Digitized by Kansas Correctional Industries

Call number: LD2668 .T4 1985 M43 / Master of Science

Striga, a genus of obligate parasitic weeds in the family Orobanchaceae, has been identified as the most important biological factor limiting agricultural productivity in sub-Saharan Africa. Germination of Striga seeds is triggered by strigolactone root exudates from host plants. Strigolactones also induce hyphal branching in arbuscular mycorrhizal (AM) fungi, which are important for plant uptake of phosphorus in low phosphorus soils. Mechanisms of Striga resistance based on reduced strigolactone production may also convey resistance to AM fungi which would require higher inputs of phosphorus fertilizer to attain optimal crop growth. There is evidence for genetic differences in mycorrhizal responsiveness in other grain crops; therefore it is beneficial for breeders to be aware of these differences when developing Striga-resistant sorghum cultivars. This research aims to determine phosphorus and mycorrhizal responsiveness of sorghum genotypes important for or developed by breeders working on Striga resistance. Phosphorus response curves were determined for twelve sorghum genotypes using pasteurized low phosphorus soil amended to achieve four different phosphorus levels. Simple linear regression was performed on root and shoot dry weight data. Results indicate variability in phosphorus responsiveness within Striga resistant and susceptible genotypes. Seven of these genotypes were selected for continued research, which analyzed responsiveness to phosphorous and differences in mycorrhizal responsiveness in relation to reported mechanisms of Striga resistance. Treatments included three levels of phosphorus amendments and the addition of Funneliformis mosseae inoculum. All genotypes were strongly responsive to P amendment when grown without AM fungi and showed a decrease in responsiveness to P when inoculated with F. mosseae. Trends for all genotypes indicate a greater uptake of P, Zn, and Mg by mycorrhizal plants as compared to nonmycorrhizal plants. All seven genotypes were responsive to mycorrhizae, with a significant increase in biomass for all genotypes, especially at the lowest phosphorus level. The responsiveness to the mycorrhizal fungus does not appear to be directly related to the susceptibility of genotypes to the parasitic weed Striga. / Graduation date: 2012

Sorghum (Sorghum bicolor) is the third most important cereal food crop in Uganda. However, the parasitic weed Striga hermonthica severely constraints its production. The use of Striga resistant sorghum varieties may be one of the most feasible ways of managing the Striga problem. A series of studies were carried out with the overall objective to develop new sorghum genotypes that are resistant to Striga and high yielding in Eastern Uganda. Initially, a participatory rural appraisal (PRA) was carried out with the main objectives to study the current constraints faced by farmers in sorghum production and determine their preferences for new sorghum varieties. Secondly, fifty different African sorghum accessions were evaluated to determine phenotypic and genotypic variability for Striga resistance and identify suitable parents to be used in breeding for new Striga resistant and high yielding sorghum genotypes. Thirdly, a genetics study was conducted to determine gene action responsible for Striga resistance and sorghum yield in new sorghum genotypes. Finally, laboratory studies were carried out to identify specific mechanisms of Striga resistance available in new sorghum genotypes and their parents. During the PRA, Striga was identified as the main constraint limiting sorghum production in Eastern Uganda, followed by insect pests. Farmers indicated preference for red gain sorghum with erect and compact heads, a plant height of 1.5m and a maturity period of around three months, as well as Striga resistance and drought tolerance. From farmers’ own assessments, the individual field surveys and soil seed bank analyses that were carried out, the degree of Striga infestation in farmers’ fields was found to be high. Both phenotypic and genotypic factors contributed significantly to the variability observed among the African sorghum accessions with respect to Striga resistance and sorghum crop performance indicating that Striga resistance can be improved through selection. However, techniques that minimise environmental effects need to be employed in order to improve on heritability. The values for genetic coefficient of variation (GCV) and genetic advance (GA) indicated that genetic gain for Striga resistance could be achieved by selection based on area under Striga severity progress curve (AUSVPC), area under Striga number progress curve (AUSNPC) and individual Striga emergence counts. The sorghum accessions SRN39, Brhan, Framida, Gubiye, Wahi, P9407 and N13 were found to be resistant to Striga hermonthica. These accessions consistently showed low AUSNPC, AUSVPC, and individual Striga emergence, Striga vigour and severity indices. These accessions