The relationship between extractable invertase activities and sucrose accumulation in the sugarcane (Saccharum spp. hybrids) culm and in vivo invertase mediated sucrose hydrolysis was investigated to determine the significance of invertases in sucrose utilisation and turnover. In vitro activities were determined by assaying the soluble acid invertase (SAI), cell wall bound acid invertase (CWA) and neutral invertase (NI) from internodes three to ten in mature sugarcane plants of cultivar NCo376. Extractable activities were verified by immunoblotting. In vivo invertase mediated sucrose hydrolysis was investigated in tissue discs prepared from mature culm tissue of the same cultivar. Sugarcane NI had a higher specific activity than SAI (apoplastic and vacuolar) in the sucrose accumulating region of the sugarcane culm. CWA was also present in significant quantities in both immature and mature tissue. Sugarcane NI was partially purified from mature sugarcane culm tissue to remove any potential competing activity. The enzyme is non-glycosylated and exhibits catalytic activity as a monomer, dimer and tetramer. Most of the activity elutes as a monomer of native Mr ca 60 kDa. The enzyme displays typical hyperbolic saturation kinetics for sucrose hydrolysis. It has a Km of 9.8 mM for sucrose and a pH optimum of 7.2. An Arrhenius plot shows the energy of activation of the enzyme for sucrose to be 62.5 kJ.mol-1 below 30°C and -11.6 kJ.mol-1 above 30°C. Sugarcane NI is inhibited by its products, with fructose being a more effective inhibitor than glucose. Sugarcane NI is significantly inhibited by HgCI2, AgNO-3, ZnCI2, CuSO4 and CoCI2 but not by CaCI2, MgCI2 or MnCI2. Sugarcane NI showed no significant hydrolysis of cellobiose or trehalose. When radiolabelled fructose was fed to sugarcane internodal tissue, label appeared in glucose which demonstrates that invertase mediated hydrolysis of sucrose occurs. A combination of continuous feeding and pulse chase experiments was used to investigate the in vivo contribution of the invertases and the compartmentation of sugars. Sucrose is synthesised at a rate greater than the rate of breakdown at all stages of maturity in sugarcane culm tissue. The turnover time of the total cytosolic label pool is longer for internode three than internode six. A higher vacuolar:cytosolic sugar molar ratio than previously assumed is indicated. Developmentally, the greatest change in carbon allocation occurs from internodes three to six. The main competing pools are the insoluble and neutral fractions. As the tissue matures, less carbon is allocated to the insoluble and more to the neutral fraction. The neutral fraction consists mainly of sucrose, glucose and fructose. The compartmented nature of sugarcane storage parenchyma carbohydrate metabolism results in a system that is complex and difficult to investigate. A computer based metabolic flux model was developed to aid in the interpretation of timecourse labelling studies. A significant obstacle was the global optimization of the model, while maintaining physiologically meaningful flux parameters. Once the vacuolar:cytosolic molar ratio was increased, the model was able to describe the internode three and six labelling profiles. The model results were in agreement with experimental observation. An increase in the rate of sucrose accumulation was observed with tissue maturation. Only the internode three glucokinase activity was greater than the experimentally determined limit. The rate was however physiologically feasible and may reflect the underestimation of the in vivo rate. SAI and NI contributed to sucrose hydrolysis in internode three but not in internode six. The rates in internode six were set to fixed low values to enable the model to fit the experimental data. This does not however preclude low levels of in vivo SAI and NI activity, which would prove significant over a longer time period. The flow of label through the individual pools, which comprise the experimentally measured composite pools could be observed. This provides insight into the sucrose moiety label ratio, SPS:SuSy sucrose synthesis ratio, and the rate of 14CO2 release. The model provides a framework for the investigation and interpretation of timecourse labelling studies of sugarcane storage parenchyma. / Thesis (Ph.D.)-University of Natal, Durban, 2000.

There is a great deal of work currently being done in the field of desiccation tolerance. Generally workers studying desiccation-tolerant plant tissues have concentrated on the mechanisms of desiccation tolerance without concomitant studies on why most plants cannot survive desiccation. The present study considers both a desiccation-tolerant plant as well as a range of desiccation-sensitive plants. The work incorporates physiological, biophysical, biochemical and ultrastructural studies in an attempt to get a holistic picture of vegetative material as it dries and then rehydrates. The plant species used in this study are: Craterostigma nanum, a so-called resurrection plant; Garcinia livingstonei, a drought-tolerant small tree; Isoglossa woodii, an understorey shrub which shows a remarkable ability to recover from wilting; Pisum sativum seedlings, which have a very high water content at full turgor; and finally, Adiantum raddianum, the maiden hair fern, which wilts very quickly and does not recover from wilting. The desiccation-tolerant plant, C. nanum, had an unusual pressure-volume (PV) curve which indicated that while large volume changes were taking place there was little concomitant change in pressure or water potential. The unusual nature of this PV curve made it difficult to assess the relative water content (RWC) at which turgor was lost. The desiccation-sensitive plants exhibited standard curvi-linear PV curves. The amount of nonfreezable water in the five species was studied and found to show no correlation with the ability to withstand dehydration or with the lethal water content. There were no differences in the melting enthalpy of tissue water between the tolerant and most of the sensitive plants. Isoglossa woodii had a lower melting enthalpy than the tolerant and the other sensitive species. Survival studies showed that the desiccation-sensitive plants all had similar lethal RWCs. The tolerant plant survived dehydration to as low as 1% RWC, recovering on rehydration within 24 hours. Membrane leakage studies showed that the sensitive plants all exhibited membrane damage at different absolute water contents, but very similar RWCs and water potentials. The increase in leakage corresponded to the lethal RWC for all the sensitive species. The desiccation-tolerant plant recovered from dehydration to very low water contents and did not show an increase in membrane leakage if prior rehydration had taken place. Without prior rehydration this tolerant plant exhibited an increase in leakage at similar RWCs and water potentials to that of the sensitive species. There did not appear to be much difference in the RWC at which damage to membranes occurred whether the material was dried rapidly or slowly. Respiration and chlorophyll fluorescence were studied to determine what effect drying and rehydration have on the electron transport· processes of the leaf. The chlorophyll fluorescence studies gave an indication of damage to the photosynthetic apparatus. Both qualitative changes as well as quantitative changes in