Spelling suggestions: "subject:"biomolecular films""
91 |
Diffraction studies of structure and growth of films absorbed on the AG(111) surfaceWu, Zhongming, January 1997 (has links)
Thesis (Ph. D.)--University of Missouri-Columbia, 1997. / Typescript. Vita. Includes bibliographical references (leaves 197-202). Also available on the Internet.
|
92 |
Characterisation of surfaces modified through self-assembled monolayers and click chemistryCoates, Megan Patricia January 2013 (has links)
Different approaches to surface modification were investigated in this work on gold, glassy carbon, multi-walled carbon nanotube paper and on single-walled carbon nanotubes adsorbed on glassy carbon. These approaches include electrochemical grafting, electropolymerisation, click chemistry, axial ligation, adsorption and self-assembled monolayers. The modified surfaces were characterised using a variety of techniques; predominantly electrochemistry, scanning electrochemical microscopy and X-ray photoelectron spectroscopy. For the formation of self-assembled monolayers on gold, four new manganese(III) phthalocyanines (1a-d), octa-substituted at the peripheral position with pentylthio, decylthio, benzylthio, and phenylthio groups were synthesized and characterised. X-ray photoelectron spectroscopy was used to show the formation of a sulphur-gold bond. A number of approaches using 4-azidoaniline (2a) combined with azide-alkyne click chemistry and electrochemistry were also used to anchor ferrocene and pyridine moieties on to the carbon surfaces, including direct in situ diazotation and grafting, electropolymerisation, and the synthesis of the diazonium salt followed by grafting. Iron phthalocyanine was linked to the pyridine-clicked surfaces through axial ligation, where the strong axial bond formed by the interaction between the central metal and the lone pair of the nitrogen in the pyridine group resulted in stable modified electrodes. The potential of these surfaces for the detection of analytes such as thiocyanate, hydrazine and sulphite are briefly shown as well. This work also describes for the first time the possibility of performing local micro-electrochemical grafting of a gold substrate by 4-azidobenzenediazonium (2b) using scanning electrochemical microscopy in a single and simple one step approach, without complications from adsorption.
|
93 |
Self-assembled monolayers on silicon : deposition and surface chemistryAdamkiewicz, Malgorzata January 2013 (has links)
Fabrication of surfaces with versatile functional groups is an important research area. Hence, it is essential to control and tune the surface properties in a reliable manner. Vinyl-terminated self-assembled monolayers (SAMs) offer significant flexibility for further chemical modification and can serve as a versatile starting point for tailoring of surface properties. Here a synthetic route for the preparation of vinyl-terminated trichlorosilane self-assembling molecules: 9-decenyltrichlorosilane (CH₂=CH-(CH₂)₈-SiCl₃), 10-undecenyltrichlorosilane (CH₂=CH-(CH₂)₉-SiCl₃), and 14-pentadecenyltrichlorosilane (CH₂=CH-(CH₂)₁₃-SiCl₃) is presented. These molecules were used for the preparation of SAMs in either liquid or vapour phase processes. Commercially available methyl-terminated self-assembling molecules: decyltrichlorosilane (CH₃-(CH₂)₉-SiCl₃) and octadecanetrichlorosilane (CH₃-(CH₂)₁₇-SiCl₃) were used as controls. The resultant films were characterised by X-ray photoelectron spectroscopy (XPS), contact angle analysis, ellipsometry, and atomic force microscopy (AFM). Well defined, vinyl-terminated SAMs were further chemically modified with carbenes (:CCl₂, :CBr₂, :CF₂) and hexafluoroacetone azine (HFAA). The reactions were performed in the liquid or the vapour phase. The resulting SAMs were characterised using the same methods as for the vinyl-terminated monolayers. Successful modification was confirmed by the appearance of new signals in the XPS spectrum, with simultaneous changes in water contact angle values and unchanged thickness values. Methyl-terminated SAMs were also exposed to carbenes and HFAA as a control system. These are the first examples of C-C bond formation on SAMs in the vapour phase.
