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Mémoire numérisé par la Direction des bibliothèques de l'Université de Montréal.

Techn. Hochsch., Diss., 2001--Aachen.

This thesis documents the development of novel methodologies for access to sulfur-containing compounds, including sulfones, sulfonamides and benzoisothiazoles. <b>Chapter 1</b> provides an overview of the applications and the synthesis of sulfonyl-containing compounds. A comprehensive introduction to the development of sulfur dioxide surrogates and their applications in transition metal-catalysed organic chemistry is given. <b>Chapter 2</b> describes the development of a one-step copper(I)-catalysed sulfonylative Suzuki-Miyaura cross coupling reaction. A wide range of aryl and alkenyl boronic acids are coupled with aryl and alkenyl iodides to give the corresponding sulfones. A two-step one-pot sulfination/derivatisation method was also developed, allowing access to compounds including β-hydroxy sulfones, sulfonamides and sulfonyl fluorides. <b>Chapter 3</b> illustrates a one-step copper(II)-catalysed sulfonamide synthesis using boronic acids, amines and SO2. Various aryl and alkenyl boronic acids as well as amines and anilines are compatible, including active pharmaceutical ingredients such as amoxapine and desloratadine. <b>Chapter 4</b> details an aryne-based selective formation of substituted benzoisothiazoles. Different substitution pattern of the aryne precursor and the thiadiazole are employed, with the target heterocycles being obtained in good to excellent yields. <b>Chapter 5</b> summarises the research and the future work. <b>Chapter 6</b> documents the experimental procedures and data.

Sulfones are useful bioisosteres in drug discovery, and have an unusual ability to engage in binding with both polar and nonpolar regions of target proteins. Despite this, they have seen limited use in drug-screening campaigns, compared with other functional groups. With the goal of generating a library of bicyclo[3.2.1]sulfone-containing molecules to probe biological function, a tandem 1,2-addition/anionic oxy-Cope/1,2-addition reaction proceeding from 3-sulfolene and discovered by previous members of our group was used to prepare highly substituted scaffolds for diversification. Functional group manipulations on this scaffold were partially successful, but ultimately provided limited scope for exploring three-dimensional space. Moving to a less-substituted bicyclo[3.2.1]sulfone scaffold that could be accessed using methodology developed by the Chou group, it was found that a greater range of chemical diversification could be achieved. Using both substrate-directed methods and intrinsic functional group reactivity, about 70% of the skeletal framework was functionalized with high levels of regioselectivity and (in some cases) good levels of diastereoselectivity. Chemoinformatic analysis was performed on our collection of synthesized bicyclo[3.2.1]sulfone-containing molecules, and diverse molecular descriptors were obtained. Collaborations were established with industrial partners and non-profit institutions for the purpose of determining biological properties in medicinally relevant areas. Significantly, each of these partners joined the project with therapeutic expertise in a different field (oncology, neurodegenerative diseases, antimicrobial agents, and skin inflammation), thereby maximizing the chances of finding useful lead compounds for future development. Preliminary biological screening data were obtained, which suggest future potential for sulfone-containing conformationally restricted small molecules to be impactful in therapeutic development. / Graduate

No / Propargylic sulfones can be cis-hydrogenated using commercial zinc powder and ammonium chloride in THF¿water at room temperature, the major products being the corresponding (Z)-allylic sulfones. Other reducible groups (alkene, benzyloxy) are not affected. Allenylsulfones are implicated in one of the possible reaction pathways.

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The Baltic Sea was earlier identified as a highly polluted brackish water body and still is. The high concentrations of polychlorinated biphenyls (PCBs), p,p’-DDT and related compounds led to severe effects on several species in the Baltic region. However, the situation has improved significantly since the 1970’s resulting in lower exposures to a range of pollutants and healthier wildlife populations. Independent of this positive trend there are still new chemicals leaking into the Baltic Sea environment. The objective of this thesis is to improve the knowledge of sulfone containing compounds and pollutant metabolites in wildlife, with special interest in bis(4-chlorophenyl) sulfone (BCPS) distribution, temporal trend and exposure levels, and the methylsulfonyl-PCBs (MeSO2-PCBs). The latter are of particular interest for chiral MeSO2-PCBs. BCPS is used for the production of high temperature polymers and was detected as an environmental contaminant ten years ago. PCBs, p,p’-DDT and related compounds are still of scientific interest. BCPS is biomagnified and especially in the bird guillemot which has levels of up to 2000 ng BCPS/g fat compared to the grey seal with concentrations of about 60 ng/g fat. The seal levels are similar to the herring, the prey of the bird and seal, with concentrations of 30 ng BCPS/g fat. The guillemot concentration of BCPS has been similar over the last 30 years with a minimal, but significant, annual decline of 1.6%. The reason for the slow decline is not yet understood. Also MeSO2-PCBs and 3-MeSO2-DDE show a small decrease over time in guillemot egg (3 and 9%, respectively), which is less then for the parent compounds. This shows that the sulfone metabolites are more persistent than their precursors in the guillemot. Furthermore, all these sulfone containing compounds showed a specific retention to liver comparing different tissues in grey seal. The atropisomers of the chiral MeSO2-PCB were analysed in both the guillemot and the grey seal and showed to occur in a skewed relationship. This is particularly pronounced in seals where one atropisomer of each chiral congener is very dominating. The dominating atropisomers have been identified with an absolute R configuration, in both grey seal and guillemot. An enantioselective metabolism was indicated to occur when experimentally tested by CB-132 in rat. This thesis is stressing the high specificity in wildlife for one atropisomer in the pair of chiral PCB methyl sulfones being PCB metabolites, and the high BCPS concentrations in guillemot hatching in the Baltic proper.

