Thesis (Ph. D.)--University of Sydney, 2001. / Title from title screen (viewed January 19, 2009) Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy to the School of Biological Sciences, Faculty of Science. Includes bibliographical references. Also available in print form.

Thesis (Ph.D.) - University of Queensland, 2004. / Includes bibliography.

Thesis (Ph.D.)--Murdoch University, 2008. / Thesis submitted to the Faculty of Sustainability, Environmental and Life Sciences. Includes bibliographical references (p. 98-109)

Thesis (M. Sc.)--University of Adelaide, 1988. / Includes bibliographical references (leaves 131-150).

This is the first study to investigate and provide definitive evidence that the plant pathogen Phytophthora cinnamomi is a significant threat to the mammal fauna of Western Australia. This study investigated the impact of P. cinnamomi-induced habitat disturbance and degradation on Antechinus flavipes leucogaster (yellow-footed antechinus) or mardo. Phytophthora cinnamomi is an introduced and invasive soil-borne plant pathogen that kills many common and structurally important plant species, which results in significant changes to the structural characteristics of affected areas. An evaluation of P. cinnamomi affected and unaffected areas of the northern jarrah (Eucalyptus marginata) forest revealed significant declines in the structure, composition and complexity of all areas affected by P. cinnamomi. Dieback Expression Score values ranged from a mean value of 1.88 ± 1.01 to 3.8 ± 0.41 at the P. cinnamomi affected sites, indicating a high degree of disturbance. A non-metric multidimensional scaling (MDS) analysis using 16 habitat variables identified significant (ANISOM: R=0.343, P<0.003) separation among affected and unaffected sites. A SIMPER analysis revealed that ground and shrub cover vegetation, small and total log densities, percentage leaf litter cover, and the densities of small, medium, tall single crowned and total Xanthorrhoea preissii were the greatest contributors separating affected and unaffected areas. Presently, our understanding of how P. cinnamomi affects the fauna of Western Australia is limited. This providing a unique opportunity to examine how P. cinnamomi-induced disturbance impacts upon the mardo. The mardo is a small insectivorous marsupial that is regarded as being common and a habitat generalist that occupies a broad range of forest and woodland habitats throughout the south-west of Western Australia. Until the present study, the specific habitat requirements, and therefore the factors limiting the present distribution of the mardo have received little attention. Therefore, in addition to being the first study to evaluate the impact of P. cinnamomi on Western Australian fauna, this study also provides important information about the present distribution of the mardo. Detection-nondetection mark-release surveys conducted in P. cinnamomi affected and unaffected regions of the northern jarrah forest, revealed that although, mardos were recorded at most sites, the number of mardo individuals, captures and detections were considerably lower at P. cinnamomi affected areas. Patch Occupancy analysis, using an information theoretic approach, revealed that the probability of a mardo occupying a region of the northern jarrah forest affected by P. cinnamomi ranged from a likelihood of 0.0 to 25.0%, while in contrast there was a 41.0 to 51.0% likelihood of a mardo occurring among unaffected regions. This discovery supports the hypothesis that P. cinnamomi-induced habitat disturbance impacts upon the distribution of the mardo. An evaluation of the micro-habitat features important to the mardo using Patch Occupancy modelling using an information theoretic approach identified large logs and X. preissii densities as positive contributors to the present distribution of the mardo in the northern jarrah forest. Indeed, the likelihood of a mardo occupying an area with large logs and dense patches of X. preissii ranged from 62.2% to 85.0%. In contrast, in the P. cinnamomi affected sites with lower X. preissii densities the patch occupancy probabilities ranged from 0.0% to 45.7%. Logs and X. preissii strongly contribute to the understorey and may increase nest locations and cover while offering protection from predators. Mardos may avoid P. cinnamomi affected areas because of lower X. preissii densities, which may result in fewer nest locations, reduced cover and an increased likelihood of predation. However, the results of the study must be treated as preliminary findings, therefore there may be additional environmental related or unrelated to P. cinnamomi factors that may also contribute to the occupancy rates of the mardo. Therefore, further studies and research on the ecology and biology of the mardo is strongly encouraged. Until this research is conducted, P. cinnamomi most be considered as significant threat to the conservation of the mardo. Therefore, the conservation of the mardo in the northern jarrah forest depends on limiting the spread and impact of P. cinnamomi, as well as the retention of large logs and tall X. preissii. Given that large logs and tall X. preissii contribute to the distribution of the mardo, strong consideration must be given to using these natural elements to rehabilitate the most severely disturbed areas of the northern jarrah forest. Consideration must be given to the conservation of other small and threatened mammal species that inhabit susceptible plant communities in the south-west of Western Australia. An understanding of how P. cinnamomi impacts on the mardo and other native mammals will contribute to our ability to control, protect and manage vulnerable communities and ecosystems in Western Australia. If the spread and impact of this pathogen is left unchecked, the ultimate consequence to the conservation of many small to medium native mammals that are dependant on structurally complex habitat may be devastating.

