published_or_final_version / Microbiology / Master / Master of Medical Sciences

The need for new anti- TB drugs is increasingly rising because of the resistance of M. tuberculosis to existing drugs. The mycobacterial cell wall serves as an impermeable protective barrier for the bacilli from toxins and chemotherapeutic agents, mainly due to the mycolic acids waxy outer layer. The mycolic acids play an important role in the architecture and physical properties of the mycobacterial cell wall. This study was based on the observed mimicry and association between the host cholesterol and the mycolic acids. This may present yet another way in which the TB bacilli survives by manipulating its host and using some of its components for its survival. The research focused on whether the cholesterol-like molecules on the mycobacterial cell surface can be targeted for effective delivery of anti-mycobacterial agents. In order to exploit the ability of M tuberculosis to accumulate cholesterol or interact with it, a cholesterol¬binding molecule was used for targeting an anti- TB drug to the mycobacterial cell wall or to the cell membrane of infected macrophages. It was observed that the drug does possess anti-mycobacterial activities even though higher concentrations of the compound were required. This supports the idea that the ability of cholesterol to interact with the mycobacterial mycolic acids can be exploited for designing of anti- TB agents. It was also demonstrated in this study that cholesterol has a negative effect on the activity of INH. Thus cholesterol, which is required for entry and survival of M tuberculosis in the host cells, has yet another protective effect on this pathogen. The possible ability of cholesterol to target the same enzyme(s) as INH is another small piece of knowledge to complete the puzzle to understanding the mode of virulence and pathogenesis of this pathogen and develop of new ways to fight the old enemy. / Dissertation (MSc(Biochemistry))--University of Pretoria, 2006. / Biochemistry / unrestricted

Tuberculosis has returned with vengeance mainly due to the resurgence of multi drug resistant strains incurred by non-compliance to the 6-9 months chemotherapy programme. Co-infection with HIV, which disorientates the immune response, has aggravated the situation. This study was built on previous observations that indicated that the major lipid cell wall component of M. tuberculosis, i.e. mycolic acids, a wax that envelopes and protects the bacillus from the hostile host immune system, can be purified and administered to animals for protection against subsequent tuberculosis induction. It was established in this study that mycolic acids pre-treatment can significantly protect mice upon subsequent intranasal infection with M. tuberculosis and that this protection is not attributed so much to the T helper cell immunity, but rather through induction of innate immunity. In the murine AIDS model, innate immunity induced by mycolic acids pre-treatment was not enough to protect the virally immunocompromised mice against subsequent M. tuberculosis infection. Mycolic acids administration in mice did not support tuberculosis chemotherapy to enable shortening of the duration of chemotherapy. In human tuberculosis patients, antibodies to mycolic acids could be measured in a specially adapted configuration of a resonant mirror biosensor. The preliminary investigation opened up the possibility that the prevalence of anti-mycolic acids antibodies in tuberculosis patients may be measured as a surrogate marker for tuberculosis infection. An apparent cross-reactivity between mycolic acids and cholesterol in binding to tuberculosis patient antibodies may provide far reaching insight in the role of the mycolic acids in the cell wall to facilitate infection. This research contributed significantly to the understanding of the host-pathogen interaction in tuberculosis, to open up fresh approaches to improved diagnosis and chemotherapy. / Thesis (DPhil (Biochemistry))--University of Pretoria, 2006. / Biochemistry / unrestricted

