The Intensive Cognitive and Communication Rehabilitation program (ICCR), developed to advance young adults with acquired brain injury (ABI) to college, targets a range of cognitive domains (e.g., memory, writing, verbal expression) via classroom-style lectures, individual therapy, and technology- and computer-based interventions on an intensive schedule (i.e., six hours/day, four days/week, 12-week iterations). One of the driving hypotheses of this dissertation work is that cognitive rehabilitation programs that are embedded with principles of experience-dependent neuroplasticity (i.e., repetition, intensity, specificity, salience), like ICCR, should lead to changes in behavior and the brain. The initial two studies of this dissertation focused on the first aspect of this hypothesis (i.e., assessing the impact of ICCR on overall cognitive-linguistic function and specific cognitive domains important for academic success in young adults with ABI), while the final two studies addressed the second aspect (i.e., using fNIRS to measure brain activation during language and domain-general cognitive tasks in neurotypicals and individuals with ABI at a single timepoint and over time). In Study 1, young adults with ABI who participated in ICCR demonstrated significant gains in at least one standardized assessment of global cognitive-linguistic function, while control participants did not. Yet, the study did not reveal what specific cognitive domains important for academic success improved after the ICCR program—an essential intermediate step in evaluating the utility of these programs in preparing young adults with ABI for academic reentry. Study 2 addressed this unanswered question with a novel approach that aggregated items from standardized neuropsychological assessments into specific cognitive domains (e.g., attention, verbal expression, memory) and then, applied growth curve modeling to assess whether those domains improved significantly over time in young adults with ABI participating in the ICCR program. This study also directly compared whether the treatment group improved at a significantly faster rate in overall item accuracy and subdomain item accuracy than a deferred treatment/control usual care group, extending the findings from Study 1 with a larger participant sample. Study 3 was a pilot study using fNIRS to capture brain activation in expected regions during language and domain-general cognitive processing in neurotypicals and individuals with stroke-induced aphasia. Findings from the young healthy control group in this study would serve as a reference for interpreting brain activation patterns in the damaged brain in future work. This study also provided opportunities to determine the acceptability of the fNIRS behavioral tasks and acquisition procedures for individuals with stroke-induced aphasia and to assess the utility of a novel method for managing areas of lesion. Based on the robust findings of Study 1 and 2 (i.e., ICCR promoted gains in overall cognitive domains and specific cognitive processes important for college success) and the promising results of Study 3 (i.e., activation patterns during language and domain-general cognitive processing could be captured in neurotypicals and individuals with brain damage at a single timepoint using fNIRS), Study 4 was undertaken to assess pre- to post-treatment activation changes following ICCR participation via fNIRS. Five young adults with ABI underwent fNIRS measurement while performing the same behavioral task battery used in Study 3 (i.e. semantic feature, picture naming, arithmetic) before and after a 12-week semester of ICCR. This preliminary work provided opportunities 1) to apply fNIRS to measure treatment-related neuroplasticity in the ABI population; 2) to examine the extent to which treatment participants demonstrated changes in the brain following ICCR in conjunction with a positive treatment response and improved behavioral task accuracy; and 3) to identify methodological considerations for future studies in this area. In closing, this dissertation reviews key findings from each of these studies and discusses their implications for studying rehabilitation-induced recovery in adults with ABI in future work. / 2023-08-06T00:00:00Z

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The near ultraviolet absorption spectra of cyclohexanone, cyclohexanone α, α, α', α'd₄ and cyclohexanone d₁₀ have been recorded and analysed under low and high resolution. The vibrational and rotational structure accompanying the electronic singlet-singlet ṉ→π* transition have been analysed. Some complementary information has been obtained from the infrared vapour spectrum of cyclohexanones. The geometries of the ground and first excited state have been determined. In the excited state configuration, the oxygen atom was bent out of the plane of the three adjacent carbon atoms by about 30º, and the carbon oxygen bond increases by 0.08 Å between the ground state and the excited state. Some ring modes are strongly active in the electronic spectra of the three isomers. This may indicate some coupling between the carbonyl group and the ring. The results obtained by band contour analysis are consistent with those obtained by calculation of a double minimum potential function, as well as those obtained in previous work on related molecules. / Thesis / Master of Science (MSc)

