Plastic never fully disappears, but instead breaks into smaller pieces referred to as microplastics (< 5 mm length). Microplastics are common worldwide, and more studies are needed to understand the accumulation and diversity of microplastics found in various environments. In this study, six locations were sampled for one year in the Guana River Estuary, a partially impounded system with heavily urbanized headwaters. This study was conducted in conjunction with the Guana Tolomato Matanzas National Estuarine Research Reserve (GTM NERR) and the Florida Fish and Wildlife Conservation Commission (FWC) at their water sampling stations. The objectives of this study were to investigate: 1) distribution patterns across sample sites over time, 2) the color, size, and shape of microplastics found, and 3) polymer composition. Water samples were collected from surface waters in 1-L bottles, with five replicates at each site. Sampling occurred once a month, at the beginning of each month from August 2020-August 2021. Samples were analyzed for abundance and characteristics of microplastics using a dissecting microscope and the polymer composition was determined using Fourier-transform infrared spectroscopy. No pattern was found in the distribution of microplastics from north to south or over time. Variations in plastic color, size, and polymer composition suggests that there are multiple sources of pollution into the Guana River Estuary.

The Amazon River drainage basin is known as the most biodiverse region in the world. Regarding freshwater fish, this region contains around 15% of the world's fish richness. The fish family Serrasalmidae have a variety of feeding preferences including Pacus (herbivores) and Piranhas (carnivores). Fruit eating fish species are evolutionarily the oldest species in the family and have a mutualistic interaction with flooded forests. Considering the diversity of feeding habits of the Serrasalmidae family, it represents an excellent model to study ecological questions related to factors that influence the spatial distribution of species and factors that contribute to the maintenance of biodiversity. I first analyzed how differences in dietary preferences influence the spatial distribution and habitat associations of species at the landscape scale using diet data and three proxies of habitat association derived from satellite products. Using Phylogenetic Generalized Least Squares models I evaluated the relationship between habitat association and feeding guilds. Differences in resource distribution (assessed through feeding guilds) can influence habitat associations. Considering the hydrological variability (i.e., floodplain extent) and landscape heterogeneity that characterize floodplains, the patterns of habitat association vary with the spatial scale considered. Second, I identified factors that aid in sustaining aquatic biodiversity in floodplain forests of the Amazon River basin, focusing on frugivorous fish. I used descriptors of the floodplain ecosystem- and landscape-level variables to assess their contribution to the maintenance of fish species richness. Using Generalized Linear Models (GLM) with negative binomial distribution I found that greater plant richness could offer a greater variety of food resources for frugivorous fishes and that a more extensive floodplain area provides larger forested habitat for fishes that depend on forest-derived food resources, as such subbasins with these characteristics support a greater frugivorous fish species richness. This work provides valuable information on species habitat associations by fish as well as food resource dynamics, floodplain dependence, and advances our understanding of the intricate relationship between forests and fish at a basin scale. This information is critical for assessing the impact of anthropogenic activities on freshwater ecosystems and can be used to inform conservation strategies in the tropics.

Freshwater is a resource under threat due to anthropogenic actions. Stream restoration is a common method for mitigating disturbance. Inconsistent methodologies used for evaluating restorations have drawn criticism. Limited use of baseline data for guiding stream restoration activities is of particular concern. This study was developed to elucidate metrics that differentiate reference and disturbed sites in Upper Coastal Plain streams. This information could improve resource use and successes of restorations. Structural and functional variables were examined in 10 reference and 10 streams that meet the traditional definition of disturbance and would be restoration priorities. Disturbed streams were classified into two regimes, temporal, based on time since disturbance, and categorical, based on disturbance cause. Some metrics of geomorphology, water chemistry and macroinvertebrates differentiated reference from disturbed regimes and while other metrics separated streams within disturbance regimes. Surprisingly, leaf decay rate was not an effective metric for determining disturbance. However, macroinvertebrate leaf pack colonizers were found to be useful for differentiating reference sites and disturbance regimes. Of the 10 disturbed streams this study examined, my data suggests that only three are in immediate need of restoration. This study emphasizes the importance of baseline data and its potential benefits for guiding stream restoration.