fluorescence parameters were assessed. Characteristics like quantum efficiency (Fv/Fm)remained fairly constant for a wide range of RWCs until a critical RWC was reached where there was a sharp decline in Fv/Fm. Upon rehydration, C. nanum recovered to pre-stress levels, I. woodii showed no recovery and no further damage on rehydration, whilst the other species exhibited even more damage on rehydration than they had on dehydration. Respiration remained fairly constant or increased slightly during drying until a critical RWC was reached at which it suddenly declined. The RWC at which this decline occurred ranged from 15% and 20% in P. sativum and C. nanum respectively, to 50% for G. livingstonei. On rehydration respiration exceeded the levels measured in dehydrated material for the sensitive species. Unsuccessful attempts were made to fix material anhydrously for ultrastructural studies so standard fIxation was used. The ultrastructural studies revealed that changes had occurred in the ultrastructure of leaves of the sensitive species dried to 30% RWC particularly in A. raddianum and P. sativum. Drying to 5% RWC revealed extensive ultrastructural degradation which was worsened on rehydration in the sensitive species. The tolerant species showed ultrastructural changes on drying but these were not as severe as occurred in the sensitive species. The cell walls of the tolerant species folded in on drying. This folding was possibly responsible for the unusual PV curves found in this species. At 5% RWC the cells were closely packed and very irregular in shape. The cell contents were clearly resolved and evenly spread throughout the cell. The large central vacuole appeared to have subdivided into a number of smaller vacuoles. On rehydration the cells regained their shape and the cell contents had moved towards the periphery as the large central vacuole was reformed. Beading of membranes, which was common in the sensitive species, was not found in the tolerant species suggesting that membrane damage was not as severe in the tolerant species. Western Blot analysis of the proteins present during drying was performed to determine whether a class of desiccation-induced proteins, called dehydrins, were present. These proteins have been suggested to play a protective role in desiccation-tolerant tissue. It was found that C. nanum did, in fact, possess dehydrins, but so did P. sativum. The other three sensitive species did not show any appreciable levels of dehydrin proteins. The presence of dehydrins alone is, therefore, not sufficient to confer desiccation tolerance. While physiologically the damage occurring in the sensitive plants was similar to that of the tolerant plant, at an ultrastructural level the damage appeared less in the tolerant plant. On rehydration from low RWCs damage appeared to become exacerbated in the sensitive plants. This was in contrast to the tolerant plant where damage was apparently repaired. There appears, therefore, to be a combination of protection and repair mechanisms responsible for the ability of C. nanum to tolerate desiccation. The lethal RWC of the sensitive species was higher than that at which protective mechanisms, such as water replacement, might come into play. So it is not just the possible ability to replace tightly bound water that set the tolerant plant aside. It must also have mechanisms to tolerate damage at the higher RWCs which were damaging and lethal to the sensitive plants. The lethal damage to sensitive species appeared to be related to a critical volume, thus it is concluded that the tolerant plant had the ability to tolerate or avoid this mechanical damage during drying as well as the ability to remain viable in the dry state. It is hypothesised that the ability of the walls to fold in and the unusual nature of the PV curve may provide some answers to the enigma of desiccation tolerance. / Thesis (Ph.D.)-University of Natal, 1995.

Achieving long-term storage of germplasm is critical for the conservation of plant biodiversity. Seed storage practices require that degradative reactions causing ageing be limited. By reducing the water content, cytoplasmic viscosity is increased to levels that minimise deteriorative reactions. Reducing the storage temperature additionally increases the storage lifespan by further reducing the rate at which such deleterious processes occur. Two broad categories of seeds can be distinguished based on their storage behaviour. Orthodox seeds are desiccation-tolerant; generally shed in the dry state and are metabolically quiescent. Such seeds are usually stored at low water contents (e.g. 5%), and their high cytoplasmic viscosity prevents freezing damage during cooling to subzero temperatures. On the other hand, desiccation-sensitive (recalcitrant) seeds do not undergo a maturation-drying phase, they are metabolically active at shedding, and sensitive to extreme or prolonged drying. Accordingly, recalcitrant seeds cannot be stored under conventional conditions because they do not survive drying to low water contents and are damaged by sub-zero temperatures, even when dried to the lowest water content tolerated. Therefore, procedures that facilitate harmless drying and cooling to low temperatures are required to achieve long-term storage of recalcitrant germplasm. Recalcitrant seeds that are dried rapidly can attain relatively lower water contents without injury. However, these seeds are usually large and this limits the drying rates that can be achieved even under favourable conditions. Isolating embryonic axes from the rest of the seed facilitates faster drying, and a consequent reduction in the water content at which damage occurs. In axes of many species, the level of drying attained before lethal desiccation damage occurs is sufficient to limit freeZing damage during cryogenic exposure and facilitate survival in vitro. However, many others are damaged when dried to water contents that preclude freezing, and also are killed if cooled to sub-zero temperatures at higher water contents. In such instances, the window of permissible water contents leading to survival may be small or nonexistent. A basic premise explored in this thesis is that by restricting the growth of intracellular ice crystals using increasingly rapid cooling rates, the range of permissible water contents can be widened, facilitating survival of axes at higher water contents. An overview of the problems associated with the long-term storage of recalcitrant germplasm, and the rationale behind such rapid cooling approach are presented in Chapter 1 of the present thesis. Subsequent chapters report investigations on the effects of variables required to dry and cryopreserve embryonic axes with minimum damage, in keeping with this approach. Collectively, those studies aimed at establishing a robust cryopreservation procedure for the conservation of recalcitrant germplasm with broad applicability across species. The approach presently adopted entailed manipulating the water content of excised axes using rapid drying to discrete water content ranges, and also using different methods to cool axes to cryogenic temperatures at various rates. The calorimetric properties of water in axes were investigated for Camellia sinensis (L.) O. Kuntze using differential scanning calorimetry (DSC). For all species, the effect of any drying or cooling treatment tested was determined by assessing the