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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Mathematical models for spatial heterogeneity in population dynamics and epidemiology

Lloyd, Alun Lewis January 1996 (has links)
No description available.
2

Spatial distribution and movement of the common shrew (Sorex araneus) and the pygmy shrew (Sorex minutus) in a heterogeneous landscape

Lewis, Alexandra J. G. January 1999 (has links)
No description available.
3

Beyond classical metapopulations: trade-offs and information use in dispersal ecology / Differentielle Energieallokation und informierte Emigration: Eine Erweiterung des Metapopulationskonzeptes

Fronhofer, Emanuel Alexis January 2013 (has links) (PDF)
All animal and plant species must disperse in order to survive. Although this fact may seem trivial, and the importance of the dispersal process is generally accepted, the eco-evolutionary forces influencing dispersal, and the underlying movement elements, are far from being comprehensively understood. Beginning in the 1950s scientists became aware of the central role of dispersal behaviour and landscape connectivity for population viability and species diversity. Subsequently, dispersal has mainly been studied in the context of metapopulations. This has allowed researchers to take into account the landscape level, e.g. for determining conservation measures. However, a majority of theses studies classically did not include dispersal evolution. Yet, it is well known that dispersal is subject to evolution and that this process may occur (very) rapidly, i.e. over short ecological time-scales. Studies that do take dispersal evolution into account, mostly focus on eco-evolutionary forces arising at the level of populations - intra-specific competition or Allee effects, for example - and at the level of landscapes - e.g. connectivity, patch area and fragmentation. Yet, relevant ecological and evolutionary forces can emerge at all levels of biological complexity, from genes and individuals to populations, communities and landscapes. Here, I focus on eco-evolutionary forces arising at the gene- and especially at the individual level. Combining individual-based modelling and empirical field work, I explicitly analyse the influence of mobility trade-offs and information use for dispersal decisions - i.e. individual level factors - during the three phases of dispersal - emigration, transfer and immigration. I additionally take into account gene level factors such as ploidy, sexual reproduction (recombination) and dominance. Mobility-fertility trade-offs may shape evolutionarily stable dispersal strategies and lead to the coexistence of two or more dispersal strategies, i.e. polymorphisms and polyphenisms. This holds true for both dispersal distances (chapter 3) and emigration rates (chapter 4). In sessile organisms - such as trees or corals - maternal investment, i.e. transgenerational trade-offs between maternal fertility and propagule dispersiveness, can be the cause of bimodal and fat-tailed dispersal kernels. However, the coexistence of two or more dispersal strategies may be critically dependent on gene level factors, such as ploidy or dominance (chapter 4). Passively dispersing individuals may realize such multimodal dispersal kernels by mixing different dispersal vectors. Active choice of these vectors allows to optimize the kernel. As most animals have evolved some kind of memory and sensory apparatus - chemical, acoustic or optical sensors - it is obvious that these capacities should be used for dispersal decisions. Chapter 5 explores the use of chemical cues for vector choice in passively dispersed animals. I find that the neotropical phoretic flower mites Spadiseius calyptrogynae non-randomly mix different dispersal vectors, i.e. one short- and one long-distance disperser, in order to achieve fat-tailed dispersal kernels. Such kernels allow an optimal exploitation of patchily distributed habitats. In addition, this strategy increases the probability of successful immigration as the short-distance dispersal vectors show directed dispersal towards suitable habitats. Results from individual-based simulations support and explain my empirical findings. The use of memory and sensory apparatus in dispersal is also the main topic of chapter 6 which strives to bridge the gap between dispersal and movement ecology. In this part of my thesis I develop a model of non-random, memory-based animal movement strategies. Extending the movement ecology paradigm of Nathan (2008a) I postulate that four elements may