Em animais, a prevalência do câncer tem aumentado de forma significativa com o passar dos anos. As neoplasias mamárias representam o tipo mais frequente de câncer em cadelas, chegando a 52% da população de fêmeas, e entre os animais afetados, 50% das neoplasias se apresentam sob a forma maligna. O desenvolvimento e caracterização de modelos animais para o estudo de neoplasias humanas é de extrema relevância para a melhoria no diagnóstico e tratamento do câncer. Os tumores sólidos apresentam uma hierarquia entre as células que determina o desenvolvimento e o comportamento da neoplasia. Recentemente, tem-se estudado um pequeno grupo de células que apresentam diversas características das células-tronco normais encontradas nos tecidos. Estas células, denominadas Células Iniciadoras de Tumor (CITs), são descritas como sendo as principais responsáveis pelas falhas na quimioterapia e no aparecimento de recidivas tumorais, devido ao grande potencial de renovação e diferenciação que elas possuem. Desta maneira, nosso objetivo foi caracterizar linhagens celulares provenientes de neoplasia de glândula mamária de cadelas que pudessem ser utilizadas futuramente na pesquisa básica e aplicada em oncologia comparada. Além das alterações citogenéticas e imunocitoquímicas, verificamos que os cultivos celulares apresentaram quantidades distintas de populações positivas e negativas quanto à expressão de CD24 e CD44 bem como da atividade de aldeído-desidrogenase, porém, todos exibiram potencial tumorigênico in vitro através do ensaio de formação de tumoresferas / The prevalence of cancer in animals has increased significantly over the years. Mammary tumors are the most common cancer in dogs, reaching 52% of female population, and among affected animals, 50% of tumors are presented in the malignant form. The development and characterization of animal models for the study of human cancers is extremely important for improving the diagnosis and treatment of cancer. Solid tumors have a hierarchy of cells that determines the development and behavior of cancer. Recently, there has been studied a small group of cells with different characteristics from those normal stem cells found in tissues. These cells, known as tumor initiating cells (TICs), are described as being primarily responsible for the failures in chemotherapy and the appearance of recurrences, because of their potential for renewal and differentiation. Thus, our objective was to characterize cell lines derived from mammary gland neoplasia of dogs that could be further used for basic and applied research in comparative oncology. In addition to the cytogenetic and immunocytochemical changes, we found that cell cultures had different amounts of positive and negative populations of CD24 and CD44 expression and aldehyde dehydrogenase activity, however, all exhibited tumorigenic potential in vitro through tumorspheres formation

Em animais, a prevalência do câncer tem aumentado de forma significativa com o passar dos anos. As neoplasias mamárias representam o tipo mais frequente de câncer em cadelas, chegando a 52% da população de fêmeas, e entre os animais afetados, 50% das neoplasias se apresentam sob a forma maligna. O desenvolvimento e caracterização de modelos animais para o estudo de neoplasias humanas é de extrema relevância para a melhoria no diagnóstico e tratamento do câncer. Os tumores sólidos apresentam uma hierarquia entre as células que determina o desenvolvimento e o comportamento da neoplasia. Recentemente, tem-se estudado um pequeno grupo de células que apresentam diversas características das células-tronco normais encontradas nos tecidos. Estas células, denominadas Células Iniciadoras de Tumor (CITs), são descritas como sendo as principais responsáveis pelas falhas na quimioterapia e no aparecimento de recidivas tumorais, devido ao grande potencial de renovação e diferenciação que elas possuem. Desta maneira, nosso objetivo foi caracterizar linhagens celulares provenientes de neoplasia de glândula mamária de cadelas que pudessem ser utilizadas futuramente na pesquisa básica e aplicada em oncologia comparada. Além das alterações citogenéticas e imunocitoquímicas, verificamos que os cultivos celulares apresentaram quantidades distintas de populações positivas e negativas quanto à expressão de CD24 e CD44 bem como da atividade de aldeído-desidrogenase, porém, todos exibiram potencial tumorigênico in vitro através do ensaio de formação de tumoresferas / The prevalence of cancer in animals has increased significantly over the years. Mammary tumors are the most common cancer in dogs, reaching 52% of female population, and among affected animals, 50% of tumors are presented in the malignant form. The development and characterization of animal models for the study of human cancers is extremely important for improving the diagnosis and treatment of cancer. Solid tumors have a hierarchy of cells that determines the development and behavior of cancer. Recently, there has been studied a small group of cells with different characteristics from those normal stem cells found in tissues. These cells, known as tumor initiating cells (TICs), are described as being primarily responsible for the failures in chemotherapy and the appearance of recurrences, because of their potential for renewal and differentiation. Thus, our objective was to characterize cell lines derived from mammary gland neoplasia of dogs that could be further used for basic and applied research in comparative oncology. In addition to the cytogenetic and immunocytochemical changes, we found that cell cultures had different amounts of positive and negative populations of CD24 and CD44 expression and aldehyde dehydrogenase activity, however, all exhibited tumorigenic potential in vitro through tumorspheres formation

