Thesis (PhD)--Montana State University--Bozeman, 2009. / Typescript. Chairperson, Graduate Committee: Edward E. Schmidt. Includes bibliographical references (leaves 137-183).

Thesis (M. Med. Sc.)--University of Hong Kong, 2002. / Includes bibliographical references (leaves 50-56).

Thesis (Ph. D., Natural Resources)--University of Idaho, June 2007. / Major professor: Edward O. Garton. Includes bibliographical references. Also available online (PDF file) by subscription or by purchasing the individual file.

Thesis (M.Med.Sc.)--University of Hong Kong, 2002. / Includes bibliographical references (leaves 50-56). Also available in print.

Thesis (M.Phil.)--Hong Kong University of Science and Technology, 2005. / Includes bibliographical references (leaves 143-153). Also available in electronic version.

Thesis (Ph. D.)--University of Canterbury, 2008. / Typescript (photocopy). Includes bibliographical references (leaves 192-230).

We report 95 vertebrate taxa (13 fishes, 11 reptiles, 63 birds, 8 mammals) from late Pleistocene bone deposits in Sawmill Sink, Abaco, The Bahamas. The >5,000 fossils were recovered by scuba divers on ledges at depths of 27-35 m below sea level. Of the 95 species, 39 (41%) no longer occur on Abaco (4 reptiles, 31 birds, 4 mammals).We estimate that 17 of the 39 losses (all of them birds) are linked to changes during the Pleistocene-Holocene Transition (PHT) (∼15-9 ka) in climate (becoming more warm and moist), habitat (expansion of broadleaf forest at the expense of pinewoodland), sea level (rising from -80 m to nearly modern levels), and island area (receding from ∼17,000 km2 to 1,214 km2). The remaining 22 losses likely are related to the presence of humans on Abaco for the past 1,000 y. Thus, the late Holocene arrival of people probably depleted more populations than the dramatic physical and biological changes associated with the PHT.

No description available.

Electrical stimulation of the heel or toes evokes short latency polysynaptic reflexes in muscles of the ankle extensor medial gastrocnemius (MG), the ankle flexor tibialis anterior (TA) and the knee flexor biceps femoris (BF), the co-ordinated actions of which form an organized protective withdrawal response. Previous studies in the rabbit have shown that such reflexes are enhanced (sensitized) or inhibited by application of the chemogenic agent mustard oil (MO) to various areas of the body surface in a manner that reinforces the protective function of these responses. The organization of these ‘sensitization fields’ was strictly controlled by supraspinal pathways from the brain. The aim of the present experiments was therefore to extend these studies of the spatial organization of sensitization of withdrawal reflexes into the rat, the species most commonly used in pain research. Patterns of facilitation and inhibition of spinal reflexes were obtained and compared in decerebrate spinalized, decerebrate non-spinal, and Alfaxan- anaesthetized rats by applying mustard oil to sixteen different body locations including sites on the ipsilateral and contralateral hindlimbs as well as other off limb areas such as the snout and tail. It was found that in decerebrate spinalized animals, MO application to ipsilateral hindlimb sites enhanced but never inhibited reflex responses in the limb, whilst MO treatment to off limb sites was without effect. In contrast in anaesthetized animals the prevalent effect of MO was inhibition from treatment sites distributed across the entire animal. Reflexes in animals with an intact spinal cord (decerebrate or anaesthetized) were facilitated or inhibited by MO application to ipsilateral hindlimb sites in a way that resembled the modular organization of reflexes per se and previous sensitization studies in the rabbit. However clear differences were also observed in the effects of MO between the two species, including modulation of the heel-MG extensor response in spinalized animals, which in rabbit was inhibited by MO application to the ipsilateral toes whereas in the rat no inhibition by MO was found in spinalized animals. Sensitization of hindlimb reflexes by MO in the rat therefore seems to be influenced by descending inhibitory and facilitatory pathways. These influences were further investigated in subsequent studies. Whilst the predominant effect of spinalization was a loss of inhibition and an expansion of sensitization fields, in the toes-evoked TA reflex the reverse was noted with regard to MO treatment of distal ipsilateral sites. In this case, facilitation found in non-spinal animals did not occur in the equivalent spinalized cohort, and thereby implies that a descending facilitatory pathway is also implicated in the control of spinal reflex excitability in this model. In decerebrate rats, the noradrenergic α2-adrenoceptor antagonist RX 821002 or the serotonergic 5-HT3 receptor antagonist ondansetron were administered directly to the spinal cord (intrathecally, i.t.) either alone (dose-response studies) or as a single dose between two successive MO applications to one of three ipsilateral skin sites on the hindlimb (heel, metatarsophalangeal joints or flexion of the ankle). Cumulative i.t. doses of RX 821002 revealed the presence of tonic descending inhibition of all reflex responses as well as preventing MO-evoked inhibition (and possibly facilitation) of reflex responses suggesting the involvement of the α2-adrenoceptor subtype in mediating these effects in this model. On the other hand, cumulative i.t. ondansetron administration resulted in a decrease in the magnitude of reflex responses, thus indicating that 5-HT3 receptors are indeed implicated in tonic descending facilitation of spinal reflexes. In addition i.t. ondansetron revealed that potentiation (and possibly inhibition) of reflexes following an acute chemogenic insult appears to involve the actions of serotonin at 5-HT3 receptors in the spinal cord. These studies therefore show that the organization of sensitization of hindlimb reflexes in the rat are modulated by supraspinal influences that exist as a balance of descending facilitatory and inhibitory pathways, mediated at least in part by serotonergic 5-HT3 receptors and noradrenergic α2-adrenoceptors.