Climate change, upwelling events, and local oceanographic events influence nutrient availability to primary producers in the ocean, which in turn affects the ratio of lighter to heavier isotopes, δ15N and δ13C, found in the primary producers of the ocean. When these primary producers die, they create sinking particulate organic matter (POMsink) which is taken up by the calcite and proteinaceous gorgonin rich coral Primnoa pacifica and integrated into their alternating concentric growth bands. Within this study, Primnoa pacifica from Glacier Bay Basin in Alaska is used as an environmental proxy to examine the δ15N and δ13C patterns and variations in the ocean and atmosphere over time. We examined the variations between each sample and compared the information to previously recorded data. δ15N and δ13C of four coral samples were compared using distance as a proxy for time. The approximate calculated ages of GB1 and GB2 were 28.2 and 40.6 years respectively. The δ13C results for this study were inconclusive because inorganic carbon from the calcite layer of the skeleton skewed the results. δ15N results showed much variation between samples.

Despite dramatic morphological differences between animals from different taxa, several important features in organization and sensory system processing are similar across animals. Because of this similarity, a number of different organisms including mammals, insects, and decapod crustaceans serve as valuable model systems for understanding general principles of environmental effects. This research examines intrinsic and extrinsic factors by behaviorally and physiologically means to identify the impact of environmental conditions on two distinct crayfish species- Procambarus clarkii (surface) and Orconectes australis packardi (cave). The research identified behavioral and physiological responses in these two morphological and genetically distinct species. The studies also examined multiple levels of complexity including social behavior, an autonomic response, chemosensory capabilities and neuronal communication, identified comparative similarities/differences, addressed learning and environmental influences on learning and examined behavioral and cellular responses to high levels of carbon dioxide. I found environmental factors directly influence crayfish behavior of social interactions. Interactions were more aggressive, more intense and more likely to end with a physical confrontation when they took place 'in water' than 'out of water'. The modified social interaction resulted in a altered fighting strategy. A study on motor task learning was undertaken which showed similar learning trends among these crayfish species despite their reliance on different sensory modalities. I also demonstrated learning was dependent on perceived stress by the organism. Previously trained crayfish inhibited from completing a task showed significant increase in an autonomic stress response. Studies on the behavioral and physiological responses to CO2 revealed that high [CO2] is a repellent in a concentration dependent manner. The autonomic responses in heart rate and an escape tailflip reflex shows complete cessation with high [CO2]. A mechanistic effect of CO2 is by blocking glutamate receptors at the neuromuscular junction and through inhibition of the motor nerve within the CNS.

The rocky intertidal zone, experiencing fully marine and fully terrestrial conditions, has become increasingly investigated as a model ecosystem for studying the future implications of climate change. The barnacle, Balanus glandula, a common rocky intertidal inhabitant, plays an important role as a key prey item for many organisms. Low tide can be particularly challenging for barnacles as they are marine organisms subjected to the abiotic conditions of a terrestrial environment. The most stressful of these are increased temperature and decreased oxygen availability. This study aimed to investigate how low tide impacts the energy budget, specifically the digestion, of B. glandula. Barnacles are unable to feed at low tide however, if they were able to digest at low tide, they could maximize their energy intake by emptying their stomach to prepare to feed at the next high tide. However, digestion is a metabolically costly activity, which could make it less energetically favorable to digest when there’s less oxygen available. To test for an effect of low tide on digestion, barnacles were fed, and the time to first fecal production measured as a ‘baseline’. This was repeated, but barnacles were exposed to either a 16ºC or 35 ºC low tide immediately after being fed. The change in digestion time was calculated by comparing these two times for each barnacle. It was found that regardless of temperature, barnacles delayed their digestion by about 50-60 minutes after exposure to a one hour low tide. To determine the energetic cost of digestion, the rate of oxygen consumption was compared between starved and digesting barnacles. I was unable to detect any evidence of elevated metabolic activity during digestion. Additional testing is needed to confirm these results as the barnacles may have not fed during the trial, thus had no food to digest. While it appears that increasing temperatures associated with climate change will have little impact on the digestion of barnacles at low tide, if climate change alters the duration of low tide, there could be an energetic impact to barnacles due to the slowing of their metabolism as indicated by the delay in their digestion.

