Thesis (Ph.D.)--Mississippi State University. Department of Basic Sciences. / Title from title screen. Includes bibliographical references.

The purpose of the present study is to present research data on the propagation of the southern spotted channel catfish.

The channel catfish, Ictalurus punctatus (Rafinesque), was first introduced into Utah Lake in the summer of 1911, and has since been stocked in the lake on numerous occasions. It has only been in the last few years that the channel catfish has become an important game fish in Utah. As the value of the channel catfish, as a game fish, increased, it has become increasingly important to the state to maintain this species for present and future generations. This study was initiated in 1958 and completed in 19 60, and was financed by the Utah State Department of Fish and Game. Data on certain phases of the channel catfish life history were investigated to provide information to aid in management of this species. The following phases were studied: age and rate of growth; age composition of the population; reproduction success; food habits; movements; and extent of the fishing pressure.

Thesis(M.S.)--Auburn University, 2006. / Abstract. Vita. Includes bibliographic references.

Thesis--Auburn University, 2009. / Abstract. Vita. Includes bibliographical references (p. 58-68).

The use of fatty acid (FA) analysis has become an important tool in recent years to investigate a broad spectrum of questions in fisheries and aquatic ecology. One of these applications has been the use of FA profiles as biomarkers for indicating diet and recent feeding history of fishes and other aquatic consumers. Differences in forage FA profiles and spatial differences in food web structure within aquatic systems may lead to corresponding spatial patterns of FA profiles in consumers, thereby facilitating the potential applicability of FA biomarkers as indicators of habitat use and origin for mobile consumers such as fishes. However, little information is available regarding differences in FA profiles among habitat types in river-floodplain ecosystems and the time-scale over which fish FA profiles change when fish move between habitats that differ in the FA profiles of prey resources. The objectives of this study were to test whether the tissue FA profiles of channel catfish (Ictalurus punctatus) differed among three reaches of the lower Kaskaskia River and its floodplain lakes, to determine the time-course of tissue FA profile turnover when fish are relocated to a new habitat type, and to compare FA profiles among muscle, liver, and adipose fin tissues in channel catfish. Fatty acid profiles of channel catfish were significantly different among sites, especially between upper and lower river sites, and between river channel and oxbow lake sites, suggesting differing energy sources among habitats and river reaches in the Kaskaskia system. More specifically, there was a significant increase in the essential FAs, 18:2n-6 and 18:3n-3, in channel catfish with increasing distance downstream, which could reflect an increase in river-floodplain connectivity at downstream sites. Channel catfish transplanted from the Kaskaskia River to ponds at Southern Illinois University Carbondale showed a significant linear decrease in n-3 and medium-chain polyunsaturated FAs (MC-PUFA), and a significant linear increase in monounsaturates (MUFA) with longer residence time in a lentic environment. Liver tissue exhibited the fastest turnover rate of the three tissue types (< 2 weeks), with muscle and adipose fin tissue both displaying similar, longer turnover times (approximately 10 weeks). Results of this study support the use of FA profiles as indicators of energy sources for fishes in large river-floodplain ecosystems, including the potential for indentifying habitat-specific (river channel vs. floodplain lake) or river reach-specific energy sources. Additionally, results of this study provide a timeline for FA turnover in channel catfish tissues when fish move among habitats with distinct FA signatures, which is crucial for detecting temporal shifts in use of habitat-specific energy sources by channel catfish. Results also suggest that adipose fin tissue samples may be a less invasive alternative to muscle tissue for analysis of FA profiles in channel catfish. Improved understanding of which habitats or river reaches provide trophic support for riverine fishes through use of FA profile analysis has potentially important implications for habitat conservation and rehabilitation in river-floodplain ecosystem.