Using a mechanism-based approach to drug discovery, efforts have been directed towards developing novel ATP mimics that can act as GS inhibitors. The purine-based systems, adenosine, adenine and allopurinol, were identified as possible scaffolds for potential ATP mimics, while various meta-disubstituted benzenoid compounds, 3-aminobenzonitrile, 3-aminophenol, resorcinol, 3-aminobenzyl alcohol, 3-hydroxybenzoic acid and 3-aminobenzoic acid have been explored as adenine analogues. These compounds were treated with different alkylating and acylating agents. Allylation of all the substrates was achieved using allyl bromide and N-9 alkylation of protected allopurinol was effected using a number of specially prepared Baylis-Hillman adducts. Acylation of the benzenoid precursors with chloroacetyl chloride, acetoxyacetyl chloride, acryloyl chloride and specially prepared 2,3,4,5,6-pentaacetylgluconoyl chloride afforded the corresponding mono- and /or diacylated products in varying yields (4-96%). Elaboration of the alkylated and acylated products has involved the reaction of hydroxy systems with diethyl chloro phosphate and chloro derivatives with triethyl phosphite in Arbuzov-type reactions to afford phosphorylated products. In all cases, products were fully characterized using 1- and 2-D NMR analysis and, where appropriate, high-resolution mass spectrometry. The application of Modgraph and ChemWindow NMR prediction programmes has been explored and the resulting data have been compared with experimental chemical shift assignments to confirm chemical structures and, in some cases, to establish the position of allylation or acylation. Experimental assignments were found to be generally comparable with the Modgraph data, but not always with the ChemWindow values. The docking of selected products in the 'active-site' of GS and their structural homology with ATP, both in their free and bound conformations have been studied using the ACCELERYS Cerius² platform. All the selected ATP mimics exhibit some form of interaction with the 'active-site' residues, and a number of them appear to be promising GS ligands.

This thesis discusses the preparation of a-(o-nitro-p-methylphenylmercapto)-acetophenone by the reaction between acetophenone and o-nitro-p-methylbenzenesulfenyl chloride in boiling chloroform. The use of stannous chloride in glacial acetic acid for the reduction of nitro groups to amino groups was found generally satisfactory in spite of the difficulty often met with in isolating the amino product.

The introduction of the ether linkage into various compounds imparts physiological activity, hence the synthesis of various ether derivatives involving the phenol group seemed to be a possible route to tuberculostatic substances. The compounds reported in this work are to be tested for tuberculostatic properties by Parke, Davis and Company.

