable of causing stem infections therefore no specificity for mode of reproduction or infection was found. S. sclerotiorum attacking sunflower in Queensland and New South Wales was found to belong to one large population. Hierarchical sampling only detected one example of a plant lesion infected by more than one genotype. Thus most diseased plants are the result of a single infection only. Population substructuring could not be detected using 11 single copy Restriction Fragment Length Polymorphism (RFLP) loci, suggesting gene flow occurs within the Australian population. Mycelial Compatibility Groups (MCGs), Random Amplified Polymorphic DNAs (RAPDs) single and multicopy RFLPs analysis indicated differences amongst the genotypes identified by each criteria. From 120 isolates the number of genotypes ranged from 13 to 24 depending on the marker used. However there were many similarities in the assemblages of isolates within each genotype. Genotypic diversity could not be correlated with aggressiveness. Initial mode of infection could not be correlated with genotypic differences. Genotypes were also not specific to geographic locations around Australia. However, genotypes identified in Australia were unique from genotypes identified in Canada and United States. Temporal studies also indicated a single population as genetic uniformity was maintained between years. Frequent recovery of the same genotypes around Australia suggests a clonal population structure. The Australian S. sclerotiorum population attacking sunflower appears to have a large asexual component most likely due to the sclerotial production and homothallic sexual reproduction. Gametic disequilibrium was found for all the populations. However, clonal correction of the samples meant that the majority of populations were not at gametic disequilibrium, indicating random associations among loci. Therefore genetic exchange and recombination would appear to be a component of the reproductive cycle of S. sclerotiorum in Australia.

<i>Sclerotinia minor</i> Jagger is a fungal pathogen of cultivated peanut (<i>Arachis hypogaea</i> L.) that can cause crop losses in excess of 50%. Fungicides are not completely effective at controlling the disease and can cost up to $311 per hectare for three applications. The ability to produce oxalic acid is necessary for the pathogenicity of some <i>Sclerotinia</i> spp. With little to no naturally occurring resistance to Sclerotinia blight in <i>Arachis</i> spp., a biotechnological approach was used to confer resistance to the disease. Peanut plants were transformed with a gene from barley encoding oxalate oxidase, an enzyme that degrades oxalic acid. Transformed peanuts showed resistance to S. minor and increased yields under disease pressure compared to the parental lines. Before the resistant varieties can be marketed, they must be reviewed and approved by the governmental regulatory system. Responsibility for regulation of transgenic plants in the U.S. is shared among the U.S. Department of Agriculture (USDA) through the Animal and Plant Health Inspection Service (APHIS), the Food and Drug Administration (FDA), and the Environmental Protection Agency (EPA). These agencies require several different data sets including molecular characterization and field studies before each transformation event can be commercialized. This project was designed to characterize three different transformation events, N70, P39 and W171. Molecular characterization included determination of insertion number, copy number, intactness of the expression cassette and stable inheritance of the transgene. N70 was found to have two insertions and two copies while W171 had one insertion with one copy. The P39 event has two insertions and two or more copies. Each of the three events was stable over multiple generations. Phenotypic comparisons of each transgenic line to the parent cultivar were carried out in field studies. Characteristics such as oxalate oxidase expression, yield and quality, hay quality, disease occurrence, aflatoxin content and plant height were assessed. Transgenic peanuts showed few differences from the parent cultivar other than resistance to Sclerotinia blight and yield under disease pressure. Outcrossing studies were completed to determine the rate and distance of cross pollination. Outcrossing rates in N70, P39 and W171 were less than 2.5% and occurred up to 19 rows or 17.4 m from the nearest transgenic row. The molecular characterization and field performance of N70, P39 and W171 have been assembled into a document to petition APHIS for determination of non-regulated status. / Master of Science in Life Sciences