Metals are ubiquitous and naturally occurring; however, anthropogenic activities have elevated metal concentrations in river sediments above what would be expected naturally. One of the primary anthropogenic sources of metals in freshwater is contamination by mine tailings, a toxic slurry of waste rock and chemicals left over after ore minerals or coal extraction. Mining waste is most often stored in retention ponds, which sometimes leak or fail. One of the worst mine tailings disasters on record occurred on the Tisza River of Central Europe in the winter of 2000, releasing over 240,000 tons of mine tailings laced with metals into the natural environment. Elevated metals in freshwater can negatively affect fish and other aquatic organisms, raising concerns as to the long-term ecological consequences of the spill. Therefore, the objectives of this dissertation were to describe the ecological implications of metals pollution from mining on freshwater systems through an empirical case study of the Tisza River combined with controlled laboratory experiments of chronic cadmium exposure on a model species, channel catfish (Ictalurus punctatus). Specific research questions discussed in the following chapters include: (1.) What is the current distribution of metals in the lower Tisza River Basin and are metals transported from the main channel to floodplain habitats?; (2.) Is there evidence for bioaccumulation and/or trophic transfer of metals to fish in the Tisza?; (3.) What are angler’s perceptions and fish consumption risks in the lower Tisza river basin?; and (4.) What are the effects of sub-lethal exposure to cadmium on growth, development, metabolism, and stress response in a model fish species? The case study of the Tisza River Basin was conducted during early summer in 2013 and 2014. Water, sediment, and fish were collected from the Tisza River as well oxbow lakes along the lower basin. Samples were screened for metals via GF-AAS following standard methods. Additionally, we conducted interviews at each sampling location to determine fish consumption habits. Controlled laboratory exposures were conducted during summer of 2015. Eggs of channel catfish (Ictalurus punctatus) were fertilized in treatment water and raised to 6 month old fingerlings. Treatments of cadmium included concentrations of 0.5 µg L-1 (control), 2 L-1 (low) and 6 L-1 (high), with endpoints of growth, development, cellular stress, metabolism, and general stress response. Results indicate that lakes with the greatest connectivity trended toward elevated metals; however, chlorophyll a concentrations decreased suggesting dilution of nutrients from surrounding agriculture. River connectivity therefore increases ecosystem health of floodplain lakes by ameliorating eutrophication, but as a trade-off with potential contamination of metals. This may have implications for management strategies in the basin as fish from the oxbow lakes also trended toward higher concentrations of metals compared to the river main stem. Although we did not detect any indication that metals are biomagnifying through the fish community, fish are clearly taking up contaminants from the water and sediment. Additionally, although fish fillets generally fell below human consumption guidelines, surveys collected at field sites indicate disparities between health risks and perceptions of those risks. For example, many people believe that fish from the oxbow lakes present a lower risk for metals than the river main stem, converse to our findings. Exposure of channel catfish to cadmium concentrations similar to those observed in the Tisza Basin indicate that negative physiological effects, such as altered carbohydrate metabolism and subsequently growth, can occur in fish at muscle concentrations below consumption guidelines. Although cadmium in Tisza fish fillets were lower than expected, metals may still be problematic for the basin as they may disproportionately affect early life stages of fish. This could skew life histories of exposed populations compared to unaffected fish, potentially reducing growth rates, size at maturity, reproductive output, and lifespan; indicating the need for more paired field and laboratory assessments of chronic metals exposure.

Red fillet results in a profit loss for catfish processors and producers alike; however, neither the cause nor the abundance of red fillet has been studied extensively. Therefore, an assessment of red fillet in the catfish industry was conducted along with studies subjecting catfish to poor water quality and inoculation with Aeromonas sobria. Within every catfish harvest, 0.12% of fillets were rejected due to blotchy red coloration. Histology revealed congestion of erythrocytes indicating internal hemorrhaging, and A. sobria was isolated from 63% of all red fillets compared to 28% of acceptable fillets. Acute exposure to poor water quality did not produce red fillet in catfish despite high stress levels and mortality rates (22%). Inoculation with A. sobria did induce red fillet with similar coloration to red fillets obtained from catfish processors.

Toll-like receptor (TLR) ligands and phytochemical feed additives (PFAs) were evaluated in this study to determine the effects of immune stimulation on gut immunity in the zebrafish, Danio rerio, and the channel catfish, Ictalurus punctatus. Rag1-/- (MT) zebrafish were used to study how the TLR ligands β-glucan and resiquimod (R848) affect the innate immune system in the gut of MT zebrafish. Enhanced expression of marker genes (NITR9, NCCRP-1 and MPEG-1) indicated stimulation of Natural Killer (NK) cells, non-specific cytotoxic cells (NCCs) and macrophages. After challenge with Edwardsiella ictaluri, MT zebrafish stimulated with β-glucan demonstrated higher survival and the presence of more macrophages/monocytes in the gut than control MT zebrafish. A PFA test diet containing a blend of prebiotic fiber, oregano, thyme, cinnamon essential oils, and Yucca schidigera (ONE Current™, OC) was fed to channel catfish for 3 months in ponds to determine the effect on channel catfish fingerling growth. Fish were fed in ponds and a tank bacterial challenge followed to test the efficacy of the product. Catfish fed OC demonstrated greater weight gain and feed conversion ratios, higher survival after challenge with E. ictaluri, greater phagocytosis or binding by macrophages and cytotoxic cells. Catfish fed OC also demonstrated greater gut surface area after 2 months feeding OC. To elucidate the effect(s) of each of the compounds in the OC diet on gut immune responses and to determine if PFAs can decrease bacterial colonization and replication within gut tissues, WT and MT zebrafish were fed diets containing different compounds included in OC. Quantification of live bacteria from gut and kidney tissue was determined after challenge with E. ictaluri. Expression levels of immune response genes were evaluated after ingestion of PFAs. Actifibe, Essential oil 25 ppm (EO 25) and Actifibe + EO demonstrated the lowest infection and colonization rate, upregulation of immune response genes, and significantly higher survival when challenged with E. ictaluri. This study demonstrates the potential for application of TLR ligand and feed administered PFAs to improve fish health. Our findings provide a more comprehensive understanding of host gut/pathogen interactions as well as suggestions for novel disease control measures.

Incidence and prevalence of Edwardsiella piscicida has increased in Mississippi farm-raised catfish in recent years. Edwardsiella piscicida affects mostly market-sized catfish during the final stages of the production cycle resulting in significant economic losses. The objectives of this study were to determine the genetic variability of E. piscicida, assess virulence in channel and hybrid catfish, and evaluate the capacity of a live-attenuated E. ictaluri vaccine to protect channel and hybrid catfish against heterologous E. piscicida isolates. This work identified five discrete E. piscicida lineages, along with group specific associations of several virulence related genes. In general, E. piscicida was shown more virulent in hybrids than channel catfish, in line with previous work. Further, a live-attenuated E. ictaluri vaccine was shown to confer cross-protective immunity in channel and hybrid catfish against E. piscicida.