Introdução: A tuberculose é uma infecção curável causada pelo Mycobacterium tuberculosis. Requer tratamento prolongado e a combinação de vários fármacos implicando em efeitos colaterais que podem levar pacientes ao abandono do tratamento. Formulações de droga de liberação controlada como nanopartículas, nanoemulsões ou lipossomos têm tido sucesso contra doenças infecciosas. Em especial, brometo de dioctadecildimetilamônio (DODAB) disperso em água pode formar lipossomos ou vesículas grandes (LV) ou fragmentos de bicamada (BF) que podem carrear drogas hidrofóbicas ou hidrofílicas e ademais, podem atuar como microbicidas. Objetivos: determinar atividade do DODAB contra Mycobacterium tuberculosis e M. smegmatis tanto isoladamente como em combinação com duas drogas tuberculostáticas, rifampicina (RIF) e isoniazida (ISO); determinar a incorporação de RIF e ISO em dispersões de DODAB. Material e Métodos: Dispersões de DODAB foram obtidas por vortexação (LV) ou sonicação (BF) e sua interação com as drogas foi avaliada por espectros óticos das drogas, espalhamento de luz dinâmico para medida de distribuição de tamanhos e potencial-zeta e diálise para determinação de incorporação dos fármacos em DODAB LV ou BF. Viabilidade de M. smegmatis ou M. tuberculosis foi determinada por contagem de viáveis em função de concentração de DODAB. Combinações DODAB/droga contra micobactérias foram avaliadas por determinação de concentração inibitória minima (CIM), em µg/ml. Resultados: DODAB mata M. smegmatis a partir de 4 µM de concentração e 1 h de interação e M. tuberculosis, em 100 µM e 120 h de interação. ISO resultou permeável através da bicamada de DODAB em contraste com RIF que adsorveu irreversivelmente nas bicamadas, resultando em 75% de incorporação com 0.1 e 2 mM de droga e DODAB, respectivamente. CIM de RIF contra M. smegmatis foi 32 e, em combinação com 2 de DODAB caiu para 2. Para M. tuberculosis CIM de 0,015 caiu para 0,007 em combinação com 4 DODAB. A combinação foi sinérgica contra M. smegmatis e de ação independente contra M. tuberculosis. / Introduction: Tuberculosis is potentially curable but remains a serious public health problem with large numbers of infected people in several countries. The long time that the patient should receive medication, associated with a large number of adverse effects often cause treatment failure. Nanoparticles, liposomes and emulsions have been used successfully in antibacterial therapy. In particular, dioctadecyldimethylammonium bromide (DODAB) bilayers in form of bilayer fragments (BF) or vesicles (LV) provided adequate environment for solubilization and stabilization of several drugs with an additional advantage: they acted as antimicrobial agents themselves. Objectives: investigation of DODAB bactericidal activity against mycobacteria, determination of entrapment efficiency for rifampicin (RIF) and isoniazid (ISO) in DODAB dispersions and determination of the DODAB/drug activity against Mycobacterium smegmatis and tuberculosis. Material and Methods: DODAB dispersions were obtained by sonication of dioctadecyldimethylammonium bromide (DODAB) synthetic lipid (BF)or by vortexing (LV) the lipid powder in aqueous solution. The physic-chemical characteristics of drugs in DODAB dispersions were determined from optical spectra and dynamic light scattering for evaluating size distribution and zeta-potentials. Drug incorporation in DODAB dispersions was determined from dialysis. Cell viability was determined from plating and colony forming unities (CFU) counting as a function of [DODAB]. Minimal inhibitory concentration (MIC) was obtained for drug or DODAB/drug combinations. Results: DODAB killed M. smegmatis and tuberculosis from 4¨µM (1 h interaction) and 100 µM (120 h interaction), respectively. Rifampicin drug particles above its solubilization limit could be solubilized by BF at 0.5 mM lipid. LV was leaky to ISO whereas RIF could be incorporated in BF or LV bilayer at high percentiles (0.1 mM RIF in 2 mM DODAB BF or LV). MIC for combination DODAB/RIF was 2/2 or 4/0.007 µg/mL whereas synergism index was 0.5 or 1.0 against M. smegmatis or M. tuberculosis, respectively. DODAB and RIF acted synergistically when tested against M. smegmatis.