abstract: Cancer is a disease which can affect all animals across the tree of life. Certain species have undergone natural selection to reduce or prevent cancer. Mechanisms to block cancer may include, among others, a species possessing additional paralogues of tumor suppressor genes, or decreasing the number of oncogenes within their genome. To understand cancer prevention patterns across species, I developed a bioinformatic pipeline to identify copies of 545 known tumor suppressor genes and oncogenes across 63 species of mammals. I used phylogenetic regressions to test for associations between cancer gene copy numbers and a species’ life history. I found a significant association between cancer gene copies and species’ longevity quotient. Additional paralogues of tumor suppressor genes and oncogenes is not solely dependent on body size, but rather the balance between body size and longevity. Additionally, there is a significance association between life history traits and genes that are both germline and somatic tumor suppressor genes. The bioinformatic pipeline identified large tumor suppressor gene and oncogene copy numbers in the naked mole rat (Heterocephalus glaber), armadillo (Dasypus novemcinctus), and the two-fingered sloth (Choloepus hoffmanni). These results suggest that increased paralogues of tumor suppressor genes and oncogenes are these species’ modes of cancer resistance. / Dissertation/Thesis / Pipeline results for cancer genes / Phylogenetic regressions with correction tests / Pipeline results for housekeeping genes / Masters Thesis Biology 2019

No description available.

Melanoma is a highly malignant neoplasia with high rates of metastasis in humans and dogs. Regardless of being considered a highly immunogenic neoplasm, the function of the immune system is hampered by the expression of immune checkpoint molecules by the cancer cells. In contrast, soft tissue sarcomas are poorly immunogenic, as Tumor infiltrating Lymphocytes are lacking, or when present they are usually at the periphery of the tumor. Still, soft tissue sarcomas are considered immunosuppressed. Checkpoint molecules from the PD-axis are overexpressed in numerous human malignant neoplasia and have recently gained attention with a few reports in canine tumors. Immunotherapies against these checkpoint molecules have shown great efficacy in humans, but in order to determine translational approaches into canine patients, more research is needed. Here we determined the gene expression of Programed Death receptor-1, and its ligands PD-L1 and PD-L2 in canine tumors with two distinct immune profiles. Our results show that regardless of their immune profiles, melanoma versus soft tissue sarcoma, checkpoint molecules expression was higher in malignant tumors with a higher grade. Additionally, we evaluated the expression of these molecules in a set of patients that received histotripsy, which is a non-invasive and non-thermal ultrasound focused therapy that induces mechanical stress to the cells, leading to liquefactive necrosis. Here we reported a focal decrease of the expression of these checkpoint molecules in tissue sections obtain at the treatment interface, compared to those taken from untreated areas of the tumor. In addition, a positive relationship was noticed between the infiltration of CD3+ T lymphocytes and the expression of these checkpoint molecules in both canine melanoma, and soft tissue sarcoma. Our findings demonstrate that immunotherapies targeting these checkpoint molecules have a great potential for efficacy in canine neoplasia, along or combined with tumor ablation therapies that increased immune cell infiltration in poorly immunogenic neoplasia. / Doctor of Philosophy / Melanoma is a highly malignant tumor and very resistant to therapy for humans and dogs. At the same time, this neoplasia is usually highly infiltrated by cells from the immune system. However, this immune infiltration is often inhibited by molecules expressed by the melanoma cells. In contrast, soft tissue sarcoma is considered poorly immunogenic, as they often contain low levels of immune cell infiltrates but are still considered immune suppressed. In this study, we determined the expression of molecules that inhibit the effect of T lymphocytes, specifically Programed cell death receptor-1, PD-Ligand 1, and PD-Ligand 2 for these neoplasms with distinct immune profiles. We encounter that despite their immune profiles, the expression of these molecules is higher in malignant tumors. Additionally, we evaluated the expression of these molecules in a set of patients that received histotripsy, which is a non-invasive and non-thermal focused ultrasound therapy that induces mechanical stress to the cancerigenous cells, leading to its death (necrosis). Here we reported a focal decrease of the expression of these checkpoint molecules in tissue sections obtain at the treatment interface, compared to those taken from untreated areas of the tumor. In addition, a positive relationship was noticed between the infiltration of T lymphocytes and the expression of these checkpoint molecules in both canine melanoma, and soft tissue sarcoma. Our findings demonstrate that immunotherapies targeting these checkpoint molecules have a great potential for efficacy in canine neoplasms, along or combined with tumor ablation therapies that increased immune cell infiltration in poorly immunogenic neoplasia.

