Methods for the preparation of novel antifungal saponins have been investigated in order to further explore their medicinal utility and provide the opportunity to synthesize their derivatives. Through this work, several partially protected stereoisomers of Cholestane, Androstane and Spirostane have been prepared which could be used for the synthesis of various saponin derivatives in order to discover novel saponin based antifungal agent. Various mono and disaccharide derivatives of these steroids have been synthesized and evaluated for their antifungal activity against four pathogenic fungal strains. Among the various derivatives maltose derivatives were found to have the best antifungal activity. However there is a need for more extensive SAR studies to discover compounds with better potency. Additionally, the branched oligosaccharide synthesis was explored in two parts. First, these results demonstrated that the central 2,3-branched portion can be synthesized efficiently from a partially protected glucopyranosyl acceptor since the C-2 and C-3 alcohols differ in their reactivity in glycosylation reactions. Second, a tagged sugar based strategy for synthesis of branched oliogosaccharides was developed, and found to be effective for general synthesis of branched oligosaccharides. Microwave assisted synthesis of cyclic imides have been explored this was a key precursor for the synthesis of our tag molecules which were required for synthesis of branched oligosachharides. A comparison of microwave versus conventional methods for synthesis of cyclic imides has been studied. The synthesis of tagged sugars and their selective deprotection to remove tag molecules were successfully explored in order to have proof of concept for its applicability towards synthesis of branched oligosaccharides. Benzylic mono and dibromination was achieved in very high yields using microwave conditions using environmentally friendly solvent in order to avoid use of carcinogenic carbon tetrachloride as solvent for this type of reactions. In addition reaction time was reduced to 30 minutes to 3 hours compared to convention methods, which needed more than 15 hours for the benzylic bromination reaction.

Techn. Univ., Diss., 2006--Darmstadt

Zugl.: Dresden, Techn. Universiẗat, Diss., 2009.

This thesis describes the development of new methods for thepreparation of enantiomerically pure methyl branched alkylcompounds and their use as building blocks in the synthesis ofstereoisomerically pure pheromones of pine sawflies. The high regioselectivity, enantioselectivity and activityof lipases in organic solvent in conjunction withenvironmentally compatible reaction conditions have madelipase-catalysed synthesis an attractive alternative toconventional synthetic methods in organic chemistry. The lipasefromPseudomonas cepacia(PCL) was used in kineticresolutions of primary 2- methylalcohols by acylation of thealcohols with vinyl acetate/vinyl butyrate. For alcoholsstudied, PCL showed moderate enantioselectivity(E= 10-20) towards 3-alkyl- or 3- cycloalkylsubstitutedprimary 2-methylpropanols, whereas 3-aryl-2-methyl-1-propanolswere accepted with high E-values(E&gt;100). Esterification of substituted methylcarboxylic acids withprimary alcohols catalysed byCandida rugosalipase (CRL) was found to be anenantioselective reaction. In general, CRL showed highselectivity towards(S)-2-methylcarboxylic acids(E= 15-70) and also towards(R)-3-methylcarboxylic acids(E= 15-40). For substrates having a double bond located5-6 bonds from the carbonyl moiety a two-fold enhancement ofenantioselectivity value(E-value) was obtained compared to their saturatedanalogues,E≈ 15-25. Furthermore, the enantioselectivity of CRL towards a seriesof 3- to 8-methyldecanoic acids were studied. CRL surprisinglyshowed enantiorecognition for all of these acids within theE-value range of 2.3-68. Interestingly, whereas the lipaseshowed S-preference when the methyl group was situated ateven-numbered carbons, R-preference was observed for thesubstrates with the methyl group at odd-numbered carbons. In order to establish the stereoisomeric composition of thenatural sex pheromone of the pine sawflyMicrodiprion pallipes, all sixteen individual isomers of3,7,11-trimethyl-2-tridecanol (and their propionate esters)found in this species were synthesised in highdiastereoisomeric purities, 95.3-97.6%. The syntheses werebased on six enantiomerically pure building blocks, the fourstereoisomers of 1-lithio-2,6-dimethyloctane and the twoenantiomers ofcis-3,4- dimethyl-g-butyrolactone. <b>Keywords:</b>lipase,Pseudomonas cepacia,Candida rugosa, enantioselective, enantiomeric ratio,primary 2-methylalcohol, substituted-methylcarboxylic acid,pine sawfly,Microdiprion pallipes, sex pheromone,3,7,11-trimethyl-2-tridecanol, stereoisomer.

