Thesis (M.S.)--Oregon State University, 2008. / Printout. Includes bibliographical references. Also available on the World Wide Web.

Thesis (Ph. D.)--University of Missouri-Columbia, 2001. / Typescript. Vita. Includes bibliographical references (leaves 130-137). Also available on the Internet.

Thesis (Ph. D.)--University of Missouri-Columbia, 2001. / Typescript. Vita. Includes bibliographical references (leaves 130-137). Also available on the Internet.

Agriculture is key to New Zealand�s economy with land-use conversions in response to market forces occurring regularly. Recently, high-intensity dairy farming has replaced low-density livestock farming, often degrading surrounding waterways. Of particular concern is that dairy cattle can be a source of the parasite Giardia, which in humans is a common cause of gastrointestinal infection. Thus, this thesis evaluated whether dairy farm conversions posed significant consequences for public health. First I examined the prevalence of Giardia in calves in a rapidly intensifying dairying region of New Zealand. A total of 1190 faecal samples were collected from calves one to seven weeks old during two spring calving seasons and screened by direct immunofluorescent microscopy. Giardia cysts were detected in 31% of samples. To evaluate the potential risk that this environmental source of Giardia posed to the human population, molecular genotyping was used to compare forty Giardia strains isolated from calves with thirty isolates from humans collected in the same region and period. Sequencing the β-giardin gene, Giardia duodenalis assemblages A and B were identified from both hosts, with genotype comparisons revealing substantial overlap of identical genotypes for both assemblages, implying zoonotic transmission. Environmental agencies routinely promote the planting of streamside edges to decrease nonpoint pollution from dairy farms entering waterways. However, current methods for tracking pathogens across farmland and into waterways via surface runoff are limited and typically have been developed using artificially created landscapes. Furthermore, no studies have investigated how Giardia moves across the landscape in farm surface runoff. I developed a field-based tracking method specific for Giardia and used this technique to compare the ability of recently planted vegetation strips with bare soil strips cleared of vegetation at decreasing pathogen concentrations; a typical scenario when planting barriers to reduce waterway contamination. A spike containing a bromide tracer and inactivated Giardia cysts was applied in drip-irrigated surface runoff, with one-minute samples collected from the bottom of the plot. A significant treatment effect was identified for Giardia, with 26% fewer detected in runoff from the planted strip, highlighting the immediate benefit of vegetation planting in removing pathogens. Next I evaluated the effects of four riparian treatments on Giardia runoff: exotic pasture grass and weeds growing in the absence of cattle grazing due to fencing, in comparison to monocultural plantings of three New Zealand native grassland species. Runoff experiments were performed after planting, both prior to and following the main summer growing season. Bromide recovery was high from all four treatments (54 - 99%), with no significant treatment effects. By comparison, Giardia recovery was low (1 - 13%). Prior to summer, two native species reduced Giardia in runoff more than the pasture grass/weed treatment which was almost vegetation-free at this time. After summer, Giardia recoveries were uniformly lower in all treatments. These results demonstrate that after one growing season, fencing waterways produces riparian buffers, via the growth of exotic pasture plants released from grazing, that decrease pathogen concentrations in surface runoff to concentrations indistinguishable from native plantings. Given infectious organisms are known to be in the environment, it is important to assess the risk these pose to human populations. Findings from this research can be used to improve currently available risk-assessment models for Giardia transmission from infected dairy animals via water to humans.

Agriculture is key to New Zealand�s economy with land-use conversions in response to market forces occurring regularly. Recently, high-intensity dairy farming has replaced low-density livestock farming, often degrading surrounding waterways. Of particular concern is that dairy cattle can be a source of the parasite Giardia, which in humans is a common cause of gastrointestinal infection. Thus, this thesis evaluated whether dairy farm conversions posed significant consequences for public health. First I examined the prevalence of Giardia in calves in a rapidly intensifying dairying region of New Zealand. A total of 1190 faecal samples were collected from calves one to seven weeks old during two spring calving seasons and screened by direct immunofluorescent microscopy. Giardia cysts were detected in 31% of samples. To evaluate the potential risk that this environmental source of Giardia posed to the human population, molecular genotyping was used to compare forty Giardia strains isolated from calves with thirty isolates from humans collected in the same region and period. Sequencing the β-giardin gene, Giardia duodenalis assemblages A and B were identified from both hosts, with genotype comparisons revealing substantial overlap of identical genotypes for both assemblages, implying zoonotic transmission. Environmental agencies routinely promote the planting of streamside edges to decrease nonpoint pollution from dairy farms entering waterways. However, current methods for tracking pathogens across farmland and into waterways via surface runoff are limited and typically have been developed using artificially created landscapes. Furthermore, no studies have investigated how Giardia moves across the landscape in farm surface runoff. I developed a field-based tracking method specific for Giardia and used this technique to compare the ability of recently planted vegetation strips with bare soil strips cleared of vegetation at decreasing pathogen concentrations; a typical scenario when planting barriers to reduce waterway contamination. A spike containing a bromide tracer and inactivated Giardia cysts was applied in drip-irrigated surface runoff, with one-minute samples collected from the bottom of the plot. A significant treatment effect was identified for Giardia, with 26% fewer detected in runoff from the planted strip, highlighting the immediate benefit of vegetation planting in removing pathogens. Next I evaluated the effects of four riparian treatments on Giardia runoff: exotic pasture grass and weeds growing in the absence of cattle grazing due to fencing, in comparison to monocultural plantings of three New Zealand native grassland species. Runoff experiments were performed after planting, both prior to and following the main summer growing season. Bromide recovery was high from all four treatments (54 - 99%), with no significant treatment effects. By comparison, Giardia recovery was low (1 - 13%). Prior to summer, two native species reduced Giardia in runoff more than the pasture grass/weed treatment which was almost vegetation-free at this time. After summer, Giardia recoveries were uniformly lower in all treatments. These results demonstrate that after one growing season, fencing waterways produces riparian buffers, via the growth of exotic pasture plants released from grazing, that decrease pathogen concentrations in surface runoff to concentrations indistinguishable from native plantings. Given infectious organisms are known to be in the environment, it is important to assess the risk these pose to human populations. Findings from this research can be used to improve currently available risk-assessment models for Giardia transmission from infected dairy animals via water to humans.