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New algorithms for the analysis of mass spectral profiles from amphibian dataZheng, Huiru January 2002 (has links)
No description available.
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Studies on the biosynthesis of neuropeptidesTerry, Adrian Simon January 1988 (has links)
No description available.
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Skin peptide defences of African clawed frogs (Xenopus laevis) and New Zealand Litoria frogs against bacterial dermatosepticemiaSchadich, Ermin January 2008 (has links)
In frogs, part of the important immune defence system of their skin is the secretion of antimicrobial peptides from granular glands. This study investigated the immune function of skin peptides in protection against bacterial pathogens associated with infectious bacterial dermatosepticemia under a number of environmental conditions and at certain stages of the life cycle of frogs. The natural peptide mixture of skin peptides was collected from skin secretions of three semi-aquatic Litoria frog species L. aurea, L. raniformis and L. ewingii and aquatic Xenopus laevis and assayed for activity against the bacterial pathogens: Aeromonas hydrophila, Chryseobacterium meningosepticum, Citrobacter freundii, Klebsiella pneumoniae, Proteus mirabilis, Pseudomonas aeruginosa and Serratia liquefaciens. The peptide mixtures of three frog species Xenopus laevis, Litoria aurea and Litoria raniformis showed activity against C. freundii, C. meningosepticum, K. pneumoniae and P. aeruginosa in vitro indicating a likely protective function. One Litoria species, L. ewingii, had a peptide mixture that did not have activity against any pathogen. Subsequently, in experimental exposure of animals to the pathogen K. pneumoniae, this species was found to be susceptible to disease while the other sympatric species L. raniformis was found to be resistant. A strong correlation was shown between composition of skin peptides and resistance to disease. A comparison of the production and activity of skin peptides from four frog species showed the aquatic X. laevis to have more effective immune defence against bacterial pathogens than three tested Litoria species. X. laevis produced significantly greater amount of bioactive peptide mixture than three tested Litoria species. Three pathogens A. hydrophila, P. mirabilis and S. liquefaciens are abundant components of the skin microbiota of healthy frogs and were found to be resistant to the peptide mixtures of all four frog species tested. It was shown that one pathogen, A. hydrophila, had the ability to secrete proteases which could inactivate skin peptides. Thus while skin peptides could function against several pathogens, some pathogens might have co-evolved to resist skin peptides. A comparison of the peptide mixtures from skin secretions of adults, metamorphs and larvae of L. ewingii using liquid chromatography-mass spectrometry analyses showed that peptide mixtures of post metamorphic animals, adults and metamorphs, had a species-specific profile that included the antimicrobial peptide uperin 7.1, while the larval peptide mixture did not contain uperin 7.1 or any other known species-specific peptide. This finding indicates the absence of a secretory mechanism that could compensate for the absence of granular glands in larvae. Analyses of the production and activity of skin peptides of L. raniformis after exposure to two different environmental stressors, low environmental temperature and pesticide carbaryl, showed that the total amount of bioactive peptide was significantly reduced which could consequently increase susceptibility to disease. Thus suppression of skin peptides could be a possible mechanism for synergism between the important stressors and pathogens in disease development.
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Aspects of amphibian chytrid infections in South Africa / M.C. GerickeGericke, Maria Catharina January 2008 (has links)
The waterborne pathogen Batrachochytrium dendrobatidis (Bd), amphibian chytrid, is
implicated as being the causative agent for global amphibian declines. The fungus attacks the keratinized skin of adult and postmetamorphic animals and the keratinized mouthparts of tadpoles. Postmetamorphic animals seem to be more susceptible to Bd than tadpoles and adult frogs. Hypotheses exist that the origin of the fungus is in Africa. During the study different aspects of Bd infections in South African frogs were examined including the distribution of Bd, cultivation of Bd, preservation of cultures, the morphology of Bd as an infection as well as in culture and finally differences in host defense. Positive and negative localities for Bd were identified through surveys conducted in South Africa. These data will be contributed to the Bd Mapping Project and the African Bd Database in order to determine whether chytrid has any environmental preferences. Cultures obtained from the positive localities were maintained and cryopreserved for use in numerous experiments. In a future study, DNA extractions from the cultures will be analyzed using multilocus sequence typing in order to determine the sequence type of South African strains in comparison with global strains. This will provide important epidemiological information concerning the origin and control of Bd. The morphology of Bd was also examined using scanning electron microscopy and laser scanning confocal microscopy. Damage due to Bd infections was more severe on the larval mouthparts of Amietia vertebralis than that of Hadromophryne natalensis. The adverse effect of Bd is therefore not