No description available.

Le palmier à huile est la première culture oléagineuse, avec environ 40% de la production mondiale, et son fruit accumule deux huiles de composition très différente dans le mésocarpe et l’amande. Chez les plantes, les acides gras sont assemblés en huile dans le réticulum endoplasmique, ceci par la voie dite de Kennedy à laquelle s’ajoutent des mécanismes d’édition impliquant le métabolisme de la phosphatidylcholine. Nous avons utilisé les outils de la lipidomique pour analyser la variabilité au sein de différentes populations de palmier ainsi que pour caractériser l’accumulation d’huile durant le développement du mésocarpe et de l’amande. Puis, nous avons entrepris de tester, dans le système du double hybride de levure, les interactions entre toutes les enzymes de la voie de Kennedy et celles responsables des mécanismes d’édition, et mis en évidence 241 interactions, dont 132 sont fortes, 73 moyennes et 36 faibles. Ces résultats suggèrent que ces enzymes pourraient s’assembler en complexes supra-moléculaires susceptibles de former des métabolons. Certaines isoformes d’une même enzyme ont des profils d’interaction distincts, ce qui ouvre des perspectives pour de futures recherches. De plus, nous avons caractérisé, par expression fonctionnelle dans un mutant de levure dépourvu de TAG, une acyltransférase présumée (EgWSD1-like) ainsi que les trois formes majeures de diacylglycérol acyltransférases du mésocarpe. EgWSD1-like ne restaure que l’activité de synthèse d’esters de cire dans le mutant, tandis que les trois DGAT complémentent toutes la déficience en TAG du mutant, avec d’apparentes spécificités distinctes vis-à-vis des acides gras. / Oil palm is the highest oil-yielding crop-plant, accounting for approximately 40% of the total world vegetable oil production. The fruit accumulates oil, made of triacylglycerol (TAG) molecules, in both mesocarp and kernel with totally different fatty acid profiles. Fatty acids are assembled into oil through Kennedy pathway in the endoplasmic reticulum, which is complicated by editing processes involving phosphatidylcholine metabolism. To investigate oil assembly in oil palm, we use lipidomics as a tool to analyze different populations of palm to search for TAG structural diversity, and to further characterize changes in lipid content and composition in mesocarp and kernel during fruit ripening. We used yeast two-hybrid system (split ubiquitin) to test protein-protein interactions for almost all the enzymes (32) involved in oil assembly pathway, and we demonstrated 241 interactions, including 132 strong interactions, 73 medium interactions and 36 weak interactions. Our results suggest that all enzymes might assemble into one or several complexes that may form metabolons. In addition, different isoforms of enzymes showed distinct interaction profiles, providing hints for future studies. Moreover, we also characterized the in vivo function of a putative acyltransferase (designated EgWSD1-like) possibly involved in oil assembly and the three major diacylglycerol acyltransferase (DGAT) isoforms of palm mesocarp in the mutant yeast H1246, which is devoid of neutral lipid synthesis. EgWSD1-like only shows wax ester synthase activity in yeast, while three EgDGATs all can restore TAG biosynthesis in yeast with different substrate specificities.

Background: Vitamin D is crucial for skeletal muscle function. 25-hidroxyvitamin D (25(OH)D) has been correlated with skeletal muscle mass and intramyocellular lipid (IMCL) content. The purpose of this study was to understand how calcitriol, the active vitamin D metabolite, directly affects myocellular size and lipid partitioning. Methods: C2C12 myotubes were treated with calcitriol (100nM) or vehicle control for 24 or 96 h. Myotube diameter and protein synthesis rate were measured to determine effects of calcitriol on myocellular size. Intramyocellular triacylglycerol (IMTG), diacylglycerol (DAG), and ceramide content were measured by LC/MS. Expression of genes involved in lipid packaging and lipolysis were measured by RT-PCR. Insulin-stimulated phosphorylated Akt (Thr 308) was determined by western blot. Results: Calcitriol did not affect myocellular size or protein synthesis rate. Calcitriol increased total DAG and ceramides in a sub-species specific manner. Calcitriol increased IMTG area, but did not affect total IMTG content. Calcitriol reduced mRNA content of diglyceride acyltransferase and increased mRNA content of lipid packaging genes. Calcitriol did not negatively affect insulin-stimulated pAkt. Conclusions: These results suggest calcitriol directly alters lipid content and packaging in skeletal muscle cells. Altering the expression of lipid packaging genes and increasing IMCL subspecies content may be mechanisms by which vitamin D improves skeletal muscle function in vivo.