As neoplasias mamárias apresentam um grande desafio tanto para a medicina humana, quanto para a medicina veterinária. Esses tumores apresentam ampla heterogeneidade intertumoral e intratumoral, dificultando assim a busca por tratamentos eficazes. Recentemente, pesquisadores tem voltado sua atenção para uma população de células que apresentam características muito semelhantes as células-tronco. São as chamadas células iniciadoras de tumores (CITs). Estas são descritas como as principais responsáveis por falhas nas quimioterapias e no surgimento de recidivas tumorais, devido ao seu potencial tumorigênico, de auto-renovação e de resistência a drogas antineoplásicas. Entretanto, o estudo dessas células é limitado pelas dificuldades no isolamento e na caracterização pós-enriquecimento dessas células, devido à perda do fenótipo em modelos in vitro. Sendo assim, vários estudos estão buscando maneiras alternativas de enriquecer essa população. Uma das maneiras mais utilizadas, baseia-se na indução do processo de transição epitélio-mesenquimal, através da superexpressão de fatores de transcrição como SNAI1, SLUG, ZEB1 e ZEB2. Sendo assim, nós objetivamos expressar de maneira exógena os fatores de transcrição SLUG e ZEB1 em células oriundas de carcinomas mamários caninos, caracterizar seus efeitos nessas células e observar se esses fatores de transcrição seriam capazes de induzir o fenótipo de CIT. Primeiramente, quatro amostras de carcinomas mamários caninos foram analisados quanto sua morfologia e os níveis de expressão gênica de quatro fatores de transcrição associados a transição epitélio-mesenquimal: SLUG, STAT3, ZEB1 e ZEB2. Após, nós selecionamos duas dessas amostras (CC-20E e CL-28E), que apresentavam morfologia típica de células epiteliais e baixa expressão dos fatores de transcrição citados acima e expressamos de maneira exógena e de forma estável os fatores de transcrição SLUG e ZEB1, através do processo de transdução lentiviral. Entretanto, apenas a transdução com os plasmídeos contendo a região codificante de SLUG foi eficiente. Sendo assim, nós avaliamos os efeitos da expressão exógena de SLUG nas células CC-20E e CL-28E, quanto a alteração de morfologia e expressão de filamentos intermediários como citoqueratina, vimentina e actina. Além disso, nós avaliamos se a expressão exógena de SLUG poderia regular a expressão de outros genes associados a EMT, além de genes supressores de tumores, alvos de SLUG. Por fim, nós avaliamos se a expressão exógena de SLUG poderia induzir ao fenótipo de CITs, verificando se havia alteração na sensibilidade das células aos quimioterápicos doxorrubicina e paclitaxel, além de avaliar o potencial tumorigênico e de auto-renovação dessas células em cultivos de baixa aderência. A expressão exógena de SLUG nas células CC-20E e CL-28E, não induziu a alterações na morfologia epitelial das células. Entretanto, as células alteraram sua disposição em monocamada no cultivo, formando tipos de túbulos semidiferenciados, característicos do processo de EMT híbrido ou parcial. Além, disso, houve um equilíbrio entre a expressão dos filamentos intermediários de citoqueratina e vimentina nas células, além do aumento na expressão dos genes CDH1 (E-caderina) e CDH2 (N-caderina), resultado que sustentou a indução de EMT parcial. O processo de EMT parcial induziu maior resistência ao quimioterápico paclitaxel, além de potencializar a tumorigenecidade e a capacidade de auto-renovação das células em cultivos de baixa aderência. Sendo assim, no presente estudo, nós obtivemos um cultivo com características que mimetizam as CITs, demonstrando que os processos que induzem esse fenótipo são semelhantes tanto na espécie canina, quanto em humanos, sustentando a hipótese de que neoplasias mamárias caninas podem servir como modelo para o estudo das CITs e, consequentemente, do desenvolvimento neoplásico de tumores sólidos. / Mammary neoplasms present a major challenge for both human and veterinary medicine, due to intertumoral and intratumoral heterogeneity, hindering the search for effective treatments. Recently, researchers has highlighted a population of cells with features very similar to stem cells. Known as Tumor-Initiating Cells (TICs), they are described as the main responsible for chemotherapy failures and tumor recurrence, due to their tumorigenic potential, self-renewal ability and drug resistance. The study of TICs is limited mainly by their difficult isolation owing to specific markers absence, and furthermore, cells lose their phenotype when placed in vitro. Therefore, several studies are seeking for alternatives to enrich this population in regular cultures. One way is based on the epithelial-mesenchymal transition