limited to postmetamorphic animals. Confocal microscopy uses fluorescent stains and lasers to examine specific structures within organisms. An especially effective stain used during confocal microscopy on Bd is Calcofluor White M2R. Due to its specificity this stain can be used as an effective screening tool for Bd in tissue. The role of antimicrobial skin peptides as a defense against Bd was also examined. A. vertebralis experiences die-offs due to chytrid, while H. natalensis does not experience the same effect in the presence of Bd. H. natalensis possess more antimicrobial skin peptides against Bd with a higher effectiveness than peptides extracted from A. vertebralis. This may explain the observed susceptibility of A. vertebralis to Bd. The relevance of this study is in order to identify areas in South Africa in which the probability of finding Bd is high. This will help in the surveillance of Bd and in the identification of susceptible species to be monitored and protected against the fungus. The effect of Bd on frog species can also be determined by means of exposure experiment using cultures isolated during this study. Through the identification of peptides effective against Bd, predictions can be made with regard to the susceptibility of different frogs to Bd, improving our ability to protect the amphibian biodiversity in South Africa. With the use of confocal microscopy in the examination of Bd, we became the first group to use the method. By the identification of a stain with a high potential as a screening tool, we also contributed to the more efficient identification of Bd in tissue. Keywords: Batrachochytrium dendrobatidis, Bd, amphibian chytrid, distribution, cultivation, antimicrobial skin peptides, laser scanning confocal microscopy, Amietia vertebralis, Hadromophryne natalensis, South Africa / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2009.
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Aspects of amphibian chytrid infections in South Africa / M.C. GerickeGericke, Maria Catharina January 2008 (has links)
The waterborne pathogen Batrachochytrium dendrobatidis (Bd), amphibian chytrid, is
implicated as being the causative agent for global amphibian declines. The fungus attacks the keratinized skin of adult and postmetamorphic animals and the keratinized mouthparts of tadpoles. Postmetamorphic animals seem to be more susceptible to Bd than tadpoles and adult frogs. Hypotheses exist that the origin of the fungus is in Africa. During the study different aspects of Bd infections in South African frogs were examined including the distribution of Bd, cultivation of Bd, preservation of cultures, the morphology of Bd as an infection as well as in culture and finally differences in host defense. Positive and negative localities for Bd were identified through surveys conducted in South Africa. These data will be contributed to the Bd Mapping Project and the African Bd Database in order to determine whether chytrid has any environmental preferences. Cultures obtained from the positive localities were maintained and cryopreserved for use in numerous experiments. In a future study, DNA extractions from the cultures will be analyzed using multilocus sequence typing in order to determine the sequence type of South African strains in comparison with global strains. This will provide important epidemiological information concerning the origin and control of Bd. The morphology of Bd was also examined using scanning electron microscopy and laser scanning confocal microscopy. Damage due to Bd infections was more severe on the larval mouthparts of Amietia vertebralis than that of Hadromophryne natalensis. The adverse effect of Bd is therefore not limited to postmetamorphic animals. Confocal microscopy uses fluorescent stains and lasers to examine specific structures within organisms. An especially effective stain used during confocal microscopy on Bd is Calcofluor White M2R. Due to its specificity this stain can be used as an effective screening tool for Bd in tissue. The role of antimicrobial skin peptides as a defense against Bd was also examined. A. vertebralis experiences die-offs due to chytrid, while H. natalensis does not experience the same effect in the presence of Bd. H. natalensis possess more antimicrobial skin peptides against Bd with a higher effectiveness than peptides extracted from A. vertebralis. This may explain the observed susceptibility of A. vertebralis to Bd. The relevance of this study is in order to identify areas in South Africa in which the probability of finding Bd is high. This will help in the surveillance of Bd and in the identification of susceptible species to be monitored and protected against the fungus. The effect of Bd on frog species can also be determined by means of exposure experiment using cultures isolated during this study. Through the identification of peptides effective against Bd, predictions can be made with regard to the susceptibility of different frogs to Bd, improving our ability to protect the amphibian biodiversity in South Africa. With the use of confocal microscopy in the examination of Bd, we became the first group to use the method. By the identification of a stain with a high potential as a screening tool, we also contributed to the more efficient identification of Bd in tissue. Keywords: Batrachochytrium dendrobatidis, Bd, amphibian chytrid, distribution, cultivation, antimicrobial skin peptides, laser scanning confocal microscopy, Amietia vertebralis, Hadromophryne natalensis, South Africa / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2009.
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