survival of axes in vitro, which provided the most reliable indicator of cellular damage. Additionally, the effects of different treatments upon the structural and functional integrity of axes were assessed using light and electron microscopy as well as measurement of electrolyte leakage. The studies undertaken are presented in a similar sequence to that in which they took place during the course of the experimental phase of this work. These are summarised below. Partial drying plays a pivotal role in the approach developed, and microscopy has contributed towards increasing present understanding of desiccation damage. Microscopy was used to determine the effects of drying rate upon the ultrastructure of recalcitrant axes. It was necessary to find reliable protocols to prepare specimens for light and electron microscopy that did not alter the architecture of the cells in the dry state. Freeze-substitution and conventional aqueous fixation were compared in Chapter 2 using variously dried material from three species. The results obtained revealed that an unacceptably high extent of artefactual rehydration occurs during aqueous fixation, and highlight the need for anhydrous processing of dehydrated samples. Significantly, that study also revealed that many cellular events commonly associated with desiccation damage (e.g. withdrawal, tearing and/or vesiculation of the plasmalemma) are not seen in freeze-substituted preparations, and are likely artefacts of aqueous fixation. Freeze-substitution was used subsequently (Chapter 3) to assess the effects of slow drying (2 - 3 days) or rapid drying (min) upon the survival of embryonic axes of jackfruit (Artocarpus heterophyllus Lamk.) Results confirmed the beneficial effects of rapid drying, and also provided insights into ultrastructural changes and probable causes underlying cellular damage that occur during a drying/rehydration cycle. Efforts subsequently focused on determining the effect of cooling rate upon survival of recalcitrant axes at various water contents. The study on embryonic axes of recalcitrant camellia sinensis (tea; Chapter 4) tested the hypothesis that rapid cooling facilitates survival of axes at higher water content by restricting the growth of ice crystals to within harmless dimensions. The presence of sharp peaks in DSC melting thermograms was indicative of decreased survival in vitro. These peaks were attributed to the melting of ice crystals sufficiently large to be detected by DSC as well as to cause lethal damage to axes. Increasing the cooling rate from 10°C min-1 to that attained by forcibly plunging naked axes into sub-cooled nitrogen increased the upper limit of water content facilitating survival in vitro from c. 0.4 to 1.1 - 1.6 g H20 g-1 (dry mass [dmb]). Subsequent studies tested whether a similar trend occurred in other recalcitrant species cooled under similar conditions. In order to investigate further the relationship between water content, cooling rate and survival it was necessary to achieve cooling rates reproducibly, and to quantify these reliably. The plunging device required to achieve rapid cooling, and instruments required to measure the cooling rates attained, are described in Chapter 5. That study investigated the effects of cryogen type, depth of plunge and plunging velocity on the cooling rates measured by thermocouples either bare or within tissues of similar size and water content as encountered in cryopreservation experiments. This plunger was used in subsequent studies to achieve the fastest cooling conditions tested. Favourable cooling conditions were selected, and the efficacy of this procedure to cryopreserve relatively large axes was tested (Chapter 6) using embryonic axes of horse chestnut (Aesculus hippocastanum L.) Axes at water contents above c. 0.75 g g-1 could not be cooled faster than c. 60°C S-1, but cooling rates of axes below this water content increased markedly with isopentane, and to a lesser extent with subcooled nitrogen. Axes were killed when cooled at water contents above 1.0 g g-1 but survived fully (albeit abnormally) when cooled in isopentane between 1.0 and 0.75 g g-1. Complete survival and increasingly normal development was attained at water contents below 0.75 g g-1, especially if isopentane was used. The study on horse chestnut axes emphasised that water content and cooling rate are co-dependent during non-equilibrium cooling. Accordingly, that study could not determine whether survival at lower water contents increased because of the corresponding increase in cooling rates measured, or because of the higher cytoplasmic viscosity that resulted from drying. That uncertainty was addressed by the study discussed in Chapter 7, using axes of the trifoliate orange (Poncirus trifoliata [L.] RAF.) That study investigated the effect of cytoplasmic viscosity upon survival of axes cooled and warmed at different rates. Survival and normal development was high at lower water contents, and seemingly independent of cooling rate at about 0.26 g g-1. At higher water contents the range of cooling rates facilitating survival became narrower and displaced towards higher cooling rates. This study revealed two conspicuous inconsistencies that questioned the beneficial effect of rapid cooling. Firstly, the fastest cooling rates did not necessarily facilitate the highest survival. Secondly, survival of fully hydrated axes was higher when cooled under conditions that encouraged - rather than restricted - the growth of intracellular ice crystals. These inconsistencies were explored further using embryonic axes of silver maple (Acer saccharinum L.). Freeze-fracture replicas and freeze-substitution techniques provided valuable insights into the way in which ice crystals were distributed in cells cooled using different methods at rates ranging between 3.3 and 97°C S-1. Extensive intracellular freezing was common to all treatments. Unexpectedly, fully hydrated axes not only survived cryogenic exposure, but many axes developed normally when cooled using the relatively slower methods (77 and 3.3°C S-1) if warming was rapid. The most conspicuous ultrastructural difference between plunge cooling and the relatively slower methods was the exclusion of ice from many intracellular compartments in the latter. It is possible that even the fastest warming cannot prevent serious cellular damage if ice crystals form within such 'critical' compartments. It is proposed that the intracellular location of ice is a stronger determinant of survival that the size attained by ice crystals. The study of A. saccharinum also investigated the recovery of axes cooled fully hydrated either rapidly (97°C S-1) or slowly (3.3°C S-1). This facet of the study showed that cell lysis became apparent immediately after warming only where damage was most extensive. In other cells damage became apparent only after 2.5 to 6 h had elapsed, thus cautioning against inferring survival from the ultrastructural appearance of cells immediately after warming. Microscopy enabled cell repair as well as the pattern of growth of cryopreserved tissues to be appraised at the cellular, tissue and organ levels. Similar studies are required to understand further the nature of freezing damage, and how those events affect cell function. The salient trends observed in previous chapters are brought together in Chapter 9. / Thesis (Ph.D.)-University of Natal, Durban, 2002.