During the 19th and 20th centuries, alterations to the Pecos River in New Mexico and Texas, USA due to anthropogenic activities, including damning and river channelization, vast water extraction for irrigation, as well as pollution of associated habitats, have greatly impacted the fish fauna within the drainage. One of the endemic fish species, the Pecos pupfish (Cyprinodon pecosensis), might be the most affected. Historically abundant and widespread large populations have been disrupted and became a series of small isolated subpopulations that persist at a few highly fragmented habitats restricted to a small area in southern New Mexico. The connectivity among these habitats is extremely low, and can potentially prevent any gene flow among subpopulations, which might eventually result in morphological divergence among subpopulations in face of different ecological conditions. Here I utilized landmark-based Geometric Morphometrics to evaluate body shape variation of the Pecos pupfish at 26 different localities categorized into four general habitat types that each differ greatly in ecological properties. Results from this study suggest that, despite significant sexual dimorphism, body shape morphology of Pecos pupfish varied in response to spatial heterogeneity and it was most intensely influenced by specific localities within habitat types. There were overlaps of the convex hull regions of morphospace among the four habitat types, implying that ecomorphological dynamics of the Pecos pupfish were rather site-specific. Moreover, temporal variation of body morphology was statistically significant but not comparable to body shape variation among different localities. The empirical data collected from this study provides preliminary evidence for phenotypic diversity of Pecos pupfish in varied ecological conditions, which has important implications for the future conservation management of Pecos pupfish diversity and viability. Such implications could be extended to other endemic desert fishes in disrupted habitats.

The priming effect (PE), characterized as the enhanced microbial processing of bio-recalcitrant organic matter with the addition of labile substrates, has been hypothesized to moderate carbon (C) cycling in aquatic systems. In this study, aquatic PEs were evaluated through bacterial respiration and dissolved organic C consumption in incubations of water collected from three locations along the York River estuary. Incubations from White’s Landing on the Pamunkey River, a tidal freshwater tributary of the York, and from Croaker Landing in the middle of the estuary, displayed positive PEs when amended with labile C. In contrast, amended incubations from Gloucester Point, near the mouth of the estuary, displayed negative PEs, or reduced relative C metabolism, based on our calculations, This study provides empirical evidence for the occurrence of aquatic PEs and serves to elucidate how they may enhance or retard the processing and mineralization of organic C during transport to the ocean.

Landscapes are comprised of multiple ecosystems shaped by disturbances varying in severity and source. Moderate disturbance from weather, pathogens, insects, and age-related senescence, in contrast to severe disturbances that fell trees, may increase standing woody debris and alter the contribution of coarse woody debris (CWD) to total ecosystem respiration (RE). However, woody debris dynamics are rarely examined following moderate disturbances that substantially increase standing dead wood stocks. We used an experimental manipulation of moderate disturbance in an upper Great Lakes forest to: 1) examine decadal changes in CWD stocks through a moderate disturbance; 2) quantify in situ CWD respiration during different stages of decay for downed and standing woody debris and; 3) estimate the annual contribution of CWD respiration to the ecosystem C balance through comparison with RE and net ecosystem production (NEP). We found that the standing dead wood mass of 24.5 Mg C ha-1 was an order of magnitude greater than downed woody debris stocks and a large source of ecosystem C flux six years following disturbance. Instantaneous in situ respiration rates from standing and downed woody debris in the earliest stages of decay were not significantly different from one another. Independently derived estimates of ecosystem CWD respiration of 1.1to 2.1 Mg C ha-1 yr-1 six years following disturbance were comparable in magnitude to NEP and 12.5 % to 23.8 % of RE, representing a substantial increase relative to pre-disturbance levels. Ecosystem respiration and NEP were stable following moderate disturbance even though ecosystem CWD respiration increased substantially, suggesting a reduction in the respiratory C contribution from other sources. We conclude that CWD is an essential component of the ecosystem C balance following a moderate forest disturbance.

A 12-month study (January to December 2015) focused on the effects of tidal forcing on nutrient fluxes in the tidal, freshwater segment of the James River Estuary (JRE). Discrete sampling of nutrient chemistry and continuous monitoring of tidal discharge were used to determine the volume and timing of the tides, and differences in nutrient concentrations between incoming and outgoing tides. The goal of this study was to improve understanding of tidal influence on nutrient fluxes and their role in nutrient transport to the lower estuary. Results suggested that differences in nutrient concentrations between incoming and outgoing tides were small throughout the year. This finding suggests that nutrient fluxes at the study site, near the tidal fresh-oligohaline boundary of the James, are largely determined by tidal volume owing to weak concentrations gradients. Changes in water quality during seaward and landward tidal excursions into deeper versus shallower segments were analyzed to infer biogeochemical processes. Differences in oxygen production and nitrate utilization suggest greater autotrophy during landward excursions, consistent with more favorable light conditions. This work was conducted as a collaborative effort between Virginia Commonwealth University, the USGS, Randolph-Macon College, and Washington and Lee University participating in the “Mountains to the Sea” project.