induction through of transcription factors overexpression, such as SNAI1, SLUG, ZEB1 e ZEB2. So, the aim of this study was to overexpresse the SLUG and ZEB1 transcription factors in a cell culture derived from canine mammary carcinomas, evaluate its effects and observe whether these transcription factors would be capable of inducing the TIC phenotype. First, four canine mammary carcinomas cell cultures were analyzed for their morphology and gene expression levels of four transcription factors associated with epithelial-mesenchymal transition: SLUG, STAT3, and ZEB1 ZEB2. After, we selected two samples (CC-20E and CL-28E) with typical morphology of epithelial cells and low expression of the transcription factors mentioned above. We then overexpress, stably, the transcription factors SLUG and ZEB1 by lentiviral transduction, However, only SLUG transduction was efficient. Then, we evaluated the effects of SLUG overexpression in CC-20E and CL-28E cells as the change of morphology, expression of intermediate filaments as cytokeratin, vimentin and actin. In addition, we evaluated whether SLUG overexpression could regulate the expression of other EMT-associated genes as well as tumor suppressor genes, and assessed evaluated the tumorigenic potential and self-renewal of these cells in low adherence cultures. Finally, we assessed whether SLUG overexpression could induce drug resistance through doxorubicin and paclitaxel sensivity assay. The SLUG overexpression did not induce modification in epithelial cell morphology, however, cells changed their arrangement in monolayer culture, inducing the semidifferentiated tubules, typical of hybrid or partial EMT process. In, addition, there was a balanced expression between cytokeratin and vimentin, possibly explained by an increase in CDH1 expression (E-cadherin) and CDH2 (N-cadherin) typical of partial EMT. Furthermore, the partial EMT generated cells presenting paclitaxel resistance, and enhanced the tumorigenic potential and self-renewal capacity of the cells on low adherent plates. Thus, in this study, we obtained a cell culture exhibiting features that mimics the TICs, demonstrating the mechanisms which regulate this phenotype are similar in dogs and humans, supporting the hypothesis that canine mammary carcinomas are a great model for the study of TICs and solid tumors development.

As neoplasias mamárias apresentam um grande desafio tanto para a medicina humana, quanto para a medicina veterinária. Esses tumores apresentam ampla heterogeneidade intertumoral e intratumoral, dificultando assim a busca por tratamentos eficazes. Recentemente, pesquisadores tem voltado sua atenção para uma população de células que apresentam características muito semelhantes as células-tronco. São as chamadas células iniciadoras de tumores (CITs). Estas são descritas como as principais responsáveis por falhas nas quimioterapias e no surgimento de recidivas tumorais, devido ao seu potencial tumorigênico, de auto-renovação e de resistência a drogas antineoplásicas. Entretanto, o estudo dessas células é limitado pelas dificuldades no isolamento e na caracterização pós-enriquecimento dessas células, devido à perda do fenótipo em modelos in vitro. Sendo assim, vários estudos estão buscando maneiras alternativas de enriquecer essa população. Uma das maneiras mais utilizadas, baseia-se na indução do processo de transição epitélio-mesenquimal, através da superexpressão de fatores de transcrição como SNAI1, SLUG, ZEB1 e ZEB2. Sendo assim, nós objetivamos expressar de maneira exógena os fatores de transcrição SLUG e ZEB1 em células oriundas de carcinomas mamários caninos, caracterizar seus efeitos nessas células e observar se esses fatores de transcrição seriam capazes de induzir o fenótipo de CIT. Primeiramente, quatro amostras de carcinomas mamários caninos foram analisados quanto sua morfologia e os níveis de expressão gênica de quatro fatores de transcrição associados a transição epitélio-mesenquimal: SLUG, STAT3, ZEB1 e ZEB2. Após, nós selecionamos duas dessas amostras (CC-20E e CL-28E), que apresentavam morfologia típica de células epiteliais e baixa expressão dos fatores de transcrição citados acima e expressamos de maneira exógena e de forma estável os fatores de transcrição SLUG e ZEB1, através do processo de transdução lentiviral. Entretanto, apenas a transdução com os plasmídeos contendo a região codificante de SLUG foi eficiente. Sendo assim, nós avaliamos os efeitos da expressão exógena de SLUG nas células CC-20E e CL-28E, quanto a alteração de morfologia e expressão de filamentos intermediários como citoqueratina, vimentina e actina. Além disso, nós avaliamos se a expressão exógena de SLUG poderia regular a expressão