|
94 |
Morphologie et propriétés élastiques de phases hexatiques dans des films monomoléculaires d'acides grasRivière-Cantin, Sophie 17 January 1995 (has links) (PDF)
Cette thèse présente une étude de films monomoléculaires d'acides gras à l'interface eau-air, principalement par microscopie à l'angle de Brewster. Cette technique permet l'observation directe des coexistences de phases lors de transitions de phases du premier ordre; de plus elle est sensible à l'anisotropie optique des films. La première partie contient une étude du diagramme de phase des acides gras, qui comporte des mésophases analogues aux phases de cristaux liquides smectiques. Nous avons montré que lors des transitions de phases entre phases denses, la texture (l'arrangement moléculaire)des phases est réversible et nous avons obtenu des informations sur l'ordre des transitions. Nous avons aussi mis en évidence, dans deux phases constituées de molécules verticales, une très faible anisotropie optique due à la forme rectangulaire du réseau moléculaire. Nous avons ensuite étudié une film d'acide myristique adsorbé à la surface d'une solution aqueuse d'acide myristique. Nous avons observé des domaines d'une mésophase "inclinée" contenant des lignes de défauts d'orientationmoléculaire présentant des fluctuations thermiques. La mesure de leur amplitude a permis de déterminer la tension de ces lignes. Nous nous sommes aussi intéressés aux constantes élastiques qui gouvernent la forme et la texture à l'équilibre des domaines de mésophase. Nous avons d'une part déterminé la tension de ligne de l'interface entre une phase liquide et une mésophase "inclinée" en étudiant la forme des domaines. Celle-ci résulte de l'équilibre entre la tension de ligne, qui favorise des domaines circulaires, et les interactions répulsives à longue portée entre dipoles moléculaires, qui forment les domaines. Des mesures de potentiel de surface ont permis de calculer l'intensité des forces dipolaires. d'autre part, la texture d'autre domaines de cette mésophaseinclinée nous a renseigné sur la valeur du rapport entre l'élasticité de courbure de la direction moléculaire et l'anisotropie de la tension de ligne.
|
95 |
Microscopie à l'angle de Brewster : transitions de phases et défauts d'orientation dans des films monomoléculairessHénon, Sylvie 11 March 1993 (has links) (PDF)
La microscopie à l'angle de Brewster est une nouvelle et tres puissante technique d'étude des films monomoléculaires à la surface de l'eau. Son principe est basé sur les propriétés de réflectivité des interfaces. Elle est sensible à l'épaisseur, la densité et l'anisotropie optique des films. Cette technique a été appliquée à l'étude de couches adsorbées à la surface de solutions aqueuses d'acides gras (acides palmitiques et myristiques). Ces couches traversent pendant leur formation des transitions de phases. Le nombre, la nature et la morphologie de ces phases dépendent de nombreux paramètres dont le pH. Nous avons entre autres observé des phases optiquement anisotropes, contituées de molécules inclinées par rapport à la normale à la solution.Ces phases sont sans doute des mésophases "verrouillées", c'est à dire que la direction des molécules est fixée par rapport aux directions intermoléculaires. Elles présentent différents types de défauts d'orientation, dont des structures en étoile. L'existence de telles structures est expliquée par application d'un modèle d'élasticité continue développé pour l'étude des films minces de cristaux liquides smectiques. Des structures en zig-zag, en spirales et en bandes de largeur déterminée ont également été observées. Nous avons également étudié les couches d'un polymère (le PDMS) à la surface de l'eau. Nous y avons observé la séparation latérale en domaines de densités de surface différentes, à la fois dans le régime monocouche et le régime multicouches.
|
96 |
Regulating Lipid Organization and Investigating Membrane Protein Properties in Physisorbed Polymer-tethered MembranesSiegel, Amanda P. 07 August 2012 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / Cell membranes have remarkable properties both at the microscopic level and the molecular level. The current research describes the use of physisorbed polymer-grafted lipids in model membranes to investigate some of these properties on both of these length scales. On the microscopic scale, plasma membranes can be thought of as heterogenous thin films. Cell membranes adhered to elastic substrates are capable of sensing substrate/film mismatches and modulating their membrane stiffness to more closely match the substrate. Membrane/substrate mismatch can be modeled by constructing lipopolymer-enriched lipid monolayers with different bending stiffnesses and physisorbing them to rigid substrates which causes buckling. This report describes the use of atomic force microscopy and epimicroscopy to characterize these buckled structures and to illustrate the use of the buckled structures as diffusion barriers in lipid bilayers. In addition, a series of monolayers with varying bending stiffnesses and thicknesses are constructed on rigid substrates to analyze changes in buckling patterns and relate the experimental results to thin film buckling theory.
On the molecular scale, plasma membranes can also be thought of as heterogeneous mixtures of lipids where the specific lipid environment is a crucial factor affecting membrane protein function. Unfortunately, heterogeneities involving cholesterol, labeled lipid rafts, are small and transient in live cells. To address this difficulty, the present work describes a model platform based on polymer-supported lipid bilayers containing stable raft-mimicking domains into which transmembrane proteins are incorporated (αvβ3, and α5β1integrins). This flexible platform enables the use of confocal fluorescence fluctuation spectroscopy to quantitatively probe the effect of cholesterol concentrations and the binding of native ligands (vitronectin and fibronectin for αvβ3, and α5β1) on protein oligomerization state and on domain-specific protein sequestration. In particular, the report shows significant ligand-induced integrin sequestration with a low level of dimerization. Cholesterol concentration increases rate of dimerization, but only moderately. Ligand addition does not affect rate of dimerization in either system. The combined results strongly suggest that ligands induce changes to integrin conformation and/or dynamics without inducing changes in integrin oligomerization state, and in fact these ligand-induce conformational changes impact protein-lipid interactions.