Recalcitrant unlike orthodox seeds do not show a sharp border between maturation and germination and remain highly hydrated and desiccation-sensitive at all developmental and post-harvest stages. In contrast with recalcitrant seeds, orthodox types retain viability for predictably long periods in the dry state and hence can be stored under low relative humidity and temperature conditions. Storage of recalcitrant seeds under conditions allowing little to no water loss, at moderate temperatures, allows for short- to medium-term storage but only facilitates viability retention for a matter of a few weeks to months, at best, because the seeds are metabolically active and initiate germination while stored. Cryopreservation, i.e. storage at ultra-low temperatures (usually in liquid nitrogen [LN] at -196°C), is a promising option for the long-term germplasm conservation of recalcitrant-seeded species but their seeds present some unavoidable difficulties in terms of the amenability of their germplasm to cryopreservation. Pre-conditioning treatments can reduce the amount of ‘free’ water available for freezing and may increase the chances of cells or tissues surviving exposure to cryogenic temperatures. Such conditioning may be imposed by physical dehydration or cryoprotection, i.e. exposure to compounds that depress the kinetic freezing point of water and so reduce the likelihood of lethal ice-crystal formation during cooling (i.e. exposure to LN at -196°C or sub-cooled LN at -210°C) and subsequent thawing. Partial dehydration is presently a standard pre-treatment for the cryopreservation of recalcitrant zygotic germplasm and explant cryoprotection has been shown to improve postthaw survival in some recalcitrant-seeded species. However, there is a paucity of information on the physiological and biochemical basis of post-thaw survival or death in recalcitrant seeds, and this is the major focus of the current contribution. Additionally, in light of the lack of understanding on how cryo-related stresses imposed at the embryonic stage are translated or manifested during subsequent seedling growth, this study also investigated the effects of partial dehydration and the combination of partial dehydration and cooling of recalcitrant zygotic embryos on subsequent in and ex vitro seedling vigour. All studies were undertaken on the zygotic embryos of two recalcitrant-seeded members of the Amaryllidaceae, viz. Amaryllis belladonna (L.) and Haemanthus montanus (Baker); both of which are indigenous to South Africa. Studies described in Chapter 2 aimed to interpret the interactive effects of partial dehydration (rapidly to water contents > and <0.4 g g-1), cryoprotection (with sucrose [Suc; nonpenetrative] or glycerol [Gly; penetrative]) and cooling rate (rapid and slow) on subsequent zygotic embryo vigour and viability, using three stress markers: electrolyte leakage (an indicator of membrane integrity); spectrophotometric assessment of tetrazolium chloride-reduction (an indicator of respiratory competence); and rate of protein synthesis (an indicator of biochemical competence). These studies showed that in recalcitrant A. belladonna and H. montanus zygotic embryos, stresses and lesions, metabolic and physical, induced at each stage of the cryopreservation protocol appear to be compounded, thus pre-disposing the tissues to further damage and/or viability loss with the progression of each step. Maximum post-thaw viability retention in both species appeared to be based on the balance between desiccation damage and freezing stress, and the mitigation of both of these via Gly cryoprotection. Post-thaw viabilities in both species were best when Gly cryoprotected + partially dried zygotic embryos were rapidly, as opposed to slowly, cooled. However, the rate at which water could be removed during rapid drying was higher in A. belladonna and this may explain why the optimum water content range for post-thaw survival was <0.40 g g-¹ for A. belladonna and >0.40 g g-¹ for H. montanus. These results suggest that to optimise cryopreservation protocols for recalcitrant zygotic germplasm, attention must be paid to pre-cooling dehydration stress, which appears to be the product of both the ‘intensity’ and ‘duration’ of the stress. Cryoprotection and dehydration increased the chances of post-thaw survival in A. belladonna and H. montanus zygotic embryos. However, transmission electron microscopy studies on the root meristematic cells from the radicals of these embryos (described in Chapter 3) suggest that their practical benefits appear to have been realised only when damage to the sub-cellular matrix was minimised: when (a) pre-conditioning involved the combination of cryoprotection and partial dehydration; (b) the cryoprotectant was penetrating (Gly) as opposed to non-penetrating (Suc); and (c) embryos were rapidly cooled at water contents that minimised both dehydration and freezing damage. The ability of A. belladonna and H. montanus embryos to tolerate the various components of cryopreservation in relation to changes in extracellular superoxide (.O2 -) production and lipid peroxidation (a popular ‘marker’ for oxidative stress) was investigated in studies featured in Chapter 4. Pre-conditioning and freeze-thawing led to an increase in oxidative stress and the accompanying decline in viability suggests that oxidative stress was a major component of cryoinjury in the embryos presently investigated. Post-thaw viability retention in Gly cryoprotected + partially dried embryos was significantly higher than noncryoprotected + partially dried embryos, possibly due to the relatively lower post-drying lipid peroxidation levels and relatively higher post-drying and post-thawing enzymic antioxidant activities in the former. Exposure of certain plant tissues to low levels of oxidative or osmotic stress can improve their tolerance to a wide range of stresses. In contrast, exposure of H. montanus zygotic embryos to low levels of oxidative stress provoked by exogenously applied hydrogen peroxide (H2O2) or exposure of A. belladonna embryos to low levels of osmotic stress provoked by low water potential mannitol and polyethylene glycol solutions (in studies featured in Chapter 5) increased their sensitivity to subsequent dehydration and freeze-thaw stresses. Exposure of Gly cryoprotected and non-cryoprotected amaryllid embryos to such stress acclimation treatments may pre-dispose A. belladonna and H. montanus embryos to greater post-drying and post-thaw total antioxidant and viability loss than untreated embryos. To assess the vigour of seedlings recovered from partially dried H. montanus embryos, seedlings recovered from fresh (F) and partially dried (D) embryos in vitro were hardened-off ex vitro, and subsequently subjected to either 42 days of watering or 42 days of water deficit (in studies described in Chapter 6). In a subsequent study (described in Chapter 7), seedlings recovered from fresh (F), partially dried (D) and cryopreserved (C) A. belladonna embryos were regenerated in vitro, hardened-off ex vitro and then exposed to 12 days of watering (W) or 8 days of water stress (S) followed by 3 days of re-watering. Results of these studies suggest that the metabolic and ultrastructural lesions inflicted on A. belladonna and H. montanus zygotic embryos during cryopreservation may compromise the vigour (e.g. development of persistent low leaf water and pressure potentials and reduced photosynthetic rates) and drought tolerance of recovered seedlings, compared with seedlings recovered from fresh embryos. While the adverse effects of freeze-thawing were carried through to the early ex vitro stage, certain adverse effects of partial drying were reversed during ex vitro growth (e.g. the increased relative growth rate of seedlings from partially dried embryos). The reduced vigour and drought tolerance of seedlings recovered from partially dried and cryopreserved embryos in the present work may therefore disappear with an extension in the period afforded to them for hardening-off under green-house conditions, and in the field. The results presented in this thesis reinforce the notion that each successive manipulation involved in the cryopreservation of recalcitrant zygotic germplasm has the potential to inflict damage on tissues and post-thaw survival in such germplasm relies on the minimisation of structural and metabolic damage at each of the procedural steps involved in their cryopreservation. The results also highlight the need to design research programmes aimed not only at developing protocols for cryopreservation of plant genetic resources, but also at elucidating and understanding the fundamental basis of both successes and failures. / Thesis (Ph.D.)-University of KwaZulu-Natal, Westville, 2010.

