Bibliography: leaves 206-263. / xviii, 313, [5] leaves : ill. (some col.) ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / The aim of this project was to develop tools to assist in the construction of the ovine genome map so economic trait loci in sheep can be identified. (abstract) / Thesis (Ph.D.)--University of Adelaide, Dept. of Animal Science, 2001

Thesis (Ph. D.)--University of Wisconsin, 1966. / Typescript. Vita. eContent provider-neutral record in process. Description based on print version record. Includes bibliographical references.

Bibliography: leaves 206-263. The aim of this project was to develop tools to assist in the construction of the ovine genome map so economic trait loci in sheep can be identified. (abstract)

Coopworth sheep, a newly available genotype, were compared with other genotypes in two trials to assess cumulative lamb and wool production and contributing components related to survival, reproduction and growth, and for the effects of ewe body weight on reproductive traits. In a third trial, various genotypes generated in the process of upgrading native Kaghani sheep, were evaluated for lamb and wool production. In the first two trials six ewe genotypes, generated by mating Coopworth (C), Polypay (P) and Suffolk (S) rams to Polypay and Coopworth-type ewes, were exposed to Hampshire rams for spring lambing from 1986 through 1990. Overall conception rate averaged 96% and ranged from 93% for S X C ewes to 97% for P X C ewes. Sire breeds were not different in ovulation rate but daughters of Polypay dams averaged .18 higher ovulation rate than daughters of Coopworth dams (P<.05). Uterine efficiency for twin ovulators was .86 with little variation among sire breeds; however, daughters of Polypay ewes had a mean uterine efficiency of .93 compared to .78 for daughters of Coopworth ewes (P<.05). Mean litter size at birth averaged 1.63 and ranged from 1.45 for C ewes to 1.75 for S X P ewes. Ewes from Polypay dams had higher mean litter size (P<.01) than those from Coopworth dams (1.73 vs 1.54), but differences between sire breeds were not significant. Ewes from Suffolk sires weaned the heaviest lambs while ewes from Polypay sires weaned the greatest number of lambs, resulting in similar weight of lamb weaned per ewe mated. Adjustment of lamb production for ewe metabolic body size resulted in Coopworth-sired ewes being more efficient than the heavier Suffolk-sired ewes. Coopworth-sired ewes produced 32% more wool than ewes sired by the other two breeds. Combining lamb and wool production in an index resulted in a range of less than 2% among sire breeds for gross productivity per ewe mated. Productivity of Rambouillet ewes studied under Pakistani conditions declined significantly over time. Crossbred lambs were generally heavier at weaning than Rambouillets, while wool production was highest in purebred Rambouillet ewes followed by genotypes related closely to Rambouillets. In all trials crossbreds generally excelled purebreds in overall productivity; the degree of superiority depended on genotypes involved in the crosses. / Graduation date: 1991

"March 2004" / Bibliography: leaves R1-24 / xix, 209 p., A54, R24 leaves : ill. (some col.) ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / "This thesis describes two models developed to investigate the effect of maternal feed intake on muscle cellularity and myogenic gene expression of fetal sheep." --p. vi.

Wool from Merino sheep is an important component of the Australian economy. However, little is known of the mechanisms within the wool follicle that regulate fibre production. The aim of the research described here was to identify and characterise some of the genes expressed in the follicle.A highly expressed gene has been identified from skin and sequenced. The information obtained on this gene suggests that it might be of use in future transgenic studies. Two cDNA libraries were constructed. The first was constructed using small amounts of total RNA from skin and PCR methodology, following a published method. A second cDNA library was then produced from adult mid-flank skin using a commercially available kit. A pool of 420 potential wool follicle specific transcripts were identified from this adult mid-flank skin cDNA library using a combination of differential and subtractive screening. Clone 1-25 was chosen as the focus for the remaining work described in this thesis. Expression of clone 1-25 was detected at all stages of wool follicle development and was localised to the wool follicle bulb, inner root sheath, outer root sheath, epidermis, but not the dermis or dermal papilla. The function of clone 1-25 is as yet unknown. However, from its expression in the wool follicle, and studies by other groups, it appears that it may play a role in inducing differentiation / Doctor of Philosophy (PhD) (Biological Sciences)