de outros genes associados a EMT, além de genes supressores de tumores, alvos de SLUG. Por fim, nós avaliamos se a expressão exógena de SLUG poderia induzir ao fenótipo de CITs, verificando se havia alteração na sensibilidade das células aos quimioterápicos doxorrubicina e paclitaxel, além de avaliar o potencial tumorigênico e de auto-renovação dessas células em cultivos de baixa aderência. A expressão exógena de SLUG nas células CC-20E e CL-28E, não induziu a alterações na morfologia epitelial das células. Entretanto, as células alteraram sua disposição em monocamada no cultivo, formando tipos de túbulos semidiferenciados, característicos do processo de EMT híbrido ou parcial. Além, disso, houve um equilíbrio entre a expressão dos filamentos intermediários de citoqueratina e vimentina nas células, além do aumento na expressão dos genes CDH1 (E-caderina) e CDH2 (N-caderina), resultado que sustentou a indução de EMT parcial. O processo de EMT parcial induziu maior resistência ao quimioterápico paclitaxel, além de potencializar a tumorigenecidade e a capacidade de auto-renovação das células em cultivos de baixa aderência. Sendo assim, no presente estudo, nós obtivemos um cultivo com características que mimetizam as CITs, demonstrando que os processos que induzem esse fenótipo são semelhantes tanto na espécie canina, quanto em humanos, sustentando a hipótese de que neoplasias mamárias caninas podem servir como modelo para o estudo das CITs e, consequentemente, do desenvolvimento neoplásico de tumores sólidos. / Mammary neoplasms present a major challenge for both human and veterinary medicine, due to intertumoral and intratumoral heterogeneity, hindering the search for effective treatments. Recently, researchers has highlighted a population of cells with features very similar to stem cells. Known as Tumor-Initiating Cells (TICs), they are described as the main responsible for chemotherapy failures and tumor recurrence, due to their tumorigenic potential, self-renewal ability and drug resistance. The study of TICs is limited mainly by their difficult isolation owing to specific markers absence, and furthermore, cells lose their phenotype when placed in vitro. Therefore, several studies are seeking for alternatives to enrich this population in regular cultures. One way is based on the epithelial-mesenchymal transition induction through of transcription factors overexpression, such as SNAI1, SLUG, ZEB1 e ZEB2. So, the aim of this study was to overexpresse the SLUG and ZEB1 transcription factors in a cell culture derived from canine mammary carcinomas, evaluate its effects and observe whether these transcription factors would be capable of inducing the TIC phenotype. First, four canine mammary carcinomas cell cultures were analyzed for their morphology and gene expression levels of four transcription factors associated with epithelial-mesenchymal transition: SLUG, STAT3, and ZEB1 ZEB2. After, we selected two samples (CC-20E and CL-28E) with typical morphology of epithelial cells and low expression of the transcription factors mentioned above. We then overexpress, stably, the transcription factors SLUG and ZEB1 by lentiviral transduction, However, only SLUG transduction was efficient. Then, we evaluated the effects of SLUG overexpression in CC-20E and CL-28E cells as the change of morphology, expression of intermediate filaments as cytokeratin, vimentin and actin. In addition, we evaluated whether SLUG overexpression could regulate the expression of other EMT-associated genes as well as tumor suppressor genes, and assessed evaluated the tumorigenic potential and self-renewal of these cells in low adherence cultures. Finally, we assessed whether SLUG overexpression could induce drug resistance through doxorubicin and paclitaxel sensivity assay. The SLUG overexpression did not induce modification in epithelial cell morphology, however, cells changed their arrangement in monolayer culture, inducing the semidifferentiated tubules, typical of hybrid or partial EMT process. In, addition, there was a balanced expression between cytokeratin and vimentin, possibly explained by an increase in CDH1 expression (E-cadherin) and CDH2 (N-cadherin) typical of partial EMT. Furthermore, the partial EMT generated cells presenting paclitaxel resistance, and enhanced the tumorigenic potential and self-renewal capacity of the cells on low adherent plates. Thus, in this study, we obtained a cell culture exhibiting features that mimics the TICs, demonstrating the mechanisms which regulate this phenotype are similar in dogs and humans, supporting the hypothesis that canine mammary carcinomas are a great model for the study of TICs and solid tumors development.