Universiẗat, Diss., 2000--Göttingen.

<p>Organic-walled microfossils are abundant and taxonomically diverse in Cambrian-Ordovician strata; some are important for biostratigraphy and for the correlation of geological successions. New assemblages of Cambrian-Ordovician acritarchs from Kolguev Island, Arctic Russia and Middle Cambrian ichnofossils of endoliths from Peary Land, North Greenland are studied. Twenty-seven acritarch species are described in detail and 10 taxa are left under open nomenclature. The diagnosis of one genus is restricted, and two other are emended. New combinations are proposed for three species and one new species is recognised. The studied acritarch assemblages are taxonomically rich and age-diagnostic and used to recognise Upper Cambrian and Tremadoc strata on Kolguev Island. The sedimentologically continuous successions provide for the first time palaeontological evidence of Cambrian strata in the north-eastern sector of Europe. The exact level of the Cambrian-Ordovician boundary was distinguished together with stratigraphic intervals equivalent to the <i>Peltura</i> and <i>Acerocare</i> zones of the Upper Cambrian of Baltica. The newly established relative age of the lowermost sedimentary succession overlying the Timanian unconformity allows verification of the minimum age of the Timanian deformation and the time-span of the hiatus bound to this unconformity. Endoliths occur in the fossil record from the Early Archean and they played an important role in the formation of stromatolites and the process of bioerosion and biodegradation. Endoliths that have actively bored into brachiopod shells or carbonate grains (euendoliths), and some that inhabited the cavities inside brachiopod shells (cryptoendoliths) are described. Borings within the carbonate grains extended with a dentritic pattern, whereas those within the brachiopod shells were formed by a multifilamentous euendolith which produced characteristic longitudinally ridged galleries. The cryptoendolithic morphologies include indeterminate coccoid masses and at least two filamentous forms. However, considerable variation in the dimensions of the currently phosphatised diagenetic crusts of the cryptoendoliths hinders discrimination.</p>

Organic-walled microfossils are abundant and taxonomically diverse in Cambrian-Ordovician strata; some are important for biostratigraphy and for the correlation of geological successions. New assemblages of Cambrian-Ordovician acritarchs from Kolguev Island, Arctic Russia and Middle Cambrian ichnofossils of endoliths from Peary Land, North Greenland are studied. Twenty-seven acritarch species are described in detail and 10 taxa are left under open nomenclature. The diagnosis of one genus is restricted, and two other are emended. New combinations are proposed for three species and one new species is recognised. The studied acritarch assemblages are taxonomically rich and age-diagnostic and used to recognise Upper Cambrian and Tremadoc strata on Kolguev Island. The sedimentologically continuous successions provide for the first time palaeontological evidence of Cambrian strata in the north-eastern sector of Europe. The exact level of the Cambrian-Ordovician boundary was distinguished together with stratigraphic intervals equivalent to the Peltura and Acerocare zones of the Upper Cambrian of Baltica. The newly established relative age of the lowermost sedimentary succession overlying the Timanian unconformity allows verification of the minimum age of the Timanian deformation and the time-span of the hiatus bound to this unconformity. Endoliths occur in the fossil record from the Early Archean and they played an important role in the formation of stromatolites and the process of bioerosion and biodegradation. Endoliths that have actively bored into brachiopod shells or carbonate grains (euendoliths), and some that inhabited the cavities inside brachiopod shells (cryptoendoliths) are described. Borings within the carbonate grains extended with a dentritic pattern, whereas those within the brachiopod shells were formed by a multifilamentous euendolith which produced characteristic longitudinally ridged galleries. The cryptoendolithic morphologies include indeterminate coccoid masses and at least two filamentous forms. However, considerable variation in the dimensions of the currently phosphatised diagenetic crusts of the cryptoendoliths hinders discrimination.

abstract: Euendolithic cyanobacteria have the remarkable ability to actively excavate and grow within certain minerals. Their activity leads to increased erosion of marine and terrestrial carbonates, negatively affecting coral reef and bivalve ecology. Despite their environmental relevance, the boring mechanism has remained elusive and paradoxical, in that cyanobacteria alkalinize their surroundings, typically leading to carbonate precipitation, not dissolution. Thus, euendoliths must rely on unique adaptations to bore. Recent work using the filamentous model euendolith Mastigocoleus testarum strain BC008 indicated that excavation relied on transcellular calcium transport mediated by P-type ATPases, but the phenomenon remained unclear. Here I present evidence that excavation in M. testarum involves an unprecedented set of adaptations. Long-range calcium transport is achieved through the coordinated pumping of multiple cells, orchestrated by the localization of calcium ATPases in a repeating annular pattern, positioned at a single cell pole, adjacent to each cell septum along the filament. Additionally, specialized chlorotic cells that I named calcicytes, differentiate and accumulate calcium at concentrations more than 500 fold those of canonical cells, likely allowing for fast calcium flow at non-toxic concentrations through undifferentiated cells. I also show, using 13C stable isotope tracers and NanoSIMS imaging, that endolithic M. testarum derives most of its carbon from the mineral carbonates it dissolves, the first autotroph ever shown to fix mineral carbon, confirming the existence of a direct link between oxidized solid carbon pools and reduced organic pools in the biosphere. Finally, using genomic and transcriptomic approaches, I analyze gene expression searching for additional adaptations related to the endolithic lifestyle. A large and diverse set of genes (24% of 6917 genes) were significantly differentially regulated while boring, including several master regulators and genes expectedly needed under this condition (such as transport, nutrient scavenging, oxidative stress, and calcium-binding protein genes). However, I also discovered the up-regulation of several puzzling gene sets involved in alternative carbon fixation pathways, anaerobic metabolism, and some related to photosynthesis and respiration. This transcriptomic data provides us with several new, readily testable hypotheses regarding adaptations to the endolithic lifestyle. In all, my data clearly show that boring organisms show extraordinarily interesting adaptations. / Dissertation/Thesis / Doctoral Dissertation Microbiology 2016