Expression of membrane-type matrix metalloproteinases (MT) and tissue inhibitors of matrix metalloproteinases (TIMP) was evaluated in sheep embryos and uterus during the pre- and peri-implantation periods. Embryos and uterine samples were surgically collected from ewes on days 9, 11, 13, and 15 of pregnancy (n=3 ewes/day) and of the estrous cycle (n=2 ewes/day). Total RNA was extracted and RT-PCR were performed using primers specifically designed from published human, mouse, and bovine complete cDNA sequences for MT-1, -2, -3, and -5, and TIMP-1, -2 and -3. Multiplex PCR were performed on uterine samples for each gene at optimal cycles and temperatures with 18S rRNA as the internal standard. For embryos, PCR were conducted for 40 cycles at optimal temperatures. MT-1, -2, -3, and -5 were observed in pregnant and nonpregnant uterus during all days of collection. No difference (P>0.10) was observed in MT-1 or -2 expression due to day of collection. However, pregnant uterus expressed more (P=0.096) MT-1 than nonpregnant uterus, whereas expression of MT-2 was greater (P<0.05) in nonpregnant compared to pregnant uterus. No differences (P>0.10) in MT-3 expression were observed due to pregnancy status, however Day 9 and 11 expressed more MT-3 than Day 15. Uterine MT-5 expression was not different (P>0.10) between pregnant and nonpregnant females, however Day 15 uterus expressed less (P<0.05) MT-5 then Day 11 and 13 uteri. TIMP-1 expression was greater (P<0.05) in pregnant compared to nonpregnant uterus, but did not differ (P>0.10) by day of collection. TIMP-2 did not differ (P>0.10) by pregnancy status or day of collection but the interaction was significant (P<0.05). TIMP-2 expression was greatest in Day 9 pregnant uterus and least in Day 9 nonpregnant uterus. No difference (P>0.10) was observed in expression of TIMP-3 due to day of collection or pregnancy status. Embryos expressed MT-3 and -5 during Days 9-15 of development, however, MT-1 and -2 were not detected. The presence of MT and TIMP in the endometrium suggests these proteins may play important roles in regulating extracellular matrix degradation and activating other matrix metalloproteinases for endometrial remodeling and preparation for implantation. Embryonic MT may participate in the processes of embryonic expansion, elongation and attachment. / Graduation date: 2002

