The objectives of our study were to determine the potential of 1H MRS in detecting (1) early colonic inflammation, (2) effects of various fatty acids on normal colon and (3) their effects on IBD. Sprague dawley rat fed with 2% carrageenan was used as a model of IBD. Flaxseed oil served as ω-3, corn oil as ω-6 and beef tallow as saturated fatty acid sources. Control group animals were fed 5% corn oil, whereas, those in high-fat diet groups received an additional 7% of the respective fatty acids. After 2 weeks, 1H MRS and histology were conducted on excised colonic mucosa. Statistical classification strategy (SCS) used for analyzing 1H MRS data achieved an accuracy of 82 % in stage 1, 90-100% in stage 2 and 96-100% in stage 3. This implies that 1H MRS is a sensitive tool to diagnose early IBD and the effects of dietary fat on IBD.

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This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.

This thesis is a study of the morphology and sediment transport dynamics of mountain streams in southeast Australia. Mountain streams represent important geomorphological and ecological systems in Australia which have hitherto been poorly studied. The variability of mountain stream reach morphology was investigated at the regional scale using topographical surveys and sediment sampling techniques. Study sites were stratified by slope and local lithology. Eight channel-morphologies including Bedrock, Cascade, Step-pool, Planebed, Pool-Riffle, Cascade-pool, Riffle-step and Infilled, were identified using an objective statistical approach. Overall, channel types were found to correspond to existing reach-scale mountain stream templates. Five morphologies were associated with a specific lithology type which controlled the size and shape of grains supplied to the channels. Differences in coarse sediment transport processes between morphologies were investigated using stream monitoring techniques and Optically Stimulated Luminescence (OSL) dating. Monitoring results from a 3 year period indicated that channel beds are resistant to entrainment with shear stress thresholds for bedload transport ranging between 64 to 74 N/m2. Transport of reach median grain sizes requires floods that exceed bankfull discharge. Existing competence equations were found to over-predict the hydraulic driving force and consequently, a modified entrainment model was used to account for the regional channel characteristics. OSL dating was investigated as a tool to provide data on long-term sediment transport processes. Minimum age model results from the OSL dates show overall agreement with a selected entrainment model, and indicate differences in sediment transport dynamics between some reach morphology types. A regime model was used to quantify the physical domains of different channel morphologies. Limitations of the model were overcome by modifying the sediment supply surrogate to better reflect the dominant transported bedload size. Morphology types were delineated according to different sediment transport capacity-sediment supply domains. The distribution of channel morphology types within a series of catchments in southeast Australia was modelled within a GIS platform using the diagnostics of reach morphology derived from this study. The model provides a conceptual framework to evaluate the potential link between channel form, potential habitat diversity and aquatic biodiversity within the channel network in mountain streams.