be relevant for the emergence of efficient movement strategies: perception, memory, inference and anticipation. Movement strategies including these four elements optimize search efficiency at two scales: within patches and between patches. This leads to a significantly increased search efficiency over a comparable area restricted search strategy. These four chapters are completed by a general analysis of metapopulation dynamics (chapter 2). I find that although the metapopulation concept is very popular in theoretical ecology, classical metapopulations can be predicted to be rare in nature, as suggested by lacking empirical evidence. This is especially the case when gene level factors, such as ploidy and sex, are taken into account. In summary, my work analyses the effects of ecological and evolutionary forces arising at the gene- and individual level on the evolution of dispersal and movement strategies. I highlight the importance of including these limiting factors, mechanisms and processes and show how they impact the evolution of dispersal in spatially structured populations. All chapters demonstrate that these forces may have dramatic effects on resulting ecological and evolutionary dynamics. If we intend to understand animal and plant dispersal or movement, it is crucial to include eco-evolutionary forces emerging at all levels of complexity, from genes to communities and landscapes. This endeavour is certainly not purely academic. Particularly nowadays, with rapidly changing landscape structures and anticipated drastic shifts of climatic zones due to global change, dispersal is a factor that cannot be overestimated. / Alle Tier- und Pflanzenarten müssen sich ausbreiten, um ihr Überleben zu sichern. Diese Feststellung mag trivial erscheinen und es wird inzwischen allgemein anerkannt, dass Ausbreitungsverhalten von groß er Relevanz ist. Trotzdem sind wir weit davon entfernt, die öko-evolutionären Kräfte zu verstehen, die Ausbreitungsverhalten und zu Grunde liegende Bewegungsstrategien determinieren. Erst in den 50er Jahren des 20. Jahrhunderts begannen Ökologen die zentrale Rolle von Ausbreitungsverhalten und Konnektivität für die langfristige Überlebensfähigkeit von Populationen sowie für die Entstehung und Aufrechterhaltung von Artenvielfalt zu begreifen. Bis heute wurde Ausbreitungsverhalten vor allem im Kontext von Metapopulationen analysiert. So konnte, über die Untersuchung der Dynamik von lokalen Populationen hinaus, die Landschaftsebene mit einbezogen werden, um beispielsweise effiziente Naturschutzmaßnahmen abzuleiten. Die Evolution von Ausbreitungsverhalten wurde in diesen Studien allerdings traditionellerweise nicht berücksichtigt. Inzwischen ist jedoch zweifelsfrei erwiesen, dass Ausbreitungsverhalten sehr schnell evolvieren kann, wodurch dieser Prozess bereits auf kurzen ökologischen Zeitskalen von Bedeutung ist. Untersuchungen zur Evolution von Ausbreitungsverhalten berücksichtigen aber meist nur öko-evolutionäre Kräfte die auf der Populations- und Landschaftsebene entstehen, wie etwa intra-spezifische Konkurrenz oder Allee Effekte beziehungsweise Konnektivität, Habitatgröße und Fragmentierungsgrad. Es ist jedoch einleuchtend, dass ökologische und evolutionäre Kräfte auf allen Ebenen biologischer Komplexität, von Genen und Individuen über Populationen und Artengemeinschaften bis hin zu Landschaften, entstehen können. In dieser Arbeit möchte ich die Bedeutung von öko-evolutionären Kräften, die speziell auf der individuellen und genetischen Ebene begründet sind, näher beleuchten. Ich verbinde einen individuen-basierten Modellierungsansatz mit empirischer Feldforschung, um den Einfluss von differentieller Energieallokation (“life-history trade-offs'”) und Informationsnutzung für Ausbreitungsentscheidungen während der drei Ausbreitungsphasen - Emigration, Transition und Immigration - zu untersuchen. Zusätzlich berücksichtige ich genetische Mechanismen und Rahmenbedigungen wie Ploidie, sexuelle Reproduktion (Rekombination) und Dominanz. Differentielle Allokation von Energie für Ausbreitungsverhalten und Reproduktion kann evolutionär stabile Ausbreitungsstrategien entscheidend beeinflussen und zur stabilen Koexistenz zweier oder mehrerer Strategien führen, also Polymorphismen und Polyphenismen bedingen. Dies gilt sowohl für Ausbreitungsdistanzen (Kapitel 3) als auch für Ausbreitungsraten (Kapitel 4). In sessilen Organismen, wie beispielsweise Bäumen oder Korallen, kann mütterliche Investition in die Ausbreitungsfähigkeit von Propagulen zu Bimodalität und zu einer Häufung von besonders langen