Thesis (MScAgric)--Stellenbosch University, 2013. / ENGLISH ABSTRACT: Genetic (co)variances for body weight, clean fleece weight and fibre diameter were estimated for the South African Dohne Merino using data transformed as proportions of contemporary group means. The data analysed included body weight, clean fleece weight and fibre diameter records for 282 513 animals, evaluated between 1992 and 2011. There were 5 698 sires, 105 886 dams and 6 291 contemporary groups in the data. A three-trait animal model was fitted, where the random variables were the direct additive genetic effects, as well as the sire-flock-season (SFS) interaction, while the fixed effects included contemporary groups (FYSSM) (6 291 classes), birth status (single, twins or triplets), age of dam (1 to 3 years), which was plotted as a linear regression as well as age at performance measurement, which was fitted as a polynomial. The direct heritability estimates (SE) for body weight, clean fleece weight and fibre diameter were 0.265 (0.005), 0.210 (0.004) and 0.437 (0.005), respectively. Genetic correlations for body weight with clean fleece weight and fibre diameter were 0.035 (0.015) and 0.139 (0.011), respectively, while the genetic correlation between clean fleece weight and fibre diameter was 0.169 (0.012). Body weight had phenotypic correlations of 0.327 (0.002) and 0.150 (0.002), respectively, with clean fleece weight and fibre diameter, which had a phenotypic correlation of 0.190 (0.002) with clean fleece weight. The moderate to high heritability estimates suggests that there is substantial genetic variation, which may result in genetic improvement if selection is applied on these traits. Genetic correlations were generally low, suggesting that progress in all these traits was possible in a scientific selection program. Genetic trends derived during the study supported the contention that genetic progress in all traits was attainable in a well-constructed breeding programme. Transformation of the data to percentages of contemporary groups resulted in adjustments to breeding values. The breeding values for sires originating from flocks maintained in limiting environments (Low group; 180 sires) were adjusted upwards, while those of sires originating from a non-limiting production environment (High group; 146 sires) were adjusted downwards. These effects were markedly obvious for the quantitative traits (body weight and clean fleece weight), but to a much lesser extent for fibre diameter. This transformation resulted in the genetic trends for the Low groups being adjusted to be comparable to those in the High group for body weight and Fibre diameter. It was concluded that sire breeding values derived from transformed data would be more robust across the typical diverse environments supporting local Dohne Merino production. The genetic value of animals entering the recorded population from a commercial base (F4 animals) was below the fully recorded part of the population. The inclusion of phantom parent groups in the genetic analysis rendered genetic trends in F4 animals comparable to that of the pedigreed portion of animals in the analyses. It was concluded that animals from a commercial base (which are alleged to have advantages in terms of fitness and robustness) were more likely to perform satisfactorily for selection with the inclusion of phantom groups than without it. It was recommended that data in the national Dohne Merino analysis be transformed proportion of contemporary group means to account for heterogeneous contemporary group variances. Phantom parent groups should also be applied to the analysis to increase the probability of those animals entering the breeding flock from a commercial base being selected. / AFRIKAANSE OPSOMMING: Genetiese kovariansies vir liggaamgewig, skoonvaggewig en veseldikte is vir die SA Dohne Merino bevolking in Suid-Afrika beraam nadat data getransformeer as ‘n proporsie van die kontemporêre groep gemiddelddes uitgedruk is. Die data het rekords in van liggaamsgewig, skoonvaggewig en veseldikte van 282 513 diere oor die tydperk van 1992 tot 2011 ingesluit. Die data sluit rekords van 5 698 vaars, 105 886 moers en 6 291 kontemporêre groepe in. 'n Meer-eienskapdieremodel met 'n additiewe diere-effekte sowel as 'n vaar-kudde-seisoen (SFS) interaksie is as ewekansige effekte gemodelleer, bykomstig tot die vaste effekte van kontemporêre groep (FYSSM) (6 291 klasse), geboortestatus (enkelling, tweeling of drieling), ouderdom van moer (1 tot 3 jaar) gepas as 'n lineêre regressive, sowel as ouderdom by prestasie meting as ‘n polinoom gepas. Die beraamde direkte oorerflikheid (SF) van liggaamgewig, skoonvaggewig en veseldikte van die meereienskap dieremodel was onderskeidelik 0,265 (0,005), 0,210 (0,004) en 0,437 (0,005). Die genetiese korrelasies van liggaamsgewig met skoonvaggewig en veseldikte was 0,035 (0.015) en 0,139 (0.011) onderskeidelik, terwyl die genetiese korrelasie tussen skoonvaggewig en veseldikte 0,169 (0.012) beloop het. Liggaamsgewig het onderskeie fenotipiese korrelasies van 0,327 (0.002) en 0.150 (0.002) met skoonvaggewig en veseldikte gehad, terwyl skoonvaggewig ‘n fenotipiese korrelasie van 0.190 (0.002) met veseldikte gehad het. Die medium tot hoë oorerflikheidhede dui daarop dat daar aansienlike genetiese variasie voorkom, wat kan aanleiding gee tot genetiese vordering as seleksie op die eienskappe toegepas word. Genetiese korrelasies was oor die algemeen laag wat daarop dui dat vordering in al die eienskappe deur ‘n wetenskaplike seleksie program moontlik is. Die aanspraak is deur genetiese tendense in die studie bevestig. Die transformasie van data na proporsies van kontemporêre groep gemiddeldes het daartoe gelei dat teelwaardes aangepas word. Die teelwaardes van vaars uit kuddes met ‘n omgewing wat beperk word (Lae groep:180 vaars), is opwaarts aangepas. Daarenteen is vaars uit 'n nie-beperkende produksie omgewing (Hoë groep:146 vaars) se teelwaardes afwaarts aangepas. Hierdie effekte was veral ooglopend vir die kwantitatiewe eienskappe, liggaamgewig en skoonvaggewig, maar tot 'n mindere mate vir veseldikte. Die transformasie het daartoe gelei dat die genetiese tendense for die Lae groep aangepas word om vergelykbaar te wees met die Hoë groep vir liggaamsgewig en skoonvaggewig. Die gevolgtrekking was gemaak dat meer toepaslike vaar teelwaardes, bereken vanaf getransformeerde data, verkry word vir regoor die diverse omgewings wat produksie van plaaslike Dohne Merinos ondersteun. Die genetiese waarde van diere wat die aangetekende populasie uit ‘n kommersiële agtergrond (F4 diere) binnekom was laer as die volledig aangetekende gedeelte van die populasie. Die insluiting van skimgroepe in die genetiese ontleding het tot genetiese tendense gelei wat die F4 diere vergelykbaar gemaak het met diere in die ontleding wat wel stamboekinligting het. Die gevolgtrekking is gemaak dat diere van ‘n kommersiële agtergrond (wat aanvaar word om voordele in te hou in terme van fiksheid en robuustheid) meer geredelik geselekteer sal word vir die stoet met die insluiting van skimgroepe as daarsonder. Dit word aanbeveel dat die data in die Nasionale Dohne Merino na proporsies van die kontemporêre groepgemiddeldes getrensformeer word om vir heterogene kontemporêre groep variansies voorsiening te maak. Skimgroepe moet ook gepas word in die ontleding om die waarskynlikheid te verhoog dat diere vanuit 'n kommersiële basis, ook geselekteer sal word.