Protein–lipid binding interactions play crucial roles in various physiological and pathological processes, making it very important to study these interactions at the molecular level. However, investigation of these interactions is complicated by several issues, including the inherent complexity of membranes as well as the diverse mechanisms by which proteins interact with the membrane surfaces. As a result, many of these interactions remain poorly characterized. Synthetic probes are useful tools employed for studying protein–lipid binding interactions. This thesis will detail the design and synthesis of metabolically stabilized analogues of various signaling lipids, which mimic the natural species and are not easily modified by enzymes present in biological systems. A modular approach is employed for synthesizing these lipid probes, giving access to a wide range of derivatized lipid probes that can then be used for several studies. Although a wide variety of metabolically stabilized lipid analogues have been synthesized, their activity has not yet been characterized and quantified in detail. So, there is a great need to synthesize biologically active phosphorothioate and phosphonate analogues of various signaling lipids in order to properly characterize and compare the binding affinities and activity of these analogues. Synthesis of metabolically stabilized lipid analogue would take us one step closer towards understanding protein–lipid interactions in biological systems and in trying to find answers to the myriad of questions pertaining to these systems.

Certain membrane lipids are involved in intracellular signalling processes, among them phosphoinositides and diacylglycerol (DAG). They mediate a variety of functions, including the effects of nutrients and neurohormonal stimuli on insulin secretion from pancreatic β-cells. To ensure specificity of the signal, their concentrations are maintained under tight spatial and temporal control. Here, live-cell imaging techniques were employed to investigate spatio-temporal aspects of lipid signalling in the plasma membrane of insulin-secreting β-cells. The concentration of phosphatidylinositol 4-phosphate [PtdIns(4)P] increased after stimulation with glucose or Gq protein-coupled receptor agonists. The glucose effect was Ca2+-dependent, whereas the receptor response was mediated by isoforms of novel protein kinase C (PKC). The increases in PtdIns(4)P were paralleled by lowerings of the phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2] concentration. This relationship was not caused by conversion of PtdIns(4,5)P2 to PtdIns(4)P but rather reflected independent regulation of the two lipids. Stimulation of β-cells with glucose or a high K+ concentration induced pronounced, repetitive increases in plasma-membrane DAG concentration, which were locally restricted and lasted only for a few seconds. This pattern was caused by exocytotic release of ATP, which feedback-activates purinergic P2Y1-receptors and stimulates local phospholipase C-mediated DAG generation. Despite their short durations the DAG spikes triggered local activation of PKC. Novel PKCs were recruited to the plasma membrane both after glucose and muscarinic receptor stimulation. While the glucose-induced translocation was synchronized with DAG spiking, muscarinic stimulation induced sustained elevation of the DAG concentration and stable membrane association of the kinase. Also conventional PKCs translocated to the membrane after glucose and receptor stimulation. The glucose-induced response was complex with sustained membrane association mirroring the cytoplasmic Ca2+ concentration, and superimposed brief recurring translocations caused by DAG. Interruption of the purinergic feedback loop underlying DAG spiking suppressed insulin secretion. Since the DAG spikes reflected exocytosis events, a single-cell secretion assay was established, which allowed continuous recording of secretion dynamics from many cells in parallel over extended periods of time. With this approach it was possible to demonstrate that insulin exerts negative feedback on its own release via a phosphatidylinositol 3,4,5-trisphosphate-dependent mechanism.

No description available.

