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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Genetic analysis of Helosciadium repens (Jacq.) W.D.J.Koch populations in Germany - Fundamental research for conservation management

Herden, Tobias 03 February 2020 (has links)
Crop wild relatives (CWR) are an indispensable and at the same time threatened genetic resources for plant breeding. The study uses wild species related to celery to demonstrate how genetic resources of CWRs can be actively maintained in their natural surroundings (in-situ). Genetic reserves should be designated for long term conservation of selected occurrences. The study presents the selection procedure in detail, aiming at the identification of occurrences and sites suitable for the designation of genetic reserves, the spatial model of a genetic reserve and first practical results of the project. The overall aim of the project is the establishment of a nationwide network of genetic reserves for Apium graveolens, Helosciadium repens, H. nodiflorum and H. inundatum, the four wild celery species native to Germany. Helosciadum repens (Jacq.) W.D.J.Koch is threatened by genetic erosion due to a decline in population numbers and sizes. The loss of any population is an irretrievable loss of diversity and opportunity to enhance crops in the future. Genetic reserves are one way to conserve these populations and their genetic potential. Twenty-seven populations were selected for the analysis in a decision process based on site information. Microsatellites (SSR) were used to elucidate the genetic diversity of German populations. A cluster analysis was performed to see if the individuals form clusters of similarity. For that, a discriminate analysis of principal components (DAPC) was conducted, as the inbreeding index indicated a high number of inbreeding events in the populations and thus discordance with HWE (Hardy-Weinberg equilibrium). The analysis identified six genetic groups, which coincide well with the geographic origin of the analysed plants. The allelic richness (mean counts of alleles per individual per population) was higher in the southern populations compared to the northern ones. This North-South discrepancy was also visible as a high heterogeneity in the cluster assignments in the DAPC analysis. These differences in genetic diversity might be a result of the biogeographic history of Europe, especially the last glacial maximum. For the establishment of genetic reserves, two populations were considered as most important: The population that differs the most from the average genetic composition and the population that represents the average genetic composition of a population the best. The two extremes of differentiation were interpreted as such that the former has a specific adaptation to its local environment, and the latter represents all populations the best. DifferInt was used to analyse the SSR data and validate the differentiation of all populations compared to a pool of populations. However, SSRs are not capable of detecting adaptive traits. Populations were additionally chosen from different eco-geographic units (EGU), to increase the chance of capturing different traits. EGUs (Naturräume) are areas of specific abiotic and biotic features. These features may influence selection pressures and induce local adaptations. Based on site parameters and genetic data, 14 most appropriate wild populations (MAWP) were identified for genetic reserves establishment. For H. repens, two eco-forms are known and described in the literature. Besides their different habitats (terrestrial/semi-terrestrial and aquatic) they can be differentiated by morphological traits. Leave and stolon sizes and flowering behaviour differ significantly. Furthermore, the roots of the aquatic forms do not anchor in soil but on other aquatic plants, wood or roots of trees, while the terrestrial form exhibits a shallow root system network similar to other perennial species. To this end, no genetic analysis was conducted to clarify the phylogenetic status of the putative forms and authors avoided the usage of any specific noun rather than form. The SSR data from the previous study was evaluated, particularly with regards to the two forms. Additionally, an ISSR analysis was conducted, and the data was used to perform a PCA. There was no genetic clustering regarding the two forms neither in the SSR nor in the ISSR data. Nonetheless, the North-South discrepancy in the genetic diversity that was visible in the DAPC plot was confirmed in the PCA of the ISSR data. However, markers may fail to detect quantitative variation for adaptively important traits. As the most obvious difference in the two habitats was the water availability, the adaptation of both forms to drought stress was studied by measuring the relative water content of leaves, system water content and water loss during drought stress conditions. The stomatal index was measured for different water treatment levels. The results indicate that phenotypic plasticity rather than genotypic adaptation is responsible for different H. repens phenotypes.
2

Genetic fingerprints of microalgal culture strains: amplified fragment length polymorphism (AFLP) for investigations below the species level / Genetischer Fingerabdruck von Kulturstämmen von Mikroalgen: Untersuchungen unterhalb des Artniveaus mittels AFLP (amplified fragment length polymorphism)

Müller, Julia 28 June 2005 (has links)
Ziel der vorliegenden Arbeit war die Untersuchung von Mikroalgen-Kulturstämmen unterhalb des Artniveaus. Für Service-Kulturensammlungen sind diese Untersuchungen wichtig, um die genetische Diversität der vorhandenen bzw. neu aufzunehmender Kulturen zu erfassen, Stämme eindeutig zu identifizieren oder auch Kontaminationen auszuschließen. Zu diesem Zweck wurden häufig in der Forschung genutzte Stämme von Mikroalgen mithilfe von genetischen Fingerabdrücken, die mit der AFLP (amplified fragment length polymorphism) Technik generiert wurden, untersucht. Mittels AFLP was es möglich, verschiedene Stämme derselben Art (Chlorella vulgaris) zu unterscheiden und für jedes Isolat einen charakteristischen genetischen Fingerabdruck zu erhalten. Da diese genomischen Variationen innerhalb derselben Art auch mit Unterschieden in physiologischen/biochemischen Eigenschaften korreliert sein können, ist es wichtig genau festzuhalten, welches Isolat für einen Versuch oder eine biotechnologische Anwendung verwendet wurde. Mit der AFLP-Technik war es ferner möglich, phänotypisch unterschiedliche Mutanten von Parachlorella kessleri und den entsprechenden Wildtyp zu unterscheiden. Normalerweise ist es mit AFLP nicht möglich, Algenkulturen zu untersuchen, die mit anderen Organismen kontaminiert sind. Das Problem hierbei ist, dass bei den generierten Fragmenten nicht unterschieden werden kann, ob sie von der Alge stammen oder von der Kontamination. Es konnte hier jedoch gezeigt werden, dass kontaminierte Kulturen trotzdem mit AFLP untersucht werden können. Hierzu war es nötig, Kulturen mit unterschiedlichem Verhältnis von Algen- und Bakterienzellen zu untersuchen. Außerdem konnte gezeigt werden, dass Infektionen von Algenkulturen mit Viren, die meistens schwer nachzuweisen sind, mittels AFLP festgestellt werden können. Kryokonservierung ist mittlerweile die Methode der Wahl zur Langzeitaufbewahrung von Mikroalgen. Es wird davon ausgegangen, dass diese Aufbewahrungsmethode genetisch stabile Kulturen über Jahrzehnte hinweg garantieren kann. Jedoch wurde bis heute die genetische Stabilität von kryokonservierten Algen noch nicht überprüft und deshalb in der vorliegenden Arbeit mithilfe der AFLP-Technik untersucht.
3

Taxonomic revision of the genus <Sticherus> (Gleicheniaceae - Pteridophyta) in the Neotropics / Revisión Taxonómica del género <Sticherus> (Gleicheniaceae - Pteridophyta) en el Neotrópico

Gonzales Rocabado, María Jasivia 02 July 2003 (has links)
No description available.

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