Invasive species are a known stressor on aquatic ecosystems, particularly in the waters of the Great Lakes basin. A recent invader, Hemimysis anomala, has had significant impacts on the food webs of Europe, where it invaded previous to its spread to North America. However, despite the fact that Hemimysis is now widespread in the Great Lakes basin, no analysis has been done on the trophic position of Hemimysis in North America invaded sites. This thesis used carbon (??13C) and nitrogen (??15N) stable isotopes to examine spatial and temporal patterns in Hemimysis trophic niche use in invaded North American sites in an attempt to broaden the knowledge base on this invader and to examine potential impacts this invader may have on the food webs of the Great Lakes. A spatial comparison of trophic niche use by Hemimysis among 13 sites in Lake Erie, Lake Ontario, and the St. Lawrence River was conducted between late July and mid-September of 2011. Main sources of carbon (benthic versus pelagic production) and trophic offset, or trophic distance from basal food web items, of Hemimysis were quantified using Hemimysis ??13C and ??15N values. Results indicated that: 1) Hemimysis relied predominantly on pelagic carbon sources at the majority of sites, and isotopic differences between life-stages existed at two of the 13 sites examined, 2) the trophic offset and reliance on pelagic food sources did not differ significantly between lotic and lentic sites, and 3) the isotopic niche width of Hemimysis was spatially heterogeneous, varying by an order of magnitude among sites, but was unrelated to the degree of isotopic variation in the basal food web at each site. Observed ranges in trophic offset and the pelagic fraction of dietary carbon indicate that Hemimysis derives carbon from both benthic and water column sources, as well as at multiple trophic levels. Results support the notion that Hemimysis is an opportunistic omnivore that displays significant dietary flexibility. To test the relative importance of key biotic and abiotic factors, taken from the literature, in driving Hemimysis isotopic variation, a temporal analysis was conducted at two North American sites, one in Lake Ontario and one in the St. Lawrence River, which were repeatedly sampled for Hemimysis and related food web items between September 2008 and January 2012. Seasonal patterns of winter enrichment ??? summer depletion were found in Hemimysis ??15N in Lake Ontario, but a similar pattern was not seen in the St. Lawrence River. Multiple regression models were used to determine the importance of water temperature, Hemimysis C:N ratios, Hemimysis length, and the isotopic values of basal food web components in explaining observed variation in Hemimysis ??13C and ??15N values. Significant relationships were found between Hemimysis isotopic values and water temperature, but relationships with the isotopic signatures of the pelagic basal food web were weak or nonexistent. Hemimysis ??13C values were significantly correlated with C:N ratios. Strong evidence of an ontogenetic dietary shift was found in Lake Ontario, with length showing a significant positive correlation with Hemimysis ??15N. All together the factors included in the models explained little of the observed variation in Hemimysis isotopic values, with approximately 20 % of the observed variation in Hemimysis ??13C, and just under half of Hemimysis ??15N variation, being explained by the included factors. As such, Hemimysis isotopic variation must be explained by factors not included in this study and may include factors such as species composition of the invaded site and availability of prey. Overall, the results of this thesis highlight the opportunistic and flexible nature of Hemimysis diet, and demonstrate the need for future work to determine the main drivers of isotopic variability and trophic niche selection of Hemimysis. The degree of trophic flexibility seen in Hemimysis implies that potential food web impacts will be site specific and heavily reliant on food web dynamics and environmental characteristics of the invaded site.

Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2008.