Soybean (Glycine max (L.) Merr) is the largest oil and protein crop in the world and it is grown for both oil and protein. To address the needs of both the edible oil market and industrial applications of soybean oil, fatty acid modification has been a focus of soybean breeding programs. Natural variation, mutagenesis and genetic engineering have been used to alter the fatty acid profile. Several genes, mostly desaturases, have been associated with altered fatty acid profiles but enzymes in the Kennedy Pathway have yet to be studied as another source of genetic variation for altering the fatty acid profiles. The Kennedy Pathway is also known as the oil producing pathway and consists of four enzymes: glycerol-3-phosphate acyltransferase (G3PAT); lysophosphatidic acid acyltransferase (LPAAT); phosphatidic acid phosphatase (PAP); and diacylglycerol acyltransferase 1 (DGAT1). The starting material for this pathway is glycerol-3-phosphate, which is produced from glycerol by glycerol kinase (GK), and the product of this pathway is triacylglycerol (TAG). The overall objective of this study was to elucidate the role that the Kennedy Pathway plays in determining the fatty acid profile in two ways: (1) sequencing the transcribed region of the genomic genes encoding the enzymes of GK, G3PAT, LPAAT, and DGAT1 in soybean genotypes with altered fatty acid profiles; and (2) studying their expression over seed development, across three growing temperatures. The genetic material for the study consisted of four soybean genotypes with altered fatty acid profile: RG2, RG7, RG10, and SV64-53. Results from sequencing showed that the mutations identified in G3PAT, LPAAT, and DGAT1 in the four soybean genotypes did not explain the differences in the fatty acid profiles. The expression of G3PAT, LPAAT, and DGAT1 over seed development showed that G3PAT had the lowest levels, followed by LPAAT, then DGAT1, across the growing temperatures. The differences in expression among genotypes corresponded to differences in fatty acid accumulation, suggesting that expression rather than genetic mutations in the transcribed region of the genes influenced the fatty acid profile of the genotypes in this study. In conclusion, the enzymes of the Kennedy Pathway appear to contribute to the altered fatty acid profiles observed in the soybean mutant genotypes. / Ontario Ministry of Economic Development and Innovation (formerly Ontario Ministry of Research and Innovation), BioCar Initiative, Grain Farmers of Ontario, SeCan

Lipids are stored in a cell for providing energy. The main advantages of storing lipids over carbohydrates like glycogen is that, lipids yield more energy after oxidation because they represent the highly reduced form of carbon, needs less space and water for storage. Conservation of chemical energy in the form of biologically inert form is by storing molecules like triacylglycerol (TAG) and Steryl esters (SE). Triacylglycerol is the major storage form of energy in all eukaryotic cells. During the periods of nutritional excess and nutritional stress, all organisms like bacteria, yeast, animals, and plants can able to do the critical function of synthesizing the triacylglycerol. TAG is an energy store and a repository of essential and non-essential fatty acids and precursors for phospholipid biosynthesis. TAG synthesis mainly takes place in endoplasmic reticulum in mammals and in plants, it takes place in plastid and mitochondria. Triacylglycerol synthesis discovered by Kennedy starts with glycerol 3- phosphate. Glycerol 3-phosphate gets acylate to form lysophosphatic acid (LPA), which in turn acylate to form phosphatic acid (PA) and the reactions are catalyzed by glycerol 3-phosphate acyltransferase (GPAT) and LPA acyltransferase (LPAT) respectively. PA undergoes phosphorylation by PA phosphatase enzyme to give diacylglycerol (DAG). Further acylation of DAG gives rise to TAG and the reaction is catalyzed by diacylglycerol acyltransferase (DGAT). There are several DGAT classes were identified they are DGAT1, DGAT2, PDAT and bifunctional TAG/wax ester synthase. However all the enzymes involved in Kennedy TAG biosynthetic pathway as well as the enzymes of all different DGAT classes are membrane bound enzymes. Through our studies an another DGAT class that is soluble and cytosolic DGAT was first identified in peanut and also in yeast, Rhodotorula glutinis in which a soluble cytosolic complex itself has been identified. The biosynthesis of triacylglycerol (TAG) occurs in the microsomal membranes of eukaryotes. Here, we report the identification and functional characterization of diacylglycerol acyltransferase (DGAT), a member of the 10 S cytosolic TAG biosynthetic complex (TBC) in R. glutinis. Both a full-length and an N-terminally truncated cDNA clone of a single gene were isolated from R. glutinis. The DGAT activity of the protein encoded by RgDGAT was confirmed in vivo by the heterologous expression of cDNA in a Saccharomyces cerevisiae quadruple mutant (H1246) that is defective in TAG synthesis. RgDGAT overexpression in yeast was found to be capable of acylating diacylglycerol (DAG) in an acyl-CoA-dependent manner. Quadruple mutant yeast cells exhibit growth defects in the presence of oleic acid, but wild-type yeast cells do not. In an in vivo fatty acid supplementation experiment, RgDGAT expression rescued quadruple mutant growth in an oleate-containing medium. We describe a soluble acyl-CoA-dependent DAG acyltransferase from R. glutinis that belongs to the DGAT3 class of enzymes. The study highlights the importance of alternate TAG biosynthetic pathway in oleaginous yeasts. A key step in the triacylglycerol (TAG) biosynthetic pathway is the final acylation of diacylglycerol (DAG) by DAG acyltransferase. In silico analysis has revealed that the DCR (defective in cuticular ridges) (At5g23940) gene has a typical HX4D acyltransferase motif at the N-terminal end and a lipid binding motif VX2GF at the middle of the sequence. To understand the biochemical function, the gene was overexpressed in Escherichia coli, and the purified recombinant protein was found to acylate DAG specifically in an acyl-CoA-dependent manner. Overexpression of At5g23940 in a Saccharomyces cerevisiae quadruple mutant deficient in DAG acyltransferases resulted in TAG accumulation. At5g23940 rescued the growth of this quadruple mutant in the oleate-containing medium, whereas empty vector control did not. Lipid particles were localized in the cytosol of At5g23940-transformed quadruple mutant cells, as observed by oil red O staining. There was an incorporation of 16-hydroxyhexadecanoic acid into TAG in At5g23940-transformed cells of quadruple mutant. Here we report a soluble acyl-CoA-dependent DAG acyltransferase from Arabidopsis thaliana. Taken together, these data suggest that a broad specific DAG acyltransferase may be involved in the cutin as well as in the TAG biosynthesis by supplying hydroxy fatty acid.

