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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Mechanistic Study of USP15-Dependent Deubiquitination and Characterization of Natural Compounds that Modulate the Nrf2-Keap1 Antioxidant Response

Villeneuve, Nicole Frances January 2011 (has links)
Nrf2 (NF-E2-related factor 2) is a transcription factor that regulates a battery of downstream genes that contain an antioxidant response element (ARE) in their promoters, including intracellular redox-balancing proteins, phase II detoxifying enzymes, and transporters. These Nrf2-dependent proteins work in collaboration to protect against many diseases where oxidative stress plays an essential role in disease onset and progression. Consequently, it is imperative to understand the basic molecular mechanisms of how Nrf2 is regulated so we can target this pathway for disease prevention and treatment.Nrf2 is mainly regulated at the protein level by the ubiquitin proteasome system. Under basal conditions Nrf2 is constantly ubiquitinated by the Keap1-Cul3-E3 ubiquitin ligase complex and subsequently degraded by the 26S proteasome. Currently, regulation of the Nrf2-Keap1 pathway by ubiquitination is largely understood. However, the mechanism responsible for removal of ubiquitin conjugated to Nrf2 or Keap1 remains unknown. In this dissertation, we identified two molecular mechanisms that are important in understanding how the Nrf2-Keap1 pathway is regulated: (i) USP15 negatively regulates the Nrf2-Keap1 pathway by deubiquitinating Keap1 and (ii) deubiquitinated-Keap1 binds in the Cul3-Keap1-E3 ligase complex more tightly than ubiquitinated-Keap1. Additionally, (iii) we demonstrated the importance of the Nrf2-Keap1 pathway in USP15-dependent paclitaxel-chemoresistance.Under oxidative stressed or induced conditions the ability of the E3-ligase to target Nrf2 for degradation becomes impaired. As a result, Nrf2 is stabilized and free Nrf2 translocates to the nucleus and initiates transcription of ARE-bearing genes. Activation of this pathway is advantageous for chemoprevention. In Chapters 4 and 5, we identified and characterized two activators of the Nrf2 cytoprotective pathway, oridonin and cinnamic aldehyde. These compounds inhibit Cul3-Keap1-dependent degradation of Nrf2, stabilize Nrf2 protein levels, and activate the antioxidant response. Furthermore, both compounds are able to protect against cytotoxic and genotoxic stress-induced cell death. Moreover, our study on USP15 has elucidated an additional mechanism that allows small molecules, such as oridonin, to activate Nrf2 by causing a switch in ubiquitination from Nrf2 to Keap1. Taken together, these findings further our understanding of how the Nrf2-Keap1 pathway is regulated, which is imperative in targeting this pathway for chemoprevention or chemotherapy.
2

TIFAB Links Innate Immune Signaling to the Cellular Stress Response in Myeloid Malignancies

Niederkorn, Madeline R. 22 October 2020 (has links)
No description available.
3

Die Funktionen des COP9 Signalosoms und des assoziierten USP15 im Ubiquitin-Proteasomsystem

Hetfeld, Bettina Kathrin Johanna 19 July 2006 (has links)
Das COP9 Signalosom (CSN) ist ein hoch konservierter Proteinkomplex, der an der Regulation des Ubiquitin (Ub)-26S Proteasomsystems (UPS) beteiligt ist. Das UPS ist die wichtigste Proteolysemaschinerie in eukaryotischen Zellen, bei der Proteine über eine dreistufige Kaskade der Enzyme E1-E3 mit einer Ub-Kette markiert werden, die als Erkennungssignal für den Abbau durch das 26S Proteasom dient. Das CSN gilt als Paralog zum Lid, einem Subkomplex des 26S Proteasoms, und interagiert mit einer Vielzahl von Proteinen, unter anderem mit E3-Ligasen und Kinasen. In dieser Arbeit konnte die direkte Bindung des CSN an das 26S Proteasom gezeigt werden, was zu einem Einfluss auf die Peptidaseaktivität des 26S Proteasoms in vitro führt. In Flag-Pulldown-Experimenten aus B8 Mausfibroblasten, die stabil mit Flag-CSN2 transfiziert waren, wurde ein vollständiger Flag-CSN-Komplex nachgewiesen, der mit dem 26S Proteasom assoziiert vorliegt. Co-Immunpräzipitationen beider Komplexe in vitro wiesen auf eine konzentrationsabhängige Verdrängung des Lid-Subkomplexes durch das CSN hin. Diese Interaktion führte zur Reduktion der proteolytischen Aktivität des 26S Proteasoms. Darüber hinaus wurde eine assoziierte deubiquitinierende Aktivität am CSN entdeckt und als USP15 identifiziert. Die Charakterisierung von USP15 zeigte, dass es durch die am CSN assoziierte Kinase CK2 phosphoryliert und stabilisiert wird. Erstmalig konnte durch Inhibitorstudien mit ortho-Phenanthrolin eine Metallabhängigkeit der Aktivität von USP15 nachgewiesen werden, die zur Identifizierung eines bisher unbekannten Zn-Fingers führte. Mutationsanalysen des Zn-Fingers zeigen, dass dieser für die Bindung und Spaltung von Ub-Ketten, nicht aber von linearen Ub-Konstrukten, notwendig ist. In Zellexperimenten konnte nachgewiesen werden, dass USP15 die E3 Ligase Rbx1 stabilisiert, was vermutlich auf eine Umkehr der Autoubiquitinierung zurückzuführen ist. Das CSN scheint somit sowohl das 26S Proteasom als auch die E3-Ligasen direkt zu beeinflussen. Die Ergebnisse dieser Arbeit stellen eine Vertiefung der Erkenntnisse über das CSN als Regulator des UPS dar. / The COP9 signalosome (CSN) is a conserved protein complex that is involved in the regulation of the ubiquitin (Ub)/26S proteasome system (UPS). The UPS is the most important degradation machinery in eukaryotic cells. By the concerted action of three enzymes, E1-E3, proteins are labelled with a Ub-chain that serves as a recognition signal for the degradation by the 26S proteasome. The CSN is homologous to the lid, a subcomplex of the 26S proteasome, and interacts with numerous proteins, including E3 Ub ligases and kinases. In this study a direct interaction of the CSN with the 26S proteasome could be shown which has consequences for the peptidase activity of the 26S proteasome in vitro. In Flag-pull-down experiments from mouse B8 fibroblasts, that permanently expressed Flag-CSN2, an intact Flag-CSN complex was detected that is associated with the 26S proteasome. Co-immunoprecipitation of both complexes in vitro indicated a concentration-dependent replacement of the lid subcomplex by the CSN. This interaction led to a decrease of the proteolytic activity of the 26S proteasome. Moreover, a deubiquitinating activity associated with the CSN was discovered and identified as USP15. The USP15 was phosphorylated by the CSN-associated kinase CK2 that stabilised the enzyme. For the first time inhibitor studies with ortho-phenanthroline demonstrated a metal-dependency for the activity of USP15 that could be attributed to a formerly unidentified Zn-finger. Mutational analysis of the Zn-finger showed that it is necessary for the binding and cleavage of poly-Ub-chains but not for linear Ub-constructs. Cell culture experiments demonstrated a stabilisation of the E3 ligase Rbx1 by USP15 most likely by reversing its autoubiquitination. Therefore the CSN seems to directly influence the 26S proteasome as well as E3 ligases in their functions. These results expand the present knowledge on the CSN as a regulator of the UPS.

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