Ausbreitungsdistanzen (“fat tail”) in der evolutionär stabilen Häufigkeitsverteilung der Ausbreitungsdistanzen (“dispersal kernel”) führen. Die stabile Koexistenz zweier oder mehrerer Ausbreitungsstrategien kann jedoch sehr stark von genetischen Faktoren, wie Ploidie oder Dominanz, abhängen. Arten, die sich aufgrund zu geringer Mobilität nicht selbst aktiv ausbreiten können, werden solch bimodale Häufigkeitsverteilungen von Ausbreitungsdistanzen, z.B. durch eine gezielte Mischstrategie mit zwei Vektoren, realisieren. Eine aktive Auswahl der entsprechenden Vektoren ermöglicht es, die resultierende Verteilung der Ausbreitungsdistanzen zu optimieren. Da die meisten Tiere über eine Form von Gedächtnis und sensorischem Apparat verfügen - um chemische, akustische oder optische Reize aufzunehmen und zu verarbeiten - ist es naheliegend, dass diese Fähigkeiten auch für Ausbreitungsentscheidungen genutzt werden. In Kapitel 5 untersuche ich die Nutzung chemischer Signale für die Auswahl von Ausbreitungsvektoren bei Tieren mit passiver Ausbreitung. Ich zeige, dass die neotropischen, phoretischen Blütenmilben der Art Spadiseius calyptrogynae gezielt zwei Ausbreitungsvektoren nutzen - einen Vektor, der v.a. kurze Strecken, und einen, der besonders lange Strecken zurücklegt - und damit, wie oben beschrieben, eine Häufung von groß en Werten in der Häufigkeitsverteilung der Ausbreitungdistanzen (“fat-tailed dispersal kernel”) erzielen. Solche Strategien sind optimal an die Ausbreitung in fragmentierten Habitaten angepasst. Zusätzlich erhöhen diese Blütenmilben durch ihre Vektorwahl die Wahrscheinlichkeit, sich erfolgreich auszubreiten, da einer der beiden Vektoren bevorzugt die Futterpflanze der Milben, also geeignetes Habitat, anfliegt. Diese empirische Studie wird durch eine individuen-basierte Simulation des Systems vervollständigt, deren Ergebnisse die empirischen Befunde erklären und deren Interpretation bestätigen. Die Nutzung von Gedächtnis und sensorischen Kapazitäten steht auch in Kapitel 6 im Vordergrund. In diesem Teil meiner Arbeit entwickle ich ein individuen-basiertes Modell für Bewegungs- und Suchstrategien, das, im Gegensatz zu den meisten Modellen in diesem Bereich, nicht auf Diffusionsprozessen (“random walks”) sondern auf der Nutzung von mentalen und sensorischen Kapazitäten basiert. Ziel ist es, ein mechanistisches Bewegungsmodell im Sinne von Nathan und Kollegen (2008a) zu schaffen und dadurch Ausbreitungs- und Bewegungsökologie zu vereinen. Ich postuliere, dass vier Elemente für die Emergenz von effizienten Bewegungs- und Suchstrategien von zentraler Bedeutung sind: Wahrnehmung, Erinnerung, Inferenz und Antizipation. Suchstrategien, die diese vier Elemente berücksichtigen, sind im Vergleich zu analogen Modellen, die auf Diffusionsprozessen basieren, besonders effizient, da sie ihre Sucheffizienz auf zwei Skalen, nämlich innerhalb und außerhalb von Ressourcenansammlungen, optimieren. Diese vier Kapitel werden durch eine allgemeine Analyse von Metapopulationsdynamiken in Kapitel 2 ergänzt. Hier zeige ich, dass, obwohl sich das Metapopulationskonzept in der theoretischen Ökologie großer Beliebtheit erfreut, klassische Metapopulationsdynamiken in natürlichen Systemen selten zu erwarten sind. Damit bestätigen sich Hinweise empirischer Studien, die seit Längerem berichten, dass klassische Metapopulationen wenig häufig aufzutreten scheinen. Klassische Metapopulationsdynamiken entstehen auch in Modellen besonders selten, wenn diese evolutionäre Faktoren, die auf der Genebene begründet sind, wie Ploidie und Rekombination, berücksichtigen. In der vorliegenden Arbeit analysiere ich die Effekte von ökologischen und evolutionären Kräften, die auf der Gen- und Individuenebene entstehen und evolutionär stabile Ausbreitungs- und Suchstrategien bestimmen. Ich hebe die zentrale Bedeutung dieser Rahmenbedigungen, Mechanismen und Prozesse hervor und zeige, wie sie die Evolution von Ausbreitungsstrategien in räumlich strukturierten Populationen maßgeblich beeinflussen. Aus meiner Arbeit wird unmittelbar ersichtlich, dass die Berücksichtigung öko-evolutionärer Kräfte auf allen Ebenen, von Genen bis hin zu Artengemeinschaften und Landschaften, von zentraler Bedeutung ist, wenn wir Ausbreitungsstrategien von Tieren und Pflanzen verstehen wollen. Dieses Ziel ist über den rein akademischen Bereich hinaus, z.B. auch für den Naturschutz, von großer Relevanz, denn besonders heutzutage, in Anbetracht schneller, anthropogener Veränderungen von Landschaftsstrukturen und des globalen Klimawandels ist die Fähigkeit zur Ausbreitung essentiell.
4