Les triglycérides (TG) représentent une réserve énergétique essentielle à de nombreuses cellules. De compositions très variées, ils sont le principal constituant de l’huile destinée à l’alimentation, ou utilisée pour produire différents composés d’intérêt industriel. Les Acyl-CoA : diacylglycérol acyltransférases (DGAT) catalysent l’étape finale et limitante de leur synthèse en incorporant un acide gras sur un diglycéride. Chez les végétaux, il existe trois familles, DGAT1, DGAT2 et DGAT3, ne partageant aucune homologie et pour lesquelles aucune structure n’est connue. Ceci empêche toute amélioration de la qualité des huiles par une approche rationnelle. La contribution des DGAT1 à l’accumulation d’huiles alimentaires a été démontrée. Chez certains végétaux, les DGAT2 ont un rôle prépondérant dans lasynthèse de TG peu communs tels que ceux hydroxylés du ricin permettant de produire des lubrifiants et des bioplastiques. La contribution des DGAT3 à la synthèse des TG reste à déterminer in planta.Nous avons étudié les trois familles de DGAT de la plante modèle Arabidopsis thaliana, appartenant à la famille du colza, ainsi qu’une DGAT1 du palmier à huile, plante de culture industrielle. L’expression en bactéries, en levure modèle ou oléagineuse ainsi que l’étude de lignées de plantes mutantes ont permis de caractériser finement les activités de ces enzymes. La modulation de la composition et du contenu en TG des levures par les DGAT a également démontré l’intérêt de ces enzymes pour la production d’huiles microbiennes à façon. / Triacylglycerols (TAG) are an essential energy storage in many cells. Their composition is diverse; they are the main component of the seed oil for the food industry or used to produce industrial compounds. Acyl-CoA: diacylglycerol acyltransferase (DGAT) catalyze the final and rate-limiting step of TAG synthesis by transferring a fatty acid onto a diacylglycerol. In plants, there are three families, DGAT1, DGAT2 and DGAT3, sharing no homology and of unknown structure. It prevents any improvement of seed oil yield and quality by a rational approach. DGAT1 involvement in edible oil accumulation was demonstrated. In some plants, DGAT2 plays a key role in the synthesis of unusual TAG such as hydroxylated TAG found in castor oil and used to produce lubricants and bioplastics. DGAT3 contribution to TAG biosynthesis has not been demonstrated in planta. We studied three families of DGAT from the model plant Arabidopsis thaliana, belonging to the same family as oilseed rape, and a DGAT1 from oil palm, an industrial crop. DGAT expression in bacteria, yeasts and the study of mutant plant lines allowed us to characterize their activities. The modulation of yeast TAG content and composition induced by DGAT expression demonstrated the value of these enzymes for the production of tailored microbial oils.

No description available.