The pouched mouse, Saccostomus campestris is widely distributed south of the Sahara, inhabiting both subtropical and tropical latitudes and a number of different biotic zones, where it breeds seasonally. In North temperate latitudes, reproduction in small mammals is controlled by photoperiod however this cue becomes less influential as latitude decreases towards the equator. The aim of the present study is to establish the role of photoperiod in the environmental control of reproduction in a seasonally breeding small mammal at low latitudes in a highly unpredictable environment. Spermatogenesis of domesticated and Fl-generation pouched mice was not inhibited by short daylength while decreasing daylength significantly affected the oestrous cycle of adult domesticated female pouched mice. Photoperiod had little effect on the oestrous cycle of F I-generation females while a possible inherent circannual endogenous rhythm controlled inhibition of reproduction in these females. Body mass of male and female juvenile pouched mice was consistently lower in short daylength and in juvenile female pouched mice the onset of fertility may be weight-dependent. The attainment of sexual maturity of domesticated and FIlF2-generation females was retarded but not halted in short daylength and females in long daylength reached puberty 7.8 - 10.2 days earlier. Short daylength also lengthened the interval between vaginal perforation and first oestrus. Puberty in juvenile females was age-dependent as both domesticated and FIlF2-generation males attained puberty at 50 days of age, although fewer males were fertile in long daylength than short daylength. Although litter size of pouched mice was smaller in short daylength for both domesticated and wildcaught females this was not due to a reduction in the ovulation rate. Domesticated females had significantly larger litters than wild-caught females. Male and female pouched mice have evolved different reproductive strategies as males become sexually mature at the same age irrespective of photoperiod and remain fertile throughout the year. In contrast, females tend to be more complex as juveniles delay reproductive maturity and adults become nonreproductive in short daylength. However, in the presence of a fertile male and if environmental conditions are favourable, in short daylength, females can become reproductively active within approximately 3 days. Thus, although the pouched mouse has adopted a purely opportunistic reproductive strategy, vestiges of photoresponsiveness are still present in the female. The seasonality exhibited in the wild is therefore due to the female. Pouched mice live in a highly unpredictable environment so the sole use of photoperiod to regulate reproduction would be disadvantageous.

Thesis (M.App.Sc.)--University of Adelaide, Dept. of Animal Science, 2002. / "September 2002" Bibliography: leaves 77-85.

Bibliography: leaves 131-150.

This thesis is involved with changes that have occurred to small mammal populations following a major disturbance in the Anglesea region as a result of the 1983 Ash Wednesday fires. Fire, with its effects on spatial and temporal heterogeneity, was found to be an important factor in the maintenance of vegetation and small mammal community structure and diversity in the region. Successional changes in vegetation and small mammal communities were described by multivariate analyses, using data collected annually from 22 study sites. The use of factor analysis techniques, in reducing the annual capture data content, enabled long-term changes in the structure of mammal communities to be interpreted. The small mammal communities in the coastal heath and forest vegetation in the Anglesea region show evidence of a general resilience, (the degree and speed of recovery), to disturbance. Two phases of successional response to fire by mammal species have been proposed; a ‘re-establishment’ phase which occurs in the initial 5-6 years post-fire and is accompanied by rapid increase in species’ abundance, and a subsequent ‘maintenance’ phase accompanied by relatively minor changes in abundance. Habitat Suitability Indices were produced relating to these phases. Vertical density measures of understorey shrubs and herb layers showed significant relationships with small mammal species abundance at the study sites. Long term studies following major disturbances are needed to distinguish between short term recovery of plant and animal species and long term changes in these species. Studies extending over a number of years enable a better directional view of changes in small mammal communities than can be determined from . observations made over a short period. As a part of the investigation into temporal change, it was proposed to undertake trial reintroductions of the Swamp antechinus, Ant echinus minimus, a marsupial dasyurid species which was trapped in the area prior to the 1983 fire, but rarely subsequently. Other more commonly observed native small mammal species (e.g. Rattus fuscipes,R. lutreolus, Antechinus stuartii, Sminthopsis leucopus) had re-invaded the proposed reintroduction site after this fire. Failure of A. minimus to re-establish may have been due to spatial separation of the pre-fire populations coupled with the extensive area burnt in 1983, A source population of the species was located about 100km to the west and habitat utilization and interspecific and niche relationships between the species making the small mammal community explored. Discriminant analysis revealed some spatial separation of species within a habitat based on structural vegetation factors rather than floristic factors. Temporal separation of species was observed, asA. minimus were more active than Rattus species during daylight periods. There was evidence of micro-habitat selection by species, and structural vegetation factors were most commonly identified in statistical analyses as contributing towards selection by small mammal species. Following a theoretical modelling study three reintroduction trials were carried out near Anglesea during 1992-94. Individuals were subsequently radio tracked, and habitat relationships between the species in the small mammal community investigated. Although successful breeding of A, minimus occurred during the latter two trials, the subsequent fate of offspring was not determined. Invasive techniques required to adequately monitor young animals were considered potentially too damaging. Telemetry studies indicated a preference of A. minimus for short, wet heath vegetation. Structural vegetation factors were identified as being significant in discriminating between capture locations of species. Small scale and inexpensive trial reintroductions have yielded valuable additional data on this species and may be viewed as a useful tool in the conservation of other small native mammals.

"September 2002" Bibliography: leaves 77-85. Examines the persistence of the yellow-footed antechinus using live trapping in small, remnant patches and strips of forest, to document autecological sata and the investgate occurrence, breeding activity and inter-patch movements. Radio-tracking was conducted to compare home range properties of lactating females in restricted and unrestricted habitat.