Thesis (PhD (Animal Sciences))--Stellenbosch University, 2011. / ENGLISH ABSTRACT: The Dorper sheep breeders developed their own linear type scoring system based on a 5-point scale which assesses Conformation, Size, Type, Fat distribution and Colour. For many decades Dorper sheep breeders have been so consistent with adherence to these breed standards without paying much attention to performance testing of their stud animals. However, there is a paucity of information pertaining to the genetic relationships between visually assessed traits and objectively measured growth, reproduction and fitness traits in the breed. Slow genetic gains in Dorper production traits are assumed to be caused by over-accentuation of type traits but those assumptions needed to be scientifically validated. It was therefore vital to derive these relationships as they could have a negative impact on genetic progress in the event that some antagonisms existed. Against this background, the major objectives of this study were to estimate genetic parameters and trends for production, reproduction, fitness and subjective traits using data extracted from National Small Stock Improvement Scheme (NSIS). Furthermore, the study correlated performance data with subjectively assessed traits to derive genetic relationships between them to establish the effect of selecting Dorper sheep on breed standards has on objective traits of economic importance. Genetic parameters and relationships were estimated for subjectively assessed and objectively measured traits using linear and threshold methods. Linear methods were applied via the implementation of Residual Maximum Likelihood (REML) procedures and Bayesian methods were implemented through Gibbs sampling. It was established through the implementation of single-trait and multi-trait analyses that live weight and growth traits were moderately to highly heritable. Maternal effects were also significant for such traits. Subjectively assessed traits were demonstrated to be lowly to moderately heritable using both linear and threshold methods. There were positive genetic and environmental correlations between live weight, growth and subjectively assessed traits with the exception of Colour. There was favourable selection response to live weight and growth traits in a Dorper flock, with the exception of average daily gain during the post weaning phase where there was a slight negative trend. Subjectively assessed traits with the exception of Size responded favourably to selection. It was concluded that breeders should consider removing Colour from their breeding objectives, and focus more on selecting animals based on BLUP breeding values of objectively measured traits. The across flock genetic evaluation of all Dorper records demonstrated through the implementation of both linear and threshold methods that reproduction and fitness traits were lowly to moderately heritable and exhibited favourable genetic correlations amongst themselves. It was further established that ewe rearing ability, ewe stayability and ewe productive life are lowly heritable and have some favourable correlations with component traits of reproduction. There was little genetic change in reproduction and fitness traits, but traits generally deteriorated where significant trends were found. It was concluded that breeders should select their animals on objectively measured production and reproduction traits and not put as much emphasis on breeding standards. / AFRIKAANSE OPSOMMING: Die Dorper skaaptelers het hul eie liniêre puntestelsel ontwikkel wat op ‘n 5-punt skaal bouvorm, grootte, tipe, vetverspreiding en kleur beoordeel. Dorper skaaptelers se fokus was vir baie dekades om hierdie rasstandaarde na te kom, sonder om aandag te gee aan die prestasietoetsing van hul stoetdiere. Rasverbetering in die Dorperskaapras is gebaseer op subjektiewe beoordeling van eienskappe soos dit in die skouring bepaal word. Daar is egter ‘n gebrek aan inligting aangaande genetiese verwantskappe tussen visueel beoordeelde eienskappe en objektiewe eienskappe soos groei, reproduksie en fiksheid. Dit word aangeneem dat stadige genetiese vordering in produksie-eienskappe van Dorpers deur ‘n oorbeklemtoning van tipe eienskappe veroorsaak word, maar hierdie aannames moet wetenskaplik bewys word. Daarom is dit uiters belangrik om die verwantskappe tussen subjektiewe en objektiewe eienskappe te bepaal, aangesien hulle ‘n moontlike negatiewe effek op genetiese vordering mag uitoefen as daar wel antagonismes bestaan. Teen hierdie agtergrond is die hoofdoelwitte van hierdie studie om prestasiedata vanuit die Nasionale Kleinveeverbeteringskema (NSIS) te onttrek en die beraming van genetiese parameters en tendense vir produksie, reproduksie, fiksheid en subjektiewe eienskappe. Verder het hierdie studie prestasiedata met subjektiewe beoordeelde eienskappe gekorreleer om genetiese verwantskappe tussen subjektiewe en objektiewe eienskappe te bepaal. Genetiese parameters en -verhoudings was beraam vir subjektief beoordeelde en objektiewe gemete eienskappe met die gebruik van lineêre- en drumpelwaardemetodes. Lineêre metodes is toegepas d.m.v die implementering van Residuele Maksimum Waarskynlikheid (REML) prosedures en die Bayesiaanse metodes deur Gibbs steekproefneming. Dit is bevestig dat dat liggaamsgewig en groei-eienskappe matig tot hoog oorerflik is. Maternale-effekte het ook ‘n beduidende invloed op hierdie eienskappe gehad. Subjektiewe eienskappe is laag tot matig oorerflik, volgens beide lineêre en drempelwaarde metodes. Daar was positiewe genetiese- en omgewingskorrelasies tussen liggaamsgewig, groei en subjektiewe eienskappe, met die uitsondering van kleur. Daar was ‘n gunstige seleksie respons vir liggaamsgewig en groei-eienskappe met die uitsondering van gemiddelde daaglikse toename gedurende die na-speense fase wat ‘n afname in die gemiddelde voorspelde teelwaardes getoon het. Subjektiewe eienskappe, met die uitsondering van grootte, het in die studietydperk geneties verbeter. Die gevolgtrekking is dat telers dit moet oorweeg om kleur (subjektiewe eienskap) van hul teeldoelwitte te verwyder en om diere op BLUP teelwaardes van objektiewe eienskappe moet selekteer. Die genetiese evaluasie van die nasionale kudde het getoon dat reproduksie- en fiksheidseienskappe laag tot matig oorerflik is en gunstige korrelasies onderlings toon. Dit is verder bevestig dat grootmaakvermoë, terughouvermoë en produktiewe leeftyd laag oorerflik is, en sekere gunstige korrelasies met die komponente van reproduksie toon. Daar was geen genetiese verandering in reproduksie en fiksheid eienskappe in die nasionale kudde nie, moontlik omdat geen seleksie toegepas is nie, a.g.v ‘n oorbeklemtoning van rasstandaarde. Die gevolgtrekking is dat telers diere moet selekteer gebaseer op produksie en reproduksie eienskappe, en minder klem lê op rasstandaarde.