Spinal cord injury (SCI) leads to axonal damage and limits the ability of the brain to communicate with the rest of the body. Several bioengineered approaches have been developed for the recovery of SCI. Among these techniques, degradable guidance tubes have shown promising results. However, design of nerve guide tubes requires several design considerations and has been a significant challenge. To assess the efficacy of a prototypical implanted nerve guide tubes, it is essential to perform continuous monitoring. In this respect, magnetic resonance imaging (MRI) is one of the most reliable imaging techniques as it offers the ability to achieve extraordinary high temporal and spatial resolution in addition to its non-invasive features. In spite of the excellent image quality of non-enhanced MRI various types of contrast agents have been developed to further enhance the contrast and allow improved visualization. The MRI contrast agents principally work by shortening the T1 or T2 relaxation times of protons located nearby. The presented study was intended to evaluate the in vitro degradation of the nerve guide tubes made of poly (lactic-co-glycolic acid) (PLGA). PLGA tubes incorporated with different concentrations of superparamagnetic iron oxide (SPIO) were scanned by MRI 3T on weekly basis during the degradation period. Spin-echo (SE) sequence with various echo times (TEs) ranged from 13.3 to 314.4 msec was applied. T2 mapping was computed using in-house algorithm developed in Matlab. Least square fit was used to find the slope of the decay curve by plotting log intensity on the y-axis and echo time on the x-axis. The average T2 values were calculated. Mass loss and water uptake of the degrading tubes were also measured weekly. Moreover, the micro-structural changes of the tubes were investigated using the scanning electron microscope (SEM). The MRI results showed that the concentration of SPIO affects the signal intensity of the T2 weighted images reducing the T2 relaxation time value. Accordingly, a linear correlation between SPIO concentration and T2 relaxation time was found. At the beginning of degradation, the SPIO nanoparticles were trapped within the polymeric network. Therefore, water penetration was the predominant factor affecting the T2 relaxation times. At week 5, a significant mass loss was observed. From this stage onwards, the trapped SPIO were released from the polymeric network increasing T2 relaxation time dramatically. According to SEM images, the size of the pores in PLGA guide tubes was increased with the degradation. Approaching the end of degradation, shrinkage of the tubes was observed and the degraded nerve guide tubes were shown to be collapsed. Similar shape variation was observed in T2 weighted MR images. In summary, this study provided an approach to non-invasive monitoring of degradation behavior of nerve guide tubes using contrast enhancement. The developed technique is of great importance since it opened an insight to non-invasive monitoring of tissue engineered scaffolds for in vivo studies.

Elevated intracranial pressure (ICP) in closed head injury may lead to a vegetative state and even death. Current methods available for measuring ICP may cause infection, haemorrhage or not reliable. A patient-specific correlation between ICP and an external vibration response was used for ICP evaluation, which based on finite element (FE) modeling. In FE modeling, a two dimensional FE model of human head was built in ANSYS. Geometry information was obtained from a magnetic resonance image of the human head, while the material properties were acquired from literatures. Vibration responses, e.g., displacement, velocity, acceleration and equivalent strain, were obtained for applied ICPs in FE analyses. Correlations between ICP and vibration responses were established. Effects of impact magnitude and impact duration were studied. Response sensitivity was defined to find a vibration response that is sensitive to ICP change. A procedure based on response sensitivity was proposed for ICP evaluation.

Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2008.

Through a variety of archaeological, historical and geographical techniques, this thesis presents an analysis of the appearance of the landscape of part of southern Northumberland at various points in the past. It also demonstrates the former landuse practices employed within the study area during those past periods, as well as making observation on the contemporary societies employing them. In addition, the techniques and methodologies employed in the creation of this analysis are explored, along with the results of their application.

The herbivory experienced by non-native invasive plants may depend on their local environments, such as herbivore abundance. In this study, I performed a common garden experiment with plants sampled from 11 populations of Arctium minus, from southern Ontario to near its northern range limit. I also compared performance and herbivory of burdock in open and understory habitats. Finally, I conducted freezing tolerance experiments with the lepidopteran seed predator Metzneria lapella, and palatability tests with plants from different populations. Results suggested that the previously described latitudinal trends in herbivore damage among populations are due to environmental differences rather than genotypic differences among populations. At a local scale, plants of open habitat were less damaged and had better performance than understory plants. Burdock has not escaped damage by herbivores in its invaded range; instead variation among sites in herbivore populations and impacts may significantly affect the invasiveness of this species.

The herbivory experienced by non-native invasive plants may depend on their local environments, such as herbivore abundance. In this study, I performed a common garden experiment with plants sampled from 11 populations of Arctium minus, from southern Ontario to near its northern range limit. I also compared performance and herbivory of burdock in open and understory habitats. Finally, I conducted freezing tolerance experiments with the lepidopteran seed predator Metzneria lapella, and palatability tests with plants from different populations. Results suggested that the previously described latitudinal trends in herbivore damage among populations are due to environmental differences rather than genotypic differences among populations. At a local scale, plants of open habitat were less damaged and had better performance than understory plants. Burdock has not escaped damage by herbivores in its invaded range; instead variation among sites in herbivore populations and impacts may significantly affect the invasiveness of this species.