Nonlinear optics represents a significant area of research and technology concerned with the modification of material optical properties using light. The interaction between light and such materials gives rise to a multitude of nonlinear optical effects, including second har-monic generation, third harmonic generation, high harmonic generation, and sum frequency generation. This thesis focuses on a specific and relevant nonlinear phenomenon within this field, namely the nonlinear Kerr effect, which involves the modification of a material’s re-fractive index through the exposure to an intense beam of light. The nonlinear Kerr effect holds promise for various applications, such as self-phase modulation in laser technology and the utilization of optical solitons in telecommunications. However, the limited availability of materials with sufficiently strong Kerr effects often restricts the practical application of this effect across different industries. Concurrently, optical time-varying systems play crucial roles in modern technologies, in-cluding optical modulators, LiDAR systems, and adaptive cameras. These systems involve the dynamic modification of optical properties. To achieve ultra-fast modulation of light properties, it is beneficial to explore materials with ultra-fast modulation speeds of the op-tical refractive index for integration into time-varying systems. While electro-optical effects represent the most common methods for achieving high-speed modulation of the effective refractive index, the utilization of all-optical methods, such as the nonlinear Kerr effect, presents an alternative approach. Nevertheless, the absence of simultaneous high speed and large nonlinear Kerr response in the majority of well-established materials restricts the utilization of the Kerr effect in time-varying systems.This thesis focuses on the study of a group of materials known as epsilon-near-zero (ENZ) materials, where the real part of the permittivity vanishes at a specific wavelength referred to as the ENZ wavelength. Specifically, indium-tin-oxide (ITO), a transparent conducting oxide, is investigated, with its ENZ wavelength falling within the infrared region of the elec-tromagnetic spectrum. ITO has been shown to possess a record-breaking large nonlinear Kerr effect with sub-picosecond response times, making it an excellent candidate for all-optical time-varying systems. The primary objective of this research is to investigate the applications of this large, fast nonlinear response and, where possible, enhance its effective-ness. One notable application of rapid and substantial modifications in the refractive index of a material is adiabatic wavelength conversion of light. In one project, a thin layer of ITO is subjected to a pump-probe setup, where an intense pump beam of light triggers the nonlinear response of ITO, causing the refractive index to rapidly change while a probe beam passes through the modulated system. Consequently, the wavelength of the probe beam undergoes conversion. Furthermore, it has been demonstrated that the nonlinear response of ITO can be sig-nificantly enhanced in the presence of a plasmonic metasurface. Metasurfaces consist of two-dimensional arrays of sub-wavelength scattering objects capable of manipulating the vectorial properties of light. In another project, we design a gradient metasurface composed of gold placed over ITO, enabling the diffraction of incident light into various diffraction orders depending on the ratio between the wavelength of light and the periodicity of the metasurface. This unique property is utilized to dynamically steer the diffraction orders of the probe beam, achieving wavelength conversion by exciting the nonlinear response of the ITO substrate with a second pump beam. Additionally, we investigate the interaction of resonance modes in an amorphous silicon metasurface, known as Mie modes, with an inherently dark mode in a thin layer of ITO known as the ENZ mode. Through experimental and analytical approaches, we demonstrate that two fundamental Mie modes, electric dipole resonance and magnetic dipole resonance, can strongly couple with the ENZ mode. This strong coupling creates a highly complex system with a large and rapid nonlinear response, enabling the manipulation of light on sub-picosecond timescales. In our final main project, we delve into investigating the nonlinear response of ITO nanoparticles. To accomplish this, we put forth a numerical recursive approach that allows us to incorporate the significant nonlinear Kerr effect of ITO into inherently linear simulation environments. Subsequently, we employ this proposed method to extract the scattering pattern of sub-wavelength antennas fabricated from ITO in both linear and nonlinear optical regimes. Our objective is to explore the potential applications of ITO nanoantennas in various fields. Moreover, this thesis encompasses other projects related to ENZ materials. We investi-gate the nonlinear response of an artificially created ENZ medium by stacking subsequent layers of materials with negative and positive permittivities within the visible range of the electromagnetic spectrum. Additionally, we explore the nonlinear response of nanoparticles made of ITO. Lastly, we present our investigations into the strong coupling of the ENZ mode in a thin layer of ITO with surface plasmon polaritons in a layer of gold in contact with ITO.

Khirbet Summeily is an early Iron Age II site located northwest of Tell el-Hesi in Southern Israel. Excavations sponsored by the Cobb Institute of Archaeology have revealed a large structure with a potential ritual space dated to the Iron Age IIA (ca. 1000-980/850 B.C.E.). Recent interpretations suggest the site was integrated into a regional economic and political system and functioned as a potential administrative outpost based on the material culture and architecture recovered from the Iron Age IIA layers. This thesis presents the carbon, oxygen, and strontium isotopic analyses of intra-tooth samples from ovicaprine and cattle remains to test herd management strategies in connection to administrative and cultic provisioning activities. The animal remains are used as proxies to identify political and economic ties through herd management patterns. These results will test the hypothesis that Khirbet Summeily was an administrative outpost integrated into a larger political and/or economic network.

Maize, Zea mays L., is the largest cereal grain crop grown in United States. Its yield and grain quality are adversely impacted by diseases every year. Aspergillus ear rot, caused by the fungus Aspergillus flavus, received little interest until its carcinogenic secondary metabolites, aflatoxins, were discovered. The objectives of this study were to introgress the quantitative trait loci (QTL) 2.04 from Mp313E and 5.03 from Mp715 into two commercial inbred lines, MonF and MonM; and evaluate their near isogenic lines (NILs) and testcrosses for preharvest aflatoxin accumulation and secondary agronomic traits. Marker assisted selection to create NILs and the testcross production was conducted by Bayer Company between 2015 and 2018. Field trials were conducted in summer 2019 as randomized complete block trials at three locations. The entry list of inbred trials included two donor parents (DP), two recurrent parents (RP), and their 58 NILs, and that of hybrid trials included 114 NIL testcrosses and 8 parental testcrosses. The top ear of each plant in every plot was inoculated with a 3.4 ml of A.flavus conidial suspension 13 days after mid-silk. All the inoculated ears were harvested at maturity, dried, machine shelled, ground, and aflatoxin concentration was determined by plot. Separate hybrid yield trials were conducted in four locations to measure the grain yield including an additional commercial check. Data on aflatoxin and other secondary traits was analyzed using SAS software. Overall, MonF NILs improved significantly more than MonM NILs in terms of their resistance to aflatoxin accumulation with the introgression of QTL 2.04 from Mp313E, but there were no differences with the introgression of QTL 5.03 from Mp715. Overall, Mp313E NILs improved more than Mp715 NILs when the recurrent parent was MonF, but the response was opposite when the recurrent parent was MonM. Compared to their respective recurrent parents, there were at least two NILs from each of the three out of four RP x DP crosses that significantly improved their resistance to aflatoxin accumulation with a minimal loss of their agronomic performance and testcross grain yields. These NILs could be considered as parents in future introgression projects.

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