M.Sc. / The amount of allozyme variation within, and the extent of genetic differentiation between, 19 sheep breeds from southern Africa were determined by six enzyme coding loci. Another eight enzyme coding loci were analyzed for five breeds. Between 55 and 66.67% of the protein coding loci were polymorphic (95% criterion) in all the breeds, except for the Namaqua sheep that were less polymorphic (33.33%). Values of 1.67 to 2.5 were obtained for the mean number of alleles per locus and average heterozygosities per locus was between 16.6 to 35.9%. The allelic constitution particularly at the transferrin (TF) locus varied appreciably for the different breeds. For example, the TF*H allele was exclusively noted in the Dormer sheep and the TF*G allele was found in the Afiino, Van Rooy, Border Leicester, Blackhead Persian and Skilder-Persian breeds. The only polymorphic breeds at the albumin locus were the South African Mutton Merino and Van Rooy breeds. The allelic constitution at the other polymorphic loci was similar for the breeds, but the allele frequencies of the South African Merino differs from Merino breeds in other countries at the TF locus. Unbiased genetic distance values were the smallest between the Dorper and Dormer breeds and the largest between the Romenof and Blackhead Persian breeds, and the mean genetic distance between the 19 breeds was 0.067. The mean amount of differentiation among the breeds relative to ' the limiting amount under complete fixation (F st) was calculated at 0.123, which is an indication of small genetic differentiation between the breeds studied. However, this , statistic is not reflected by the allele distribution that was not identical for 25 breed pairs (15%) of the total (171) at all the genetic blood systems studied. None of the breed pairs showed identical allele distributions at all the loci studied for at least one locus differed at each breed pair compared. Random amplified polimorphic DNA's gave no consistent or repeatable results. The results of the allozyme study presents the first study of the current genetic characterization of the different southern African sheep breeds.