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The Development of a New Cloning Strategy for the Biosynthetic Production of Brush-Forming Poly(Amino Acids)Henderson, Douglas Brian 17 December 2004 (has links)
The design and discovery of new surface-active polymers that self-assemble on solid substrates to form brush layers will have a major impact on numerous applications. Through recombinant DNA technology, there exists the potential to harness a cell's protein synthesis machinery to produce a brush-forming poly(amino acid) (or PAA) with an exactly specified amino acid sequence, thus controlling the polymer's composition at a level unequaled by conventional organic polymer synthesis. The presented work demonstrates the cloning, expression, purification and characterization of de novo-designed PAA's designed to form brush layers on alumina surfaces. Using conventional recombinant DNA methods, the feasibility of producing a PAA consisting of a poly-glutamate block and a poly-proline block was demonstrated. However, the PAA design was limited by the inherent limitations of conventional cloning techniques.
We introduce here the development of a simple and versatile strategy for producing de novo-designed, high molecular weight PAA's using recombinant DNA technology. The basis of this strategy is that small DNA modules encoding for short PAA blocks can be easily inserted directly into a commercially available and unmodified expression vector. The insertions can be made repeatedly until the gene encodes for a polymer of desired molecular weight and composition. Thus, sequential modifications can be made to the PAA without having to re-start the gene assembly process from the beginning, thereby allowing for quick determination of how these changes affect polymer structure and function. The feasibility and simplicity of this method was shown during the production of a PAA, consisting of a long zwitterionic tail block and a short acidic anchor block, designed to form optimal brush layers on alumina surfaces. The success and flexibility of this method indicates that it can be applied for production of de novo-designed polypeptides in general. It is hoped that this method will contribute towards the rapid development of bio-inspired protein-based polymers for a variety of applications.
This dissertation also contains research that aimed to use phage display technology to develop a new liposome-based immunoassay against biological toxins. This work was part of a collaboration effort with the U.S. Department of Defense and Luna Innovations. / Ph. D.
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Design and synthesis of novel bio-nanohybrid materials: catalytic applications in reactions of interest to the fine-chemical/pharmaceutical industriesMiranda Acevedo, Ronald Alexander 13 February 2012 (has links)
Bio-nanohybrid materials based on the combination of biomolecules and inorganic supports are interesting by their versatile applications in regenerative medicine, drug delivery, bio-engineering and catalysis. In that context, understanding of organic/inorganic interactions offers an important key to design new and more complex bio-systems with modified interactions.
In this thesis, amino acids and synthesised poly-amino acids were immobilised in hydrotalcite-like materials under green, controllable and efficient protocols. Additionally, these nanohybrid materials were used as heterogenized catalysts exhibiting high catalytic activity and selectivity in comparison with their counterpart components.
All result data showed that the location and nature of the immobilization had an important role in the final chemical properties; moreover, this novel bio-nanohybrid material exhibited excellent synergistic behaviour which was unique for each material and could be modified according with the reaction requirements.
All novel bio-nanohybrid materials were easily synthesised, recovered and, in some cases, reused without appreciable deactivation. / Materiales bio-nanohíbridos compuestos por la combinación de biomoléculas y soportes inorgánicos son interesantes por sus versátiles aplicaciones en medicina regenerativa, transporte de medicamentos, bio-ingeniería y catálisis. En este contexto, el entendimiento de las interacciones orgánico/inorgánicas ofrece importante información para el diseño de nuevos y más complejos bio-sistemas con interacciones modificadas.
En esta tesis, amino ácidos y poli-amino ácidos sintéticos fueron inmovilizados en materiales tipo hidrotalcita a través de eficientes y controlables protocolos amigables con el medioambiente. Adicionalmente, estos materiales fueron usados como catalizadores heterogeneizados mostrando alta actividad y selectividad en comparación con sus componentes de partida.
En este sentido, la localización y naturaleza de la interacción tuvo un importante rol en las propiedades catalíticas finales; además, estos novedosos materiales mostraron un excelente comportamiento sinérgico el cual fue único y pudo ser modificado de acuerdo a las necesidades en reacción.
Todos los materiales bio-nanohíbirdos fueron sintetizados y recuperados con facilidad del medio de reacción y en algunos casos fueron reutilizados sin desactivación apreciable.
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