|
97 |
Self-assembly of monolayers of aromatic carboxylic acid molecules on silver and copper modified gold surfaces at the liquid-solid interfaceAitchison, Hannah January 2015 (has links)
Exploiting coordination bonding of aromatic carboxylic acids at metal surfaces, this thesis explores new directions in the design and application of self-assembled monolayers (SAMs). The SAMs are investigated using a multi-technique approach comprising of a complementary combination of scanning tunneling microscopy (STM), X-ray photoelectron spectroscopy (XPS) and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy. In addition, the X-ray standing wave technique (XSW) was used to characterise the substrates. The process of layer formation and the final structures of the SAMs are found to be strikingly dependent on the combination of molecule and substrate, which is discussed in terms of the intermolecular and molecule-substrate interactions, bonding geometries and symmetry of the organic molecules. This is illustrated by the dramatic difference between molecular adsorption on Ag and Cu for molecules such as biphenyl-3,4',5-tricarboxylic acid and biphenyl-4-acetic acid. In the case of self-assembly on Cu, the molecule-substrate interactions play a decisive role in the resulting SAM structure, whereas on Ag, the intermolecular interactions dominate over the weaker molecule-substrate binding. This exploration of the balance of interactions that lead to the formation of these SAM structures lays the foundation for a systematic design of the structures and properties of aromatic carboxylic acid based monolayers. Finally, different applications and properties of some SAMs were investigated, namely coordination of a Pd(II) complex to a pyridine/pyrazole terminated molecule adsorbed on Ag. Evidence of coordination of Pd(II) to single molecules was provided by STM, XPS and NEXAFS spectroscopy. Additionally, controlled STM tip induced modification of local areas of a 1,3,5-tris(4-carboxyphenyl)benzene SAM on Ag was performed, opening an exciting prospect for nanoscale molecular manipulation.
|
98 |
Etude des interactions lipase-lipides au niveau d'interfaces modèles / Study of lipase-lipids interactions using model interfacesBenarouche, Anais 17 December 2013 (has links)
Les enzymes lipolytiques sont solubles en phase aqueuse mais hydrolysent des substrats insolubles. Leurs activités lipolytiques dépendent donc fortement de l’organisation des substrats lipidiques présents sous forme de structures interfaciales telles que des émulsions, des micelles, des liposomes, ou des bicouches lipidiques. Les propriétés cinétiques et la spécificité de substrat de ces enzymes résultent de l’étape initiale d’adsorption à l’interface lipide-eau et des interactions entre le substrat et le site actif. Dans le cadre de ce travail de thèse, la technique des films monomoléculaires a été utilisée pour étudier en détail les étapes séquentielles d’adsorption, de catalyse et d’inhibition de l’enzyme à l’interface lipide-eau. Dans une première partie, nous avons réalisé la caractérisation physico-chimique de la lipase gastrique de chien (DGL), avec l’étude : de son adsorption sur un film non substrat de dilauroylphosphatidylcholine ; ‚ de l’hydrolyse interfaciale de la 1,2-dicaprine dans des films mixtes en présence d’Orlistat. Concernant l’étape de catalyse, nous avons étudié l’effet du propeptide sur la spécificité de substrat et l’activité interfaciale de la phospholipase A2 sécrétée de groupe X de souris. Enfin, dans une troisième partie, nous avons comparé les propriétés interfaciales de la lipase YLLIP2 de la levure Yarrowia lipolytica qui serait un bon candidat pour l’enzymothérapie de substitution chez les patients atteints d’insuffisance pancréatique exocrine (IPE), la lipase pancréatique humaine et la DGL. Nos résultats ont confirmé le rôle d’YLLIP2 en tant qu’excellent « substitut » non seulement de la HPL en cas d’IPE, mais aussi de la DGL. / Lipolytic enzymes are water-soluble whereas their substrates are insoluble in water. Their lipolytic activities depend strongly on the organization of the lipid substrates present in interfacial structures such as oil-in-water emulsions, micelles, liposomes, and membrane bilayers. The kinetic properties and substrate specificity of these enzymes result from both their adsorption at the lipid-water interface, and the interactions occurring between the substrate and the active site. In this thesis work, the monomolecular film technique was used to study in details the sequential steps of adsorption, catalysis and inhibition of model enzymes at the lipid-water interface. In a first part, we performed the physico-chemical characterization of the dog gastric lipase (DGL), by studying: its adsorption onto a dilauroylphosphatidylcholine non-substrate film; ‚ its interfacial hydrolysis of 1,2-dicaprin in mixed films with various amounts of Orlistat. Regarding the catalysis step, we studied the effect of the propeptide on the substrate specificity and interfacial activity of the murine group X secreted phospholipase A2. A model of this enzyme with its propeptide was built from the available 3D structure of the corresponding mature human enzyme. Finally, in the third part, we compared the interfacial kinetic properties of YLLIP2 lipase of the yeast Yarrowia lipolytica which has been identified as a good candidate for enzyme replacement therapy for patients with exocrine pancreatic insufficiency (EPI), human pancreatic lipase and DGL. Our results confirmed the role of YLLIP2 as an excellent "substitute" not only for HPL in case of PEI, but also for the DGL at acidic pH values.
|
Page generated in 0.0733 seconds