1. We have successfully developed an efficient approach to 3,4-disubstituted pyridin-2-ones from Glutarimide, and proved to be applicable for the synthesis of mappicine ketone 2. Synthesis of tricyclic lactonedemonstrate the utility Norrish type 1 reaction for the formal synthesis of udotartrial

DNA photosensitizers are compounds that are capable of binding in to DNA strands through groove binding, intercalation, or electrostatic interactions. Excitation of these agents by light generates reactive oxygen species which causes extensive photo-oxidative damage to genomic DNA. Physiological concentrations of NaCl and KCl are ~ 150 mM and 260 mM within the cell nucleus where DNA is contained. Unfortunately, the ability of most photosensitizers to bind to double-helical DNA is reduced and photocleavage yields are diminished as concentrations of salt increase. The aim of this project is to observe the photocleavage of pUC19 plasmid DNA induced by N1,N1-bis(9-anthrymethyl)triethylenetetraamine tetrahydrochloride (AL-VIII 23) 1 or N,N-dimethyl-N’-(9-methylanthracenyl)ethylenediamine (NMEA) 2 in presence of salt. Spectroscopic titrations and DNA melting assays were used to study binding modes and affinities of both dyes to the helix upon the addition of salt.

Metal ions and complexes utilized as cleavage agents have influenced many synthetic approaches of scientists to assist in the cleavage and transformation of biomolecules. These metal-based synthetic cleavage agents have potential applications in biotechnology or as molecular therapeutic agents. Herein, we have examined Ce(IV) metal ion and complexes as acidic hydrolytic agents in lipid hydrolysis reactions (Chapter 2 and 3), and a copper(II) complex that photo-oxidizes DNA upon exposure to ultraviolet light (Chapter 4). In Chapter 2 we examined the hydrolysis of sphingomyelin vesicles by Ce(NH4)2(NO3)6 (Ce(IV)) and compared the results to twelve d- and f-block metal salts, hydrolysis of mixed lipid vesicles and mixed micelles of sphingomyelin by Ce(IV), and hydrolysis of phosphatidylcholine vesicles by Ce(IV), using either MALDI-TOF mass spectrometry or colorimetric assays. In Chapter 3, we described the study of a Ce(IV) complex based on 1,3-bis[tris(hydroxymethyl)methylamino]propane as a potential acidic hydrolytic agent of phospholipids using colorimetric assays and NMR spectroscopy. The hydrolytic agent provided markedly enhance hydrolysis at lysosomal pH (~ 4.8), but suppress hydrolysis when pH was raised to near-neutral pH (~ 7.2). This was due to the pKa values of the donor atoms of the ligand, in which the metal’s electrophilicity was reduced to a greater extent at ~ pH 7.2 compared to ~ pH 4.8. Chapter 4 describes the synthesis and study of a Cu(II) complex based on a hexaazatriphenylene derivative for photo-assisted cleavage of double-helical DNA. Scavenger and chemical assays suggested the formation of DNA damaging reactive oxygen species, hydroxyl and superoxide radicals, and hydrogen peroxide, in the photocleavage reactions. Thermal denaturation and UV-vis absorption studies suggested that the Cu(II) complex binds in a non-intercalative fashion to duplex DNA.

Two-photon absorption is the process in which a molecule absorbs two photons simultaneously. The two key advantages of two-photon processes over one-photon processes are the possibility of excitation of materials with high three-dimensional spatial resolution and deep light-penetration into absorbing materials. Based on bond-cleavage reactions activated by photon-induced intramolecular electron transfer, two-photon activatable acid and radical initiators and two-photon removable protecting groups have been successfully designed and synthesized for photopolymerization and three-dimensional microfabrication and for biomedical photo-triggers. The optical and chemical properties of synthesized molecules, such as quantum yield of acid generation, initiation efficiency of photopolymerization, and photolysis efficiency, have been studied by using a variety of physical and analytical techniques under one-photon conditions. The two-photon characteristics and applications of these molecules are being investigated in collaboration with other groups.