could be used as sources of Striga resistance genes when breeding for Striga resistance in sorghum. In the study to determine gene action responsible for Striga resistance and sorghum yield, significant genetic variation for Striga resistance and sorghum yield parameters was observed among the new sorghum genotypes and their parents. The sorghum parental lines: Brhan, SRN39, Hakika and Sekedo consistently had negative GCA effects for AUSNPC and AUSVPC, while SRN39 and Hakika additionally had negative GCA effects for Striga vigour, indicating that they were effective in transferring Striga resistance into their progeny. The new genotypes: SRS1608, SRS3408, SRS2408, SRS4609, SRS3108, SRS2908, SRS2609, SRS609 and SRS1708 had negative SCA effects for AUSNPC, AUSVPC and Striga vigour meaning that they were resistant to Striga. Sorghum parental lines: Sekedo, Brhan, Framida and Hakika had positive GCA effects for head length, meaning that they increased head length in their crosses. The genotypes: SRS3408, SRS5309, SRS1608 and SRS2908 derived from the above parents had the longest heads compared to other progenies, which were on average, 20% longer than their parents. The genotypes: SRS609, SRS1408, SRS2608 and SRS3408 were the highest grain yielders and yielded 11-51% better than the highest yielding parent (Sekedo) under the non Striga environment. The parental lines; Sekedo, Brhan and Framida had positive GCA effects for grain yield indicating that they could act as sources of genes for grain yield increase. The genotypes; SRS609, SRS4609 and SRS2908 had large positive SCA effects for grain yield. The relative contributions of GCA effects to the observed genotypic variances were 80.5%, 43.3%, 65%, 92.6% and 53.2% for AUSNPC, AUSVPC, Striga vigour, sorghum head length and plant height respectively. This shows that additive gene action was important in controlling Striga resistance, sorghum head length and plant height in the present sorghum populations. Laboratory studies aimed at investigating the specific mechanisms of Striga resistance available in new sorghum genotypes found that two new sorghum genotypes, SRS1608 and SRS1208 expressed both the low germination stimulant character and low haustoria initiation as mechanisms of resistance to S. hermonthica. The sorghum genotypes, SRS2808 and SRS1108, and two fixed lines, Brhan and Hakika expressed only the low germination stimulant character, while the genotypes, SRS608, SRS3408, SRS4109 and SRS2308 expressed only the low haustoria initiation mechanism. The inheritance patterns of the low germination stimulant character in the present sorghum genotypes varied. In some genotypes, it appeared to be controlled by a single gene while in others; it appeared to be controlled by more than one gene. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2011.

Sorghum [Sorghum bicolor (L.) Moench] is a major food security crop for millions of people in sub-Saharan Africa and the fourth most important crop in Africa. The potential sorghum yields are limited due to a number of abiotic, biotic and socio-economic constraints. Among the biotic stresses is the parasitic weed, Striga hermonthica, which inflicts yield losses ranging from 30-100%. Various control options have been recommended to reduce levels of Striga damage. However, these techniques need to be integrated for effective control and to boost sorghum productivity. A series of experiments was conducted to integrate host resistance improvement and the use of a biological control agent, Fusarium oxysporum f.sp. strigae to control Striga hermonthica. These studies were also focused on improving breeders‟ awareness of the traits that farmers‟ desire, on the assumption that farmers‟ variety preference traits are the missing link in technology development and adoption process for S. hermonthica management. The objectives of the study were to: 1) determine farmers‟ views on sorghum production opportunities; threats; indigenous knowledge and perceptions; breeding priorities; Striga infestation; and the coping mechanisms of farmers in the north eastern and north western Ethiopia, 2) evaluate sorghum genotypes for compatibility to F. oxysporum inoculation where grown in Striga infested soil in controlled environments, 3) determine field responses of sorghum genotypes and F. oxysporum compatibility for integrated Striga management (ISM), 4) determine the variability present among selected sorghum genotypes exhibiting S. hermonthica resistance, and compatibility with the biological control agent using phenotypic and simple sequence repeat (SSR) markers, 5) identify F. oxysporum compatible sorghum parents and hybrids with high combining ability for grain yield, yield components, and Striga resistance for ISM, and 6) undertake farmers‟ participatory assessment, and identify their preferred traits for sorghum genotypes under ISM, simultaneously with the breeders‟ evaluation. A participatory rural appraisal (PRA) research was conducted involving 315 farmers in nine districts of three administrative zones within two