Introdução: A tuberculose é uma infecção curável causada pelo Mycobacterium tuberculosis. Requer tratamento prolongado e a combinação de vários fármacos implicando em efeitos colaterais que podem levar pacientes ao abandono do tratamento. Formulações de droga de liberação controlada como nanopartículas, nanoemulsões ou lipossomos têm tido sucesso contra doenças infecciosas. Em especial, brometo de dioctadecildimetilamônio (DODAB) disperso em água pode formar lipossomos ou vesículas grandes (LV) ou fragmentos de bicamada (BF) que podem carrear drogas hidrofóbicas ou hidrofílicas e ademais, podem atuar como microbicidas. Objetivos: determinar atividade do DODAB contra Mycobacterium tuberculosis e M. smegmatis tanto isoladamente como em combinação com duas drogas tuberculostáticas, rifampicina (RIF) e isoniazida (ISO); determinar a incorporação de RIF e ISO em dispersões de DODAB. Material e Métodos: Dispersões de DODAB foram obtidas por vortexação (LV) ou sonicação (BF) e sua interação com as drogas foi avaliada por espectros óticos das drogas, espalhamento de luz dinâmico para medida de distribuição de tamanhos e potencial-zeta e diálise para determinação de incorporação dos fármacos em DODAB LV ou BF. Viabilidade de M. smegmatis ou M. tuberculosis foi determinada por contagem de viáveis em função de concentração de DODAB. Combinações DODAB/droga contra micobactérias foram avaliadas por determinação de concentração inibitória minima (CIM), em µg/ml. Resultados: DODAB mata M. smegmatis a partir de 4 µM de concentração e 1 h de interação e M. tuberculosis, em 100 µM e 120 h de interação. ISO resultou permeável através da bicamada de DODAB em contraste com RIF que adsorveu irreversivelmente nas bicamadas, resultando em 75% de incorporação com 0.1 e 2 mM de droga e DODAB, respectivamente. CIM de RIF contra M. smegmatis foi 32 e, em combinação com 2 de DODAB caiu para 2. Para M. tuberculosis CIM de 0,015 caiu para 0,007 em combinação com 4 DODAB. A combinação foi sinérgica contra M. smegmatis e de ação independente contra M. tuberculosis. / Introduction: Tuberculosis is potentially curable but remains a serious public health problem with large numbers of infected people in several countries. The long time that the patient should receive medication, associated with a large number of adverse effects often cause treatment failure. Nanoparticles, liposomes and emulsions have been used successfully in antibacterial therapy. In particular, dioctadecyldimethylammonium bromide (DODAB) bilayers in form of bilayer fragments (BF) or vesicles (LV) provided adequate environment for solubilization and stabilization of several drugs with an additional advantage: they acted as antimicrobial agents themselves. Objectives: investigation of DODAB bactericidal activity against mycobacteria, determination of entrapment efficiency for rifampicin (RIF) and isoniazid (ISO) in DODAB dispersions and determination of the DODAB/drug activity against Mycobacterium smegmatis and tuberculosis. Material and Methods: DODAB dispersions were obtained by sonication of dioctadecyldimethylammonium bromide (DODAB) synthetic lipid (BF)or by vortexing (LV) the lipid powder in aqueous solution. The physic-chemical characteristics of drugs in DODAB dispersions were determined from optical spectra and dynamic light scattering for evaluating size distribution and zeta-potentials. Drug incorporation in DODAB dispersions was determined from dialysis. Cell viability was determined from plating and colony forming unities (CFU) counting as a function of [DODAB]. Minimal inhibitory concentration (MIC) was obtained for drug or DODAB/drug combinations. Results: DODAB killed M. smegmatis and tuberculosis from 4¨µM (1 h interaction) and 100 µM (120 h interaction), respectively. Rifampicin drug particles above its solubilization limit could be solubilized by BF at 0.5 mM lipid. LV was leaky to ISO whereas RIF could be incorporated in BF or LV bilayer at high percentiles (0.1 mM RIF in 2 mM DODAB BF or LV). MIC for combination DODAB/RIF was 2/2 or 4/0.007 µg/mL whereas synergism index was 0.5 or 1.0 against M. smegmatis or M. tuberculosis, respectively. DODAB and RIF acted synergistically when tested against M. smegmatis.

This thesis describes a procedure used to synthesize a-(p-Aminophenylsulfonyl)-p-methylacetophenone, a-(p-aminophenylsulfonyl)-p-bromoacetophenone, and a-(p-aminophenylsulfonyl)-p-methoxyacetophenone for study as possible new anti-tubercular agents.