Cysteine proteases are a class of proteolytic enzymes, which are involved in a series of metabolic and catabolic processes, such as protein turnover, digestion, blood coagulation, apoptosis, fertilization and cell differentiation, and the immune response system. The development of novel potent and selective inhibitors for cysteine proteases has therefore gained increasing attention among medicinal chemists. In this thesis we have reported the design, synthesis, and evaluation of several peptidyl inhibitors for clan CA and clan CD cysteine proteases. We have continued the investigation of dipeptidyl vinyl sulfones as potent and selective inhibitors for dipeptidyl peptidase I (DPPI), a lysosomal cysteine protease, which is involved in the processing of intracellular proteases, such as granzymes. We have found that DPPI tolerates negatively charged amino acid residues in the P2 position with inhibition rates of 7,600 M-1s-1. Dipeptidyl vinyl sulfones with positively charged amino acid residues at the P1 position, however, do not inhibit DPPI at all. A second project focused on the epoxidation of the double bond of the vinyl sulfone moiety of the dipeptidyl vinyl sulfones. Instead of epoxidizing the double bond, we found that an isomerization had occurred. The newly formed compounds were determined to be allyl sulfones. We tested this new class of inhibitors with clan CA proteases and obtained inhibition rates of 560 M-1s-1 for Cbz-Leu-Phe-AS-Ph with calpain I. Two new classes of compounds for the clan CD protease S. mansoni legumain were designed, synthesized, and evaluated. Aza-peptidyl epoxides were found to be potent and selective inhibitors of S. mansoni legumain with IC50’s as low as 45 nM. Aza-peptide Michael acceptors were derived from the aza-peptide epoxide design and synthesized in an analogous fashion. The aza-peptide Michael acceptors inhibited S. mansoni legumain with even lower IC50’s, as low as 10 nM. However, the aza-peptide Michael acceptors react with thioalkylating agents contained in the buffer, such as DTT. The rates of degradation were determined spectroscopically, and half-lives of 3 to 20 minutes were measured. This observation gave us insights into the enzymatic mechanism and allowed us to determine the point of attack for the legumain active site cysteine thiol.

The C-5 modified pyrimidine analogues are well-known anticancer and antiviral drugs which underscore further development of novel probes to study their physical, chemical, and biological properties. In my dissertation the syntheses and properties of (β-halo)vinyl sulfone and/or (β-keto)sulfone analogues of C-5 modified pyrimidine have been discussed. In the first part of the dissertion, the synthesis of 5-(β-halo)vinyl sulfones either by transition metal-catalyzed or iodine-mediated halosulfonylation reaction of 5-acetylene pyrimidine nucleosides have been explored. The novel (β-chloro/bromo/iodo)vinyl sulfones efficiently undergo addition-elimination reaction with different nucleophiles such as thiols, amines, amino acid, peptides to provide (β-substituted)vinyl sulfone analogues. The rate of these substitution reactions depends on the nature of halogen atom presents at the β-position and increases with the order of I ≥ Br > Cl. (β-chloro/bromo/iodo)vinyl sulfones possess exclusively E stereochemistry while their β-substitued analogues possess either E (for β–thio analogues) or Z (for β–amino analogue) stereochemistry. It has been observed that the vinylic proton of (β-chloro) or (β-amino)sulfone analogue undergoes exchanges with deuterium in polar protic deutorated solvents. The antiproliferative activities of those analogues have been explored and was found that protected 5-(E)-(1-chloro-2-tosylvinyl)-2'-deoxyuridine inhibited the growth of L1210, CEM and HeLa cells in lower micromolar range. In the second part of the dissertation the syntheses and reactivities of 5-(β-keto) sulfone of pyrimidine nucleosides were investigated. Thus, 5-(β-halovinyl)sulfone of uracil and cytosine nucleosides have been efficiently converted into corresponding 5-(β-keto) sulfone analogues by displacement of halogen with ammonia followed by acid-catalyzed hydrolysis of the resulting (β-amino)sulfone analogues. A number of electrophiles were trapped at the acidic α-carbon of the 5-(β-keto)sulfones by treatment with electrophiles such as methyl, benzyl, or allyl halide in the presence of base. The 5-(α-iodo-β-keto)sulfone analogues of uracil nucleosides have been tested as an alternative substrates to probe the incorporation of nucleophiles at α-carbon. In the third part of the dissertation, the synthesis of 5'-phosphates of 5-(β-chloro) and 5-(β-keto) sulfones of 2'-deoxyuridine and their polymerase-catalyzed incorporation into DNA were evaluated. Thus, 5'-O-phosphorylated analogues have been efficiently incorporated into the DNA by human DNA repair polymerase (pol β) or bacterial polymerase (pol I).