The interaction of small molecules with DNA has been extensively studied and has produced a large catalogue of molecules that non-covalently bind to DNA though groove binding, intercalation, electrostatics, or a combination of these binding modes. Anthracene, acridine, and carbocyanine-based chromophores have been examined for their DNA binding properties and photo-reactivities. Their planar aromatic structures make them ideal chromophores that can be used to probe DNA structural interactions and binding patterns. We have studied DNA binding and photocleavgage properties of a bisacridine chromophore joined by a 2,6-bis(aminomethyl)pyridine copper-binding linker (Chapter II), a series of 9-aminomethyl anthracene chromophores (Chapters III and IV), both under conditions of high and low ionic strength, as well as a series of pentamethine linked symmetrical carbocyanine dyes (Chapter V). In Chapter II we present data showing that high ionic strength efficiently increases copper(II)-dependent photocleavage of plasmid DNA by the bisacridine based chromophore (419 nm, pH 7.0). In Chapters III and IV, using an pyridine N-substituted 9-(aminomethyl)anthracene (Chapter III), a bis-9-(aminomethyl)anthracene, and its mono 9-(aminomethyl)anthracene analogue (Chapter IV), pUC19 plasmid DNA was photo-converted to highly diffuse DNA fragments (350 nm, pH 7.0) in the presence of 150 mM NaCl and 260 mM KCl. Spectroscopic analyses suggest that the combination of salts promotes a change in DNA helical structure that initiate a switch in anthracene binding mode from intercalation to an external or groove binding interactions. The alteration in DNA structure and binding mode leads to an increase in the anthracene-sensitized production of DNA damaging reactive oxygen species. Finally, in Chapter V, pUC19 plasmid DNA is converted to its nicked circular and linear forms following irradiation of a series of pentamethine linked symmetrical carbocyanines (red light, pH 7.0). The data suggest that the relative levels of photocleavage arise from the different substituents on the nitrogen alkyl side chain and the pentamethine linker.