Disa comprises 163 species, 131 of which occur in South Africa (SA). The genus is distributed across winter- and summer-rainfall areas, but few species transverse both climatic regions. Species are therefore regarded as winter-rainfall or summer-rainfall endemics - yet release their seeds in autumn, irrespective of provenance. Disa contributes 40 % of threatened Orchidaceae in SA, with half of the local species requiring conservation initiatives. In vitro seed germination is a potential conservation tool for producing large numbers of genetically diverse plants in relatively short periods. However, only 11 winter-rainfall Disa species are easily germinated ex situ. Studies were therefore undertaken on summer-rainfall taxa, which are ungerminated in vitro, in an effort to define their germination parameters. This thesis describes mechanisms that control germination in Disa and establishes practical propagation methods for seed culture. Two seed types occur in Disa; i) comparatively large, pale and pyriform seeds in members of the D. uniflora sub-c1ade, which populate streamside habitats under conditions of winter-rainfall maxima, and ii) smaller, variously brown and fusiform seeds in the remainder of the genus. Seed morphometrics distinguished seed types, although embryo dimensions were similar. Testa continuity, which is disrupted in the large seeds, also supported separation. Typically, small seeds are ungerminated in vitro, whilst large seeds germinated readily. Increased seed size did not necessarily impart increased germ inability, as several germinable, small-seeded species exist - being winter-rainfall species Attempts to establish in vitro germinability revealed that increased water availability and charcoal supplementation promoted germination in intractable species. The control of germination was therefore proposed as a trade-off between water availability and the presence of phyto-inhibitors - two features typical of seeds exhibiting water-impermeable dormancy. Three germinability categories were recognized; i) easily germinable species, ii) poorly germinable species through media manipulation, and iii) ungerminated species. Germination of immature seed in the absence of media modification was comparable to mature seed germination under modified conditions, providing evidence of the role of an impermeable seed testa in regulating germination. Testa impermeability in mature, small-seeded species was demonstrated using aqueous EVANS' blue dye and was linked to i) testa integrity and ii) increased levels of leachable phenolics (LPC) - which are hydrophobic and phytotoxic. In addition, this research revealed an impervious and elaborate embryo carapace in small seeds. Large-seeded species were highly permeable at dehiscence, with perforated testae and negligible LPC. Germinability was ultimately defined by a significant regression with LPC. Phenolic deposition increased exponentially with increasing seed maturity and reflected decreased permeability and the development of testa colouration. The testa precludes the use of viability stains such as nc and FDA, unless rendered permeable through scarification. This was achieved using NaOCI. Viability and germinability percentages did not correlate well for the small-seeded Disa species, indicating that i) the methods used to break dormancy are inadequate, ii) additional factors may be acting in concert with the testa to regulate germination and iii) that the determination of mature Disa seed viability is ineffective. As an alternative, the germination potential of immature seed was estimated as the ratio between the proportion of embryos stained with TTC and the proportion of seeds permeable to EVANS' blue. Attempts to relieve water-impermeable dormancy in Disa resulted in the formulation of a dual-phase protocol - with the specific aim of increasing water availability to the embryo. Dual-phase cultures comprised a solid, charcoal-rich medium overlaid with a reduced strength, liquid medium fraction of the same type. The solid fraction negated the influence of leached phenols and allowed protocorms to establish polarity, whilst the fluid fraction increased water availability. The dual-phase protocol allowed germination of nine summer-rainfall Disa species, usually in percentages that approximated their estimated germination potential. For the remaining species, germination is controlled by more complex factors. Large seeds are atypical in containing starch, the hydrolysis of which facilitated their rapid, autonomous germination. Small-seeded Disa species stored lipids and proteins and germinable species accumulated starch post-germination. The embryo protoplasts of all species contained appreciable amounts of soluble sugars, irrespective of germinability. However, decreased sucrose and increased fructose correlated significantly with decreased seed germinability. This study provides evidence of the nutritional value of mycotrophy, with endophytes liberating soluble carbohydrate and non-carbohydrate compounds upon lysis. However, few species were germinated symbiotically, suggesting that endophytes isolated from adult roots do not necessarily support germination in the same species. Similar endophytic fungi occur in Australian and Holarctic orchids. / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 2003.