Metapopulation Dynamics and Multi-Scale Habitat Selection of a Montane Forest Songbird

Frey, Sarah 24 June 2008 (has links)
Variations in species occurrence and distribution across the landscape over time provide fundamental information concerning population dynamics. How this relates to habitat characteristics at multiple scales can elucidate the process of habitat selection. I evaluated these processes for a montane fir (Abies) forest specialist, Bicknell’s Thrush (Catharus bicknelli) in Vermont. This species is threatened by a suite of anthropogenic disturbances on its breeding grounds and quantifying the effects of environmental change at the population level for this songbird has not been addressed. The naturally fragmented breeding habitat of varying size, quality, and connectivity warranted a metapopulation approach and a robust occupancy analysis. Detection/non-detection data was collected for Bicknell’s Thrush across 88 sites during the breeding seasons in 2006 and 2007. Local habitat characteristics were measured for each site and landscape-level features were calculated using a predictive habitat model. The six local habitat variables were combined using a principal component analysis. Principal component 1 (PC1) described a gradient of increasing coniferous shrub density and proportion of coniferous dominated forest with decreasing canopy height. The landscape covariate was calculated by dividing patch size by patch isolation creating a continuum of small, isolated patches to large, less isolated patches. Thus each site was characterized by a single local habitat (PC1) and landscape metric. From these data, 67 models considering all combinations of landscape and local habitat scores (univariate, additive and interaction) were evaluated for individual estimates of the following parameters: (1) probability of detection, (2) probability of initial site occupancy, (3) probability of site colonization, and (4) probability of local site extinction. AIC model selection techniques were used to rank the models, which represented ecologically plausible hypotheses that compared the strength of local habitat characteristics to large-scale landscape features. Models within 4 AICc points of the top model were considered plausible. The top eight models were all plausible. Landscape characteristics alone were not significant in driving population dynamics. The relative importance of landscape + local habitat was highest for both probability of initial occupancy and local site extinction. Probability of occupancy increased and extinction decreased with the combination of increased patch size and decreased patch isolation (landscape) and increased coniferous shrub density, proportion of coniferous dominated forest and decreased canopy height (local habitat). Probability of site colonization was driven mainly by local habitat features and increased with increasing habitat quality. These results indicate a complex system with intricate links between landscape and local scales. Preserving large tracts of habitat may not be sufficient in assuring future species persistence, but could minimize local extinction risk. Careful consideration should be given to local habitat features within habitat fragments, particularly to maintain adequate colonization rates. Because important features from both scales are correlated, in intact montane forest patches, landscape-scale attributes alone may serve as a surrogate for identifying quality breeding habitat, assuming processes of natural disturbance can be maintained.
5

Landscape genetics of northern bobwhite and swamp rabbits in Illinois

Berkman, Leah 01 August 2012 (has links)
Northern bobwhite (Colinus virginianus) and swamp rabbits (Sylvilagus aquaticus) are species both strongly influenced by habitat loss and fragmentation in agricultural landscapes. Population declines for the bobwhite and the paucity of information regarding swamp rabbit prevalence add uncertainty to their potential for persistence in Illinois. Research has indicated that these 2 species rarely disperse long distances. In a metapopulation context, such limitations ultimately dictate species' ability to colonize habitat, thereby affecting their persistence. Since gene flow is one of the consequences of dispersal, I employed genetic investigations of the landscape features that affect gene flow, called landscape genetics, to aid the understanding of factors influencing the persistence of the northern bobwhite and swamp rabbit in an agricultural landscape. Tissue samples were collected from hunter harvested bobwhite in central and southern Illinois during 2007-2008. Tissue from trapped swamp rabbits and fecal pellets from swamp rabbit habitat were collected during 2004-2011 in the southernmost counties of Illinois. Microsatellite genetic markers were analyzed for each species. Bayesian clustering methods were used to find interbreeding groups. Levels of gene flow were assessed with F statistics. Correlations between individual genetic distances and landscape features provided an assessment of geographical attributes affecting gene flow. Northern bobwhite expressed less genetic structure among the southern and central counties of Illinois than expected from their sedentary reputation. Genetic differentiation among pre-defined subpopulations was low (FST <0.05) but significant. Genetic clusters were not tightly linked to geography. Individual-based analysis indicated that distance impacted gene flow more than the distribution of suitable habitat or highway barriers. Additionally, the distribution of suitable habitat on the landscape had a negative affect on gene flow indicating bobwhite may disperse through unsuitable habitat more readily than through suitable habitat. These results suggest that greater area of suitable habitat and improvement of existing habitat may be more beneficial to bobwhite than its arrangement or position on the landscape. Significant genetic structure was observed in swamp rabbits in the Cache River watershed of southernmost Illinois. Bayesian clustering indicated 4 distinct genetic groups inhabited the study area. Such structuring suggests swamp rabbits in the northernmost part of their range experience low connectivity among habitat patches and are consequently at risk for extinction in Illinois. Gene flow of swamp rabbits was tied to watercourses indicating their affinity for a water source impacts their dispersal tendencies. Gene flow was negatively impacted by highway barriers, which may interrupt swamp rabbit dispersal due to their avoidance of roads or land cover associated with roads. Alterations to swamp rabbit habitat that leads to loss, increased fragmentation, or increased road density may have severe negative impacts and should be avoided. Habitat improvement focused closer to watercourses may provide a greater benefit for swamp rabbits.
6