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A series of mixed-metal bimetallic complexes [(TL)2M(dpp)RhCl2(TL)]3 (M = Ru and Os, terminal ligands (TL) = phen, Ph2phen, Me2phen and bpy, terminal ligands (TL) = phen, bpy and Me2bpy ), which couple one Ru or Os polyazine light absorber (LA) to a cis-RhIIICl2 center through a dpp bridging ligand (BL), were synthesized using a building block method. These are related to previously studied trimetallic systems [{(TL)2M(dpp)2RhCl2]5+, but the bimetallics are synthetically more complex to prepare due to the tendency of RhIII halide starting materials to react with diimine ligands to form cis-[Rh(NN)2Cl2]+ motifs. The bimetallic complexes, [(phen)2Ru(dpp)RhCl2(bpy)]3+, [(phen)2Ru(dpp)RhCl2(phen)]3+, [(Ph2phen)2Ru(dpp)RhCl2(phen)]3+, [(Me2phen)2Ru(dpp)RhCl2(phen)]3+, [(bpy)2Ru(dpp)RhCl2(bpy)]3+, [(bpy)2Ru(dpp)RhCl2(Me2bpy)]3+ and [(bpy)2Os(dpp)RhCl2(phen)]3+, were characterized and studied by electrochemistry, electronic absorption spectroscopy, ESI-mass spectrometry, steady-state and time-resolved emission spectroscopy. Ï¿" ï¿" The electrochemical properties of bimetallic complexes with polyazine ligands exhibit a reversible one-electron metal-based oxidation, a quasi-reversible RhIII/IICl2 overlapped with a small amount of RhII/ICl and an irreversible RhII/ICl2 �reductions prior to the reversible bridging ligand dpp0/- �reduction. ï¿" ï¿" The title bimetallic complexes are efficient light absorbers due to the [(TL)2MII(dpp)] light absorber subunit. The bimetallics display ligand-based ï¿"'ï¿"* transitions in the UV region and metal-to-ligand charge transfer (MLCT) transitions in the visible region of the spectrum with approximately half the absorption extinction coefficient values relative to the trimetallics in the spectrum. The Os,Rh bimetallic complex, [(bpy)2Os(dpp)RhCl2(phen)]3+, displays Os(dï¿")'dpp(ï¿"*) CT transition at 521 nm and a low energy absorption band at 750 nm in the near-infrared region representing direct 1GS'3MLCT excitation due to the high degree of spin orbital coupling in Os complexes. The bimetallic complexes [(phen)2Ru(dpp)RhCl2(bpy)]3+, [(phen)2Ru(dpp)RhCl2(phen)]3+, [(Ph2phen)2Ru(dpp)RhCl2(phen)]3+, [(Me2phen)2Ru(dpp)RhCl2(phen)]3+, [(bpy)2Ru(dpp)RhCl2(bpy)]3+ and [(bpy)2Ru(dpp)RhCl2(Me2bpy)]3+ display Ru(dï¿")'dpp(ï¿"*) MLCT transitions centered at 505, 508, 515, 516, 510 and 506 nm, respectively. The bimetallic complex [(Ph2phen)2Ru(dpp)RhCl2(phen)]3+ displays enhanced absorption. Ï¿" ï¿" The photophysical properties of Ru,Rh bimetallic complexes are close to those of trimetallic analogues. In room temperature acetonitrile, both bimetallic and trimetallic complexes display a weak and short-lived emission from the Ru(dï¿")'dpp(ï¿"*) 3MLCT excited state. For example, the bimetallic complex [(phen)2Ru(dpp)RhCl2(bpy)]3+ emits at 766 nm and the trimetallic complex [{(phen)2Ru(dpp)}2RhCl2]5+ emits at 760 nm. At 77 K in 4:1 ethanol/methanol glass, the bimetallics, as well as trimetallics, exhibit a more intense blue-shifted emission with a longer lifetime, which is from the same 3MLCT excited state. At 77 K, the low temperature emission from the same 3MLCT state of [{(phen)2Ru(dpp)}2RhCl2]5+ blue-shifts to 706 nm with the emission lifetime of 1.8 ms and the bimetallic [(phen)2Ru(dpp)RhCl2(bpy)]3+ emits at 706 nm (t = 1.8 ms). The Ru,Rh complexes 3MLCT excited states can populate Ru(dï¿")'Rh(ds*) triplet metal-to-metal charge transfer (3MMCT) excited states through intramolecular electron transfer at room temperature, which is impeded in the rigid matrice at 77 K due to the large reorganizational energy and restricted molecular motion. The emission of Os,Rh bimetallic complex [(bpy)2Os(dpp)RhCl2(phen)]3+ could not be detected by our instruments likely due to its expected red-shifted emission which lies outside our detector window. ï¿" ï¿" �The Ru,Rh bimetallics display interesting and efficient photo-reactivity with DNA activated by visible light. The DNA gel shift assay, selective precipitation, ESI-mass spectrometry and polymerase chain reaction (PCR) studies suggest that Ru,Rh bimetallic complexes photobind to DNA following visible light excitation. This reactivity is not observed for analogous Ru,Rh,Ru trimetallics due to the steric protection of the Rh site in that motif. The bimetallic [(TL)2Ru(dpp)RhCl2(TL)]3+ systems can photobind and photocleave DNA through low-lying 3MMCT excited states when excited by the low energy visible light, with or without molecular oxygen. This is unusual but desirable reactivity for photodynamic therapy (PDT) drug development. The Os,Rh bimetallic complex [(bpy)2Os(dpp)RhCl2(phen)]3+ photobinds and photocleaves DNA under red therapeutic light excitation without molecular oxygen, an unprecedented result. Polymerase chain reaction experiments were used to evaluate the impact on DNA amplification of the DNA photo-modification and photo-damage induced by [(bpy)2Os(dpp)RhCl2(phen)]3+ under red light irradiation. Either photobinding or photocleavage induced by red light excitation of [(bpy)2Os(dpp)RhCl2(phen)]3+ on DNA inhibits amplification via PCR methods, a model for in vivo replication. Moreover, significant thermal stability of DNA photo-modification over 90 "C is required for PCR. A red light-activated drug that acts in an oxygen-independent mechanism to impede DNA amplification is unique in this field and desirable for study as a new class of PDT drugs. / Ph. D.