The family Proteaceae is distributed predominantly in the south-western Cape Province of South Africa and south-western and south-eastern Australia, areas which fall within the climate term mediterranean ecosystems. A major characteristic of these areas is the low level of total nutrients in the soil, particularly nitrogen and phosphorus. In their natural habitat, therefore, Proteaceae occur on well-drained and highly leached soils of low nutrient status. Efficient nutrient cycling processes, combined with morphological adaptations designed to facilitate maximum absorption of available nutrients (for example, proteoid roots in the Proteaceae), conserve the limited nutrients available, allowing for the continued growth of these shrubs under conditions of low nutrient availability. In recent years, flowers of certain species of Proteaceae have become popular as cut-flowers. As a result, many species of Proteaceae are currently cultivated worldwide, under conditions that match as closely as possible those found in mediterranean ecosystems. Traditionally, the shrubs are cultivated on nutrient poor soils and of concern is the loss of nutrients through the removal of flowers for commercial sale. Therefore, the aim of the present study was to evaluate growth and mineral cycling in the proteaceaous shrub, Protea neriifolia R.Br., cultivated in a summer rainfall area in South Africa. Nutrient loss through flower removal and its effect on nutrient cycling was quantified. Optimum levels of ammonium nitrogen, phosphorus and potassium for the growth of P. neriifolia seedlings was determined and this formed the basis for the fertilization of mature P. neriijolia shrubs. The effects of inorganic fertilizers on growth and mineral cycling in mature P. neriijolia shrubs was monitored and the effectiveness of inorganic fertilizers, applied to redress nutrient loss, assessed. The primary response of seedlings of P. neriifolia to applied ammonium nitrogen, phosphorus and potassium was to ammonium nitrogen, with increased growth with increasing levels of applied ammonium nitrogen, to a maximum of 7 mM applied as 60 ml per week. Seedling response to applied phosphorus and potassium became noticeable only at higher levels of ammonium nitrogen supply, and at these levels seedlings were observed to respond favourably to relatively high phosphorus (0.65 mM) and potassium (1.25 mM) levels, also applied as 60 ml per week. Since nitrate nitrogen has been shown to be toxic to certain Proteaceae it was not tested in this investigation. However, results from the nursery trial suggested favourable P. neriijolia growth with a non-nitrate inorganic fertilizer with an NPK ratio of approximately 5: 1:3 (mass basis) and this was used as a basis for testing the effects of inorganic fertilizers on growth and nutrient cycling in mature P. neriijolia shrubs. Growth and nutrient cycling was monitored in mature P. neriijolia shrubs for four years: two years prior to the application of inorganic fertilizers and two years with the application of inorganic fertilizers, including unfertilized control shrubs. Two inorganic fertilizer preparations were tested. Both had as their base the commercial slow-release urea based fertilizer, Plantosan, which has an NPK ratio of 5: 1:3. This was supplemented with either ammonium sulphate or urea at a rate of 80 g per running metre every three months. Whole shrub dimensions showed similar growth of P. neriijolia shrubs cultivated in a summer rainfall area to the growth of the species in its natural habitat. Applied fertilizers did appear to increase growth, although these results became apparent only after 18 months. As recorded in other Proteaceae, the stem length of all shrubs decreased with increasing age of the shrubs although this decrease was less in shrubs receiving inorganic fertilizers. Branching did not appear to be affected by shrub age or the application of inorganic fertilizers. However, shrub reproductive productivity did increase with age, with greater increases in fertilized shrubs. Furthermore, flowers from fertilized shrubs were larger than those from unfertilized shrubs, although this phenomenon also only became apparent after 18 months. There was also a change in nutrient allocation patterns with those shrubs growing on soils of lowest nutrient availability directing more resources to root growth. This appeared to occur at the expense of stem material which, in each case, accounted for more than 50% of the total shrub biomass.Although shrub age and the application of fertilizers did influence total shrub growth, the timing of growth events were not affected. They were, however, not synchronous to growth events in P. neriijolia growing in its natural habitat. Vegetative growth showed a peak in early spring (September) and the peak reproductive period was in autumn (March, April and May). Maximum litter production (comprising more than 90% leaf litter) occurred in late autumn to early summer (May to December) and this, too, was not affected by shrub age or the application of inorganic fertilizers. Proteoid root occurrence was greatest in late winter/spring (August to November), co-incident with peak above-ground vegetative growth. There are two models that have been developed to describe the growth of overstorey shrubs in mediterranean ecosystems. In the first, the availability of nutrients is described as being of over-riding importance in determining growth events, while in the second model, soil moisture and temperature are regarded as primary growth detenninants. Neither model could adequately explain the shift in phenophase observed in P. neriifolia cultivated in a summer rainfall area. However, soil moisture and temperature do appear more important in determining phenophase events, particularly since the application of inorganic fertilizers did not appear to alter the timing of these growth events. Nevertheless, the importance of nutrients cannot be ignored as growth can occur only provided sufficient nutrients are available. Seasonal variations in nutrient concentrations of leaf, stem, floret and bract material were observed both prior to and after the application of inorganic fertilizers. However, of importance is that only shrubs receiving Plantosan plus ammonium sulphate retained comparable nutrient levels in tissue types compared with nutrient levels in the corresponding tissue types prior to the application of inorganic fertilizers. Shrubs receiving Plantosan plus urea and unfertilized shrubs had lower nutrient levels suggesting growth at the expense of previously absorbed nutrients. This was supported by a change in nutrient allocation patterns, particularly more nutrients in below-ground biomass in shrubs of the latter two treatments. The cycling of nitrogen, phosphorus and potassium was measured prior to and after the application of inorganic fertilizers. During nutrient cycling, the amount of nitrogen circulated was larger than the amount of potassium which, in turn, was larger than the amount of phosphorus. Three nutrient pools, in the above- and below-ground biomass and the soil, were measured and these comprise the plant/soil system. Inputs into the plant/soil system measured were from rainfall and inorganic fertilizers. Nutrient flows within the plant/soil system measured were leaching, due to rainfall, from the shrub onto the soil, litter production and decomposition, and nutrient uptake by the shrubs, into above- and below-ground nutrient pools. Losses from the plant/soil system recorded in this study were losses from the soil through stream-water, and the largest loss, loss through the removal of flowers for commercial sale. In the absence of flower harvesting the flow of nutrients in the plant/soil system, combined with inputs from rainfall, appeared adequate for the continued growth of the shrubs. However, in the presence of flower harvesting there appeared to be a nutrient budget deficit. This deficit appeared to worsen with increasing shrub age and increasing reproductive productivity in the absence of inorganic fertilizer applications. This was confirmed by nutrient depletion from the soil available nutrient pool. Although inorganic fertilizers did not dramatically alter soil total nutrient pools, soil levels of soluble nitrogen and available phosphorus did show slight increases but not in accordance with the levels of fertilizers applied. It is likely that a high proportion of the applied fertilizers was lost to the plant/soil system before becoming available to the system. This could have occurred through leaching through the soil profile although this was not measured in this study. Nevertheless, inorganic fertilizers did appear to compensate for nutrient loss through the removal of flowers for commercial sale, and the ammonium sulphate supplemented preparation resulted in the most favourable response. Due to a number of cultivation practices which affected the growth of the P. neriifolia shrubs, results are not always strictly comparable with natural systems. However, a number of results obtained in this invegstigation do have horticultural implications and these are briefly discussed with regard to the cultivation of the Proteaceae, particularly P. neriifolia cultivation. / Thesis (Ph.D.)-University of Natal, Durban, 1991.