Evaluating and Improving Current Metapopulation Theory for Community and Species-level Models

Brown, Natasha A. 02 October 2018 (has links)
No description available.
7

A SYSTEMATIC AND BIOGEOGRAPHIC STUDY OF THE CLAM SHRIMP GENUS EULIMNADIA PACKARD, 1874 (BRANCHIOPODA: SPINICAUDATA: LIMNADIIDAE) AND AN INVESTIGATION INTO THE EVOLUTION AND MAINTENANCE OF ANDRODIOECY IN EULIMNADIA DAHLI DAKIN, 1914

Reed, Sadie Kathleen 17 July 2013 (has links)
No description available.
8

Effects of dispersal on community structure of aquatic insects in Arctic lakes and streams

Khan, Habibur January 2012 (has links)
No description available.
9

Metapopulation Ecology and Recovery of the Endangered Lower Keys Marsh Rabbit

Schmidt, Paige McGee 2009 December 1900 (has links)
The Lower Keys marsh rabbit (LKMR, Sylvilagus palustris hefneri), a subspecies of marsh rabbit endemic to the Lower Keys, Florida, is threatened with extinction due to extensive coastal development of salt marsh habitats. LKMR recovery is limited by habitat loss and degradation from brush encroachment, predation by freeroaming cats (Felis catus) and raccoons (Procyon lotor), sea-level rise, and hurricanes. This study sought to determine local and landscape factors that influence LKMR metapopulation ecology and dynamics and to evaluate strategies for their recovery. I evaluated the influence of patch and landscape characteristics on LKMR densities, extinction, and colonization rates following Hurricane Wilma, and the response of LKMRs and salt marsh habitats to prescribed fire. I used estimates of population change based on annual monitoring data to validate vital rates, constructed a spatially explicit demographic model to evaluate various levels and spatial configurations of recovery scenarios implemented throughout the LKMRs range, and validated expected changes in parameter estimates using measures of habitat degradation and raccoon activity from known LKMR populations. I found LKMR densities were higher in patches with greater numbers of bunchgrasses and forbs and less edge and lower in patches with higher measures of raccoon activity. In response to a hurricane, I found the distance between LKMR patches and the coast had a negative influence on extinction probability; the distance between an extirpated and occupied LKMR patch had a negative influence on colonization probability and patch size had a positive influence. Adult LKMRs increased as woody cover <0.5 m decreased, herbaceous cover <0.5 m increased, and food availability increased in at least one site following prescribed fire. Model results indicated habitat management actions that improve carrying capacity of local rabbit populations and juvenile survival and control raccoon populations to increase rabbit reproductive rates are effective population recovery strategies. In total, my results provide a conservation planning tool that can be used to select recovery strategies and locations that will maximize benefits to LKMRs, thus improving their viability and recovery.
10

A Metapopulation Approach to Recovery of the Five-Lined Skink Using Rehabilitated Aggregate Extraction Sites

Cameron, Melissa 03 March 2009 (has links)
Protecting existing habitat for species-at-risk is an important conservation measure; however, many populations occupy highly fragmented habitat patches to the extent that population persistence is unlikely without the creation of new habitat patches. This research examines the potential for clusters of rehabilitated aggregate extraction sites to be used as reintroduction sites for species-at-risk. Using a method combining GIS and metapopulation modeling, I evaluated the success of establishing metapopulations of the Five-Lined Skink, Eumeces fasciatus, in 137 clusters of aggregate extraction sites using three hypothetical recovery scenarios. Patch abundance and patch clustering had a significant negative effect on metapopulation extinction risk. Increasing the quality of a single patch relative to other patches of suitable quality had little effect on extinction risk and patch occupancy. Introducing all individuals into a single patch decreased extinction risk and patch occupancy. Rehabilitated aggregate sites could play a role in the protection of species-at-risk in Ontario.

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