The Notch signalling pathway is pivotal in ensuring that the processes of arterial specification, angiogenic sprouting and haematopoietic stem cell (HSC) specification are correctly carried out in the dorsal aorta (DA), a primary arterial blood vessel in developing vertebrate embryos. Using the zebrafish as a model organism, and additional experimental observations from mouse and cell line models to guide mathematical modelling, this thesis aims to better understand the mechanisms involved in the establishment of a healthy vasculature in the growing embryo. We begin by studying arterial and HSC specification in the zebrafish DA. Mathematical models are used to analyse the dose response of arterial and HSC genes to an input Notch signal. The models determine how distinct levels of Notch signalling may be required to establish arterial and HSC identity. Furthermore, we explore how Delta-Notch coupling, which generates salt-and-pepper patterns, may drive the average gene expression levels higher than their homogeneous levels. The models considered here can qualitatively reproduce experimental observations. Using laboratory experiments, I was able to isolate DA cells from transgenic zebrafish embryos and generate temporal gene expression data using qPCR. We show that it is possible to fit ODE models to such data but more reliable data and a greater number of replicates at each time point is required to make further progress. The same VEGF-Delta-Notch signalling pathway is involved in tip cell selection in angiogenic sprouting. Using an ODE model, we rigourously study the dynamics of a VEGF-Delta-Notch feedback loop which is capable of amplifying differences betwen cells to form period-2 spatial patterns of alternating tip and stalk cells. The analysis predicts that the feeback strengths of Delta ligand and VEGFR-2 production dictate the onset of patterning in the same way, irrespective of the parameter values used. This model is extended to incorporate feedback from filopodia, growing in a gradient of extracellular VEGF, which are capable of facilitating tip cell selection by amplifying the resulting patterns. Lastly, we develop a PDE model which is able to properly account for VEGF receptor distributions in the cell membrane and filopodia. Receptors can diffuse and be advected due to domain growth, defined by a constitutive law, in this model. Our analysis and simulations predict that when receptor diffusivity is large, the ODE model for filopodia growth is an excellent approximation to the PDE model, but that for smaller diffusivity, the PDE model provides valuable insight into the pattern forming potential of the system.