Gnidia L., variously estimated to contain 100–160 species, is the largest genus in the sub-cosmopolitan family Thymelaeaceae. Most species are shrubby, and occur in tropical and southern Africa, with one species reaching southern India and Sri Lanka, and 14 species endemic to Madagascar. Assorted segregate genera have been established using characters considered by some as too few, too trivial or unreliable. Generic limits have been contentious with authors following either a narrower concept of Gnidia or a broader circumscription within which segregate genera are placed in synonymy under Gnidia. Regional treatments for African and Madagascan floras have been published over the last century until very recently, but the genus was last revised in its entirety 153 years ago. Today, a broad-based concept of Gnidia is generally recognised, but there is no modern infrageneric classification, and species relationships are poorly understood. Homogenous groups of species are identified by their similarities of leaf length and width or bract length and width ratios. Species comprising the homogenous groups for leaf ratios differ to those comprising the homogenous groups based on bract ratios, and there is no correlation between leaf and bract length and width ratios. This suggests that the factors influencing leaf diversity differ from those influencing bract diversity. Bracts differ most from leaves in species with capitate inflorescences, and involucres of several layers of bracts likely protect reproductive organs (flowers) in heads. Previously overlooked morphological and micromorphological details, and morphometric analyses of leaf, bract and floral dimension data help define individual species, and clades of species derived from phylogenetic analyses of molecular data. Evidence from a phylogenetic analysis of nuclear ribosomal and plastid DNA sequence data confirms the polyphyly of Gnidia. Three lineages contain Gnidia species and species of genera from southern Africa, southern South America or Australia, while another lineage corresponds largely to the previously recognized genus Lasiosiphon. The genus Lasiosiphon is reinstated characterised by flowers mostly in heads, bracts different from the leaves, and the presence of smooth hairs; it now includes species with tetramerous flowers as well as ones with pentamerous flowers. Gynodioecy is recorded for the first time in a single species and represents the first documented example of sexual polymorphism involving unisexual flowers in Gnidia and sub- Saharan Thymelaeaceae. The findings of this thesis are discussed in terms of their phylogenetic value and contribution to our better understanding of the generic limits of Gnidia and its relationships with other southern hemisphere Thymelaeoideae. The circumscription and generic affinities of Gnidia as suggested by results presented in this thesis are compared to previous classification systems for congruence and dissimilarity. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2010.

There is a resurgence of interest in many countries in medicinal plants and their curative properties (HARBORNE & BAXTER, 1993). Little work has previously been conducted on the Sterculiaceae species, especially those located within South Africa. This was a perfect opportunity to broaden the available information on the medicinal properties and chemical constituents of this family, within KwaZulu-Natal. Of the 50 genera of the Sterculiaceae family, six are located in South Africa: Cola, Oombeya, Hermannia, Melhania, Sterculia and Waltheria . Seven Sterculiaceae species were chosen for investigation. They varied in growth type and use in traditional medicine. These species included: Oombeya rotundifolia, D. burgessiae, D. cymosa, Cola natalensis, C. greenwayi, Hermannia depressa and Sterculia murex. Plant material used in the study was collected from a variety of areas, all within KwaZulu-Natal or the Northern Province. There were two collection sites for D. rotundifolia, from differing habitats, and results were compared. The material was screened pharmacologically for anti-bacterial activity using the disc-diffusion assay and Minimal Inhibitory Assay (MIC), and for antiinflammatory activity using the COX-1 assay. Only D. rotundifolia and C. natalensis were tested for anti-bacterial activity using the disc-diffusion assay as the disc-diffusion asay was found to show inconsistencies in the results obtained. Bacteria used included: Escherichia coli and Klebsiella pneumoniae being Gram-negative, and Micrococcus luteus, Staphylococcus aureus and Staphylococcus epidermidis being Gram-positive. D. rotundifolia exhibited activity, both anti-bacterial and bacteriostatic, in the leaf, twig and bark extracts from both collection sites. Only the water extract obtained from the leaf material of C.natalensis exhibited slight anti-bacterial activity against S. epidermidis. Minimal inhibitory concentration (MIC) values were determined using a microdilution assay (25 mg ml-1 serially diluted 50 % to 0.195 mg ml-1). Bacteria used in the screening were: B. subtilis, E. coli, K. pneumoniae and S. aureus. None of the water extracts showed any antibacterial activity. Good MIC values were exhibited by D. cymosa ethanolic leaf extracts, C. greenwayi leaf ethyl acetate extracts especially against K. pneumoniae (0.78 mg ml-1) and S. aureus (0.39 mg rnl-1) and H. depressa ethanol and ethyl acetate leaf, stem and root extracts. D. burgessiae and S. murex showed low activity, with insignificant MIC values. D. rotundifolia plant material yielded the highest anti-inflammatory activity of all the plant species, with the extracts from the Umgeni Valley Nature Reserve(UVNR) showing the best results. The lowest activity was recorded in the aqueous bark extracts (5% inhibition)and the highest from the ethanolic leaf extract (97% inhibition). D. cymosa extracts showed high activity in ethanolic leaf and twig extracts with low activity in all the other extracts. D. burgessiae, C. greenwayi and S. murex extracts showed high activity in both ethanolic and dichloromethane extracts from leaf and twig material. Activity occurred in the dichloromethane extracts of H. depressa obtained from the stem (78%) and root (81%) extracts. C. natalensis extracts showed insignificant activity. Plant material was phytochemically screened for alkaloids, saponins, tannins, cardiac glycosides and cyanogenic glycosides. No alkaloids were detected using pH-partitioning and no cyanogenic glycosides were observed (TLC sandwich method) in any of the extracts of the seven species screened. Using the gelatin salt-block test, tannins were found to be present in the leaf and twig material of D. rotundifolia, the leaf material of