provinces in Ethiopia. Sorghum landraces were preferred by >85% of participants rather than previously improved released varieties. The participating farmers listed and prioritized their sorghum production constraints. In the North Shewa and North Wello zones drought was the most important constraint, followed by Striga. In the Metekel zone Striga was the number one constraint followed by a lack of genotypes with high grain quality. Controlled environment experiments were conducted involving greenhouse and laboratory tests in order to evaluate 50 sorghum genotypes for their compatibility with F. oxysporum and for possible deployment of the bio-control agent to control Striga. Striga population was reduced by 92% through the application of F. oxysporum, resulting in yield increment of 144%. Twelve sorghum genotypes were identified as promising parents for breeding and to control Striga through integration of host resistance and F. oxysporum seed treatment. During field and sick plot plot evaluations differential responses to F. oxysporum application among the sorghum genotypes were observed for various attributes including Striga plant height. Most traits showed highly significant (p<0.001) genotype X site interactions. Similarly, the main effects of F.oxysporum application were highly significant (p<0.001) across sites for most of the traits. The genotype and genotype X environment biplot identified 13 genotypes that consistently performed well following Fusarium application. The variability present among 14 selected sorghum genotypes exhibiting S. hermonthica resistance, and compatibility with a biological control agent, Fusarium oxysporum, were determined using phenotypic and 20 polymorphic simple sequence repeat (SSR) markers. Highly significant (p<0.001) differences were detected among genotypes for phenotypic traits. Principal component analysis showed three components that accounted for 73.99% of the total variability exhibited among genotypes. Cluster analysis allocated the genotypes into two major groups, one with a further two subgroups based on morphological traits, showing clear demarcations between the genotypes. The SSR markers revealed high levels of polymorphisms among genotypes, with the mean number of alleles per locus being 6.95 and the mean polymorphic information content being 0.80. The observed genetic diversity was relatively wide, with the allele sizes ranging from 203.6-334 bp. The SSR markers allocated genotypes into two distinct clusters close to the phenotypic markers. Forty sorghum hybrids were developed through a line by tester mating design involving 10 lines selected for their compatibility with F. oxysporum and high agronomic performances and four Striga resistant tester parents. The F1s and their parents were field evaluated with complementary in-vitro tests. Field evaluations were conducted at two locations: Kobo and Shewa Robit in Ethiopia, which are well known for their severe Striga infestation. Significant (p<0.05) general combining ability (GCA) effects were observed among testers and lines at both sites for days to 50% flowering and maturity, plant height, biomass, number of Striga plants and Striga plant height. Furthermore, significant (p<0.05) specific combining ability (SCA) effects were detected for days to 50% flowering, biomass, grain yield and number of Striga plants. From the complementary in-vitro experiment, highly significant variation (p<0.01) was exhibited due to line x tester interaction for maximum Striga germination distance. The study identified paternal parents with high GCA effects including SRN-39 and Birhan and maternals 235761, 2384443, IC9830, 235466, 237289,235763, and 235929 to be useful for breeding for ISM in sorghum. At Kobo, cross 235763 x N-13 and Shewa Robit IC9830 x SRN-39 had significantly negative SCA effects for the numbers of Striga plants. Progenies of these crosses will be selected in the Striga resistance breeding program. In the participatory sorghum genotypes assessment, farmers were invited to assess and select the genotypes based on their preferences at maturity and harvesting. The standard agronomic traits and Striga parameters relevant for breeding were collected by the breeders. Earliness, Striga resistance, high yield and high grain quality and threshability were the most important farmers‟-preferred traits for sorghum genotypes. Comparative analyses between farmers‟ and breeders‟ evaluations revealed highly significant correlations (p<0.01) except between Striga resistance and Striga damage and pest resistance and insect damage. Repeatability of scoring genotypes among farmers was consistent (>0.80) for all traits except Striga and pest resistance. The prioritized traits through farmers‟ participation are important for further breeding program. Overall, the study established farmers‟ preferred traits, the effectiveness of ISM to boost sorghum productivity, and identified useful parents and crosses for effective sorghum breeding to control Striga in Ethiopia. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2013.