An average of three to five billion tons of ballast water (BW) is transported globally per year; 79 million tons of which is released into U. S. waters. Ballast water is necessary for large ships to maintain balance and stability while loading and unloading cargo as well as during transit. As a ship unloads it’s cargo at a port, it takes on ballast water and then when it loads cargo at the next port, it discharges the ballast water, thus transferring water from port to port. Aquatic organisms are transported around the globe via ballast water. These organisms can potentially cause serious environmental and human health impacts. Historically, transfer of macro-organisms such as fish, snails, and vascular plants via ballast water have been the focus of ballast water research. More recently, microorganisms such as toxin producing dinoflagellates and diatoms i.e. ‘harmful algal blooms’ and pathogenic bacteria (e.g. Vibrio cholerae), have been found to survive in ballast tanks for several weeks. These organisms have moved to the forefront of ballast water management (BWM) trepidations because they compose serious threats to human health as well as Marine Protected Area (MPA) ecosystems such as coral reefs. Ballasting activities of ships calling at the Port of Houston were used as a model for other major ports in U.S. Gulf States. Ballast water management reports, submitted to the U.S. Coast Guard by all overseas vessels calling at the Port of Houston in 2010 were examined for the ballast management strategies utilized prior to docking. Currently, all “coastwise” ships are not required to conduct ballast water exchanges (BWE) if they do not transit beyond the 200nm EEZ. Close inspection of BW management report forms for “overseas” ships determined that the degree of completeness was variable. By comparing the frequency of vessels entering the Port of Houston, ballast water capacities, the management types utilized, and the locations of ballast water exchanges and discharges, it can be concluded that larger vessels present the highest risk of bacterial transfer to coral reefs. Five coral diseases were discovered to be prevalent throughout the ballast management areas their presence has significantly increased in these areas over the past thirty years. The combination of this disease growth along with an increase in shipping and ballast exchanges suggests that the vector at which pathogens are being displaced must lie within the shipping lanes.

Through a holographic recording a property from the third dimension, the depth, is obtained in the form of a phase map of the incident light. One wavelength holography will have a unique phase for the depth range corresponding to the wavelength of the light and outside this range the real depth can not be resolved. By introducing more wavelengths to the measurement the unique phase combination of the waves will have a wider range and larger objects can be resolved. Up to six wavelengths can be simultaneous recorded by making them occupy different spatial frequencies. A set of spatial frequencies together describing a property of the wave is referred to as a lobe. For more than 6 wavelengths and a larger depth range produced by a more seldom repeated unique phase combination the individual waves will occupy the same frequencies, i.e. the lobes overlap. The separation of overlapping lobes is essential in order to make precise and time independent measurements of large and/or moving objects. To separate the lobes the complex fields, i.e. the phases together with the amplitudes, were simulated to propagate a distance and again recorded. The propagation leads to a phase shift of the spatial frequencies which reveals the complex fields in the case of two overlapping wavelengths. For three overlapping wavelengths the resolution, i.e spatial frequencies describing the object, has to be reduced in order to determine the individual complex fields. Since the propagation is a linear transformation for the frequencies that do not overlap, only the overlapping elements whose propagation is nonlinear produce new information. The new information gained is therefore independent of the number of wavelengths used which limits the exact determination of the fields to two wavelengths. Through the holographic recording another property of the complex field is obtained which is the superimposed individual intensities. This bounds the complex fields to certain values, i.e. restricts the possible amplitude of the waves. The recording in the two planes produces two intensity distributions which both must be satisfied by the complex fields. The optimization model for this was formulated and a simple optimization algorithm was implemented. Instead of an equality constraint of the intensities the inequality constraint was implemented, mainly due to that the optimization process was out of the scope of the thesis and the inequality constraint resulted in a simple implementation. The result pointed out important properties even though the optimization could not separate the fields satisfactorily for more than three wavelengths. The inequality constraint contains enough information to solve the case of three overlapping wavelengths.