Fragment-based drug discovery is an emerging process that has gained popularity in recent years. The process starts from small molecules called fragments. One major step in fragment-based drug discovery is fragment screening, which is a strategy to screen libraries of small molecules to find hits. The strategy in theory is more efficient than traditional high-throughput screening that works with larger molecules. As fragments intrinsically possess weak affinity to a target, detection techniques of high sensitivity to affinity are required for fragment screening. Furthermore, the use of different screening methods is necessary to improve the likelihood of success in finding suitable fragments. Since no single method can work for all types of screening, there is a demand for new techniques. The aim of this thesis is to introduce weak affinity chromatography (WAC) as a novel technique for fragment screening. WAC is, as the name suggests, an affinity-based liquid chromatographic technique that separates compounds based on their different weak affinities to an immobilized target. The higher affinity a compound has towards the target, the longer it remains in the separation unit, and this will be expressed as a longer retention time. The affinity measure and ranking of affinity can be achieved by processing the obtained retention times of analyzed compounds. In this thesis, WAC is studied for fragment screening on two platforms. The first system comprised a 24-channel affinity cartridge that works in cooperation with an eight-needle autosampler and 24 parallel UV detector units. The second system was a standard analytical LC-MS platform that is connected to an affinity column, generally called WAC-MS or affinity LC-MS. The evaluation criteria in studying WAC for fragment screening using these platforms were throughput, affinity determination and ranking, specificity, operational platform characteristics and consumption of target protein and sample. The model target proteins were bovine serum albumin for the first platform, thrombin and trypsin for the latter. Screened fragments were either small molecule drugs, a thrombin-directed collection of compounds, or a general-purpose fragment library. To evaluate WAC for early stages of fragment elaboration, diastereomeric mixtures from a thrombin-directed synthesis project were screened. Although both analytical platforms can be used for fragment screening, WAC-MS shows more useful features due to easy access to the screening platform, higher throughput and ability to analyze mixtures. Affinity data from WAC are in good correlation with IC50 values from enzyme assay experiments. The possibility to distinguish specific from non- specific interactions plays an important role in the interpretation of WAC results. In this thesis, this was achieved by inhibiting the active site of the target protein to measure off-site interactions. WAC proves to be a sensitive, robust, moderate in cost and easy to access technique for fragment screening, and can also be useful in the early stages of fragment evolution. In conclusion, this thesis has demonstrated the proof of principle of using WAC as a new tool to monitor affinity and to select hits in fragment-based drug discovery. This thesis has indicated the primary possibilities, advantages as well as the limitations of WAC in fragment screening procedures.  In the future, WAC should be evaluated on other targets and fragment libraries in order to realize more fully the potential of the technology.

<p>This thesis describes the development of new methods for thepreparation of enantiomerically pure methyl branched alkylcompounds and their use as building blocks in the synthesis ofstereoisomerically pure pheromones of pine sawflies.</p><p>The high regioselectivity, enantioselectivity and activityof lipases in organic solvent in conjunction withenvironmentally compatible reaction conditions have madelipase-catalysed synthesis an attractive alternative toconventional synthetic methods in organic chemistry. The lipasefrom<i>Pseudomonas cepacia</i>(PCL) was used in kineticresolutions of primary 2- methylalcohols by acylation of thealcohols with vinyl acetate/vinyl butyrate. For alcoholsstudied, PCL showed moderate enantioselectivity<i>(E</i>= 10-20) towards 3-alkyl- or 3- cycloalkylsubstitutedprimary 2-methylpropanols, whereas 3-aryl-2-methyl-1-propanolswere accepted with high E-values<i>(E</i>>100).</p><p>Esterification of substituted methylcarboxylic acids withprimary alcohols catalysed by<i>Candida rugosa</i>lipase (CRL) was found to be anenantioselective reaction. In general, CRL showed highselectivity towards<i>(</i>S)-2-methylcarboxylic acids<i>(E</i>= 15-70) and also towards<i>(</i>R)-3-methylcarboxylic acids<i>(E</i>= 15-40). For substrates having a double bond located5-6 bonds from the carbonyl moiety a two-fold enhancement ofenantioselectivity value<i>(</i>E-value) was obtained compared to their saturatedanalogues,<i>E</i>≈ 15-25.</p><p>Furthermore, the enantioselectivity of CRL towards a seriesof 3- to 8-methyldecanoic acids were studied. CRL surprisinglyshowed enantiorecognition for all of these acids within theE-value range of 2.3-68. Interestingly, whereas the lipaseshowed S-preference when the methyl group was situated ateven-numbered carbons, R-preference was observed for thesubstrates with the methyl group at odd-numbered carbons.</p><p>In order to establish the stereoisomeric composition of thenatural sex pheromone of the pine sawfly<i>Microdiprion pallipe</i>s, all sixteen individual isomers of3,7,11-trimethyl-2-tridecanol (and their propionate esters)found in this species were synthesised in highdiastereoisomeric purities, 95.3-97.6%. The syntheses werebased on six enantiomerically pure building blocks, the fourstereoisomers of 1-lithio-2,6-dimethyloctane and the twoenantiomers of<i>ci</i>s-3,4- dimethyl-g-butyrolactone.</p><p><b>Keywords:</b>lipase,<i>Pseudomonas cepaci</i>a,<i>Candida rugos</i>a, enantioselective, enantiomeric ratio,primary 2-methylalcohol, substituted-methylcarboxylic acid,pine sawfly,<i>Microdiprion pallipe</i>s, sex pheromone,3,7,11-trimethyl-2-tridecanol, stereoisomer.</p>