A permeabilidade através do epitélio intestinal tem se tornado um importante aspecto a ser determinado nas avaliações biofarmacotécnicas envolvendo fármacos e medicamentos. A técnica mais empregada para essa determinação in vitro é aquela que utiliza a cultura de células Caco-2. Entretanto, ainda são discutíveis as condições para a realização desses experimentos, uma vez que a padronização das mesmas é fator fundamental para a confiabilidade dos resultados. Nesta tese, foram avaliadas as condições para realização dos estudos de permeabilidade através de membranas de células Caco-2 para a rifampicina, principal fármaco utilizado no tratamento da tuberculose. Para tanto, foram investigados fatores tais como a citotoxicidade da rifampicina em diferentes concentrações, a influência da concentração do fármaco sobre a permeabilidade, do pH de realização dos experimentos e da presença de proteínas do muco intestinal, além da influência de proteínas plasmáticas. Foi também investigado o potencial indutor da rifampicina sobre a expressão da glicoproteína-P (Pgp) e seu impacto na permeabilidade da própria rifampicina. Os estudos foram desenvolvidos utilizando membranas de células Caco-2 provenientes da American Type Culture Collection (ATCC) cultivadas em placas Transwel®, a quantificação da fração permeada foi por cromatografia líquida de alta eficiência com métodos validados. A análise da indução da expressão da Pgp foi realizada por PCR-RT. Demonstrou-se que as concentrações da rifampicina (10,0; 25,0 e 50,0 µg/mL) não ocasionaram danos às células Caco-2 no estudo de citotoxicidade pela técnica que emprega o sal do brometo de 3-(4,5-dimetil-2-tiazoli)-2,5-difenil-2H-tetrazólio (MTT). As concentrações de rifampicina (5,0; 10,0 e 25,0 µg/mL) não resultaram em valores estatisticamente diferentes de permeabilidade aparente (Papp) em células Caco-2 nas condições do estudo. A rifampicina apresentou valor de Papp significativamente maior em pH 6,8 dentre os valores de pH avaliados (5,8 ; 6,8; 7,4). A presença de muco simulado e de soro fetal bovino não resultou em valores de permeabilidade significativamente distintos do resultado obtido sem a sua adição ao experimento. A expressão da Pgp em células Caco-2 é induzida pela adição da rifampicina (10µg/mL), ocasionando diminuição da sua permeabilidade por mecanismo de efluxo. Pelos resultados de permeabilidade obtidos em todas as condições avaliadas, a rifampicina pode ser considerada um fármaco de alta permeabilidade de acordo com o Sistema de Classificação Biofarmacêutica. / The permeability through the intestinal epithelium has become an important aspect to be determined in evaluations involving drugs and pharmaceutical products. The most common technique for this determination in vitro is one that uses the culture of Caco-2 cells. Nevertheless, the conditions for carrying out such experiments are still questionable, since the standardization of them is essential to the reliability of the results. In this thesis, we evaluate the conditions for the studies of permeability of rifampicin through membranes of Caco-2 cells, the main drug used in the treatment of tuberculosis. To this end, we examined factors such as cytotoxicity of rifampicin at different concentrations, the influence of drug concentration on the permeability, as well as the pH of the experiments, the presence of proteins of intestinal mucus, and the influence of plasma proteins. It was also investigated the potential of rifampicin on the expression of P-glycoprotein (Pgp) and its impact on the permeability of rifampicin itself. The studies were developed using membranes of Caco-2 cells from American Type Culture Collection (ATCC) grown on plates Transwel®, and the quantification of the fraction of drug permeated was obtained by high performance liquid chromatography with validated methods. The analysis of induction of expression of Pgp was performed by RT-PCR. It was demonstrated that the concentrations of rifampicin (10,0; 25,0 and 50,0 µg/mL) did not cause damage to Caco-2 cells in the study of the cytotoxicity technique that uses a bromide salt of 3 - (4,5-dimethyl-2 - thiazol) -2,5-diphenyl-2H-tetrazolium (MTT). The concentrations of rifampicin (5,0; 10,0 and 25,0 &#181g/mL) did not result in statistically different values of apparent permeability (Papp) in Caco-2 cells under the conditions of the study. Rifampicin showed a value of Papp significantly higher at pH 6.8 in comparison with other measured pH values (5,8 and 7,4). The presence of mucus simulated and fetal calf serum did not result in permeability values significantly different from the result obtained without its addition to the experiment. The expression of P-gp in Caco-2 cells is induced by the addition of rifampicin (10 µg/ml), decreasing its permeability by efflux mechanism. Taking into account the results of permeability obtained in all conditions, the rifampicin can be considered a high permeability drug according to the biopharmaceutical classification system.