C. greenwayi and the leaf, stem and root material of H depressa. The froth test indicated that saponins were present in the leaf and twig material of D. rotundifolia and leaf, root and stem material of H. depressa. The haemolysis test indicated the presence of saponins in the D. rotundifolia bark material. Screening for cardiac glycosides detected cardienolides in the leaf, twig and bark material of D. rotundifolia, and bufadienolides were detected in D. rotundifolia , D. cymosa, D. burgessiae and S. murex. Five species screened were selected for isolation of active anti-bacterial compounds: D. rotundifolia, D. burgessiae, D. cymosa, C. greenwayi and H. depressa. Material was extracted by Soxhlet and isolation techniques employed were VLC, TLC separation, Sephadex LH-20 column chromatography and HPLC techniques. The isolated compounds were analysed by NMR and GCMS. All isolated compounds were fatty acids: Palmitic acid, Myristic acid, Lauric acid, Stearic acid, Acetic acid as welll as stearyl alcohol, eicosane and octadecane. The aqueous eaf extract of H. Depressa exuded a thick mucilage. The production of this mucilage from the H. depressa aqueous extract may have medicinal or commercial value. A technique to separate the mucilaginous extract from the leaf material was devised. After extraction, the extract was screened to determine its sugar content through gas chromatography. It was screened for its pharmacological properties: antibacterial and anti-inflammatory activity. The hydrolysing effect of -amylase and HCI on the extract was determined to find its potential use as a bulking agent for use as an appetite suppressant, laxative or against the effects of diarrhoea. It was concluded that the extract is not likely to break down easily in the human digestive system and may be effective against the three listed ailments . / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 2002.

The conservation of germplasm of indigenous plant species is vital not only to preserve valuable genotypes, but also the diversity represented by the gene pool. A complicating factor, however, is that a considerable number of species of tropical and sub-tropical origin produce recalcitrant or otherwise non-orthodox seeds. Such seeds are hydrated and metabolically active when shed and cannot be stored under conventional conditions of low temperature and low relative humidity. This poses major problems for the longterm conservation of the genetic resources of such species. Presently, the only strategy available for the long-term conservation of species that produce recalcitrant seeds is cryopreservation. Ekebergia capensis is one such indigenous species that produces recalcitrant seeds. The aim of the present study was to develop methods for the cryopreservation of germplasm of this species. Different explant types were investigated for this purpose, viz. embryonic axes (with attached cotyledonary segments) excised from seeds, and two in vitro-derived explants, i.e. ‘broken’ buds excised from in vitro-germinated seedlings and adventitious shoots generated from intact in vitro-germinated roots. Suitable micropropagation protocols were developed for all explant types prior to any other experimentation. Before explants could be cryopreserved it was necessary to reduce their water content in order to limit damaging ice crystallisation upon cooling. All explants tolerated dehydration (by flash drying) to 0.46 – 0.39 g gˉ¹ water content (dry mass basis) with survival ranging from 100 – 80%, depending on the explant. In addition, penetrating and non-penetrating cryoprotectants were used to improve cryo-tolerance of explants. The cryoprotectants tested were sucrose, glycerol, DMSO and a combination of sucrose and glycerol. Explant survival following cryoprotection and dehydration ranged from 100 – 20%. Cryoprotected and dehydrated explants were exposed to cryogenic temperatures by cooling at different rates, since this factor is also known to affect the success of a cryopreservation protocol. The results showed that ‘broken’ buds could not tolerate cryogen exposure. This was likely to have been a consequence of the large size of explants and their originally highly hydrated condition. Adventitious shoots tolerated cryogenic exposure slightly better with 7 – 20% survival after cooling in sub-cooled nitrogen. Limited shoot production (up to 10%) was obtained when axes with attached cotyledonary segments were exposed to cryogenic temperatures. In contrast, root production from axes cooled in sub-cooled nitrogen remained high (67 – 87%). Adventitious shoots were subsequently induced on roots generated from cryopreserved axes by applying a protocol developed to generate adventitious shoots on in vitrogerminated roots. In this manner, the goal of seedling establishment from cryopreserved axes was attained. Each stage of a cryopreservation protocol imposes stresses that may limit success. To gain a better understanding of these processes the basis of damage was investigated by assessing the extracellular production of the reactive oxygen species (superoxide) at each stage of the protocol, as current thinking is that this is a primary stress or injury response. The results suggested that superoxide could not be identified as the ROS responsible for lack of onwards development during the cryopreparative stages or following cryogen exposure. The stresses imposed by the various stages of a cryopreservation protocol may affect the integrity of germplasm. Since the aim of a conservation programme is to maintain genetic (and epigenetic) integrity of stored germplasm, it is essential to ascertain whether this has been achieved. Thus, explants (axes with cotyledonary segments and adventitious shoots) were subjected to each stage of the cryopreservation protocol and the epigenetic integrity was assessed by coupled restriction enzyme digestion and random amplification of DNA. The results revealed little, if any, DNA methylation changes in response to the cryopreparative stages or following cryogen exposure. Overall, the results of this study provided a better understanding of the responses of germplasm of E. capensis to the stresses of a cryopreservation protocol and two explant types were successfully cryopreserved. Future work can be directed towards elucidating the basis of damage incurred so that more effective protocols can be developed. Assessment of the integrity of DNA will give an indication as to the suitability of developed protocols, or where changes should be made to preserve the genetic (and epigenetic) integrity of germplasm. / Thesis (Ph.D.)-University of KwaZulu-Natal, Westville, 2011.

No abstract available. / Thesis (Ph.D.)-University of Natal, Pietermaritzburg, 2003.