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Probing the functional and conformational dynamics of the chaperonins GroEL and GroESKad, Neil M. January 1998 (has links)
No description available.
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Structural Studies of Saccharomyces cerevisiae V1-ATPase in the Stationary Phase of Yeast Cell CultureTuhman-Mushkin, Jana 16 August 2012 (has links)
Vacuolar-type ATPases (V-ATPases) are ubiquitous membrane-bound protein complexes present in the endo-membrane system of all eukaryotic cells. In eukaryotic cells, the reversible dissociation of the V1 and Vo regions is an essential mechanism for regulating V-ATPase activity. Therefore, knowledge of the structure of the dissociated V1-ATPase is necessary for understanding the regulation of V-ATPase activity. In this thesis, I showed that by introducing a 3xFLAG tag at the C terminus of different V1-ATPase subunits, highly purified V1-ATPase complex could be isolated. Electron cryomicroscopy (cryo-EM) was used for initial analysis of the intact V1-ATPase. In addition to the intact complex, partial V1-ATPase subcomplexes with different subunit compositions were isolated from yeast cells in late log phase. All of the isolated subcomplexes were found to contain the major V1-ATPase subunits A and B, but differed in the peripheral stalk subunit composition.
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Structural Studies of Saccharomyces cerevisiae V1-ATPase in the Stationary Phase of Yeast Cell CultureTuhman-Mushkin, Jana 16 August 2012 (has links)
Vacuolar-type ATPases (V-ATPases) are ubiquitous membrane-bound protein complexes present in the endo-membrane system of all eukaryotic cells. In eukaryotic cells, the reversible dissociation of the V1 and Vo regions is an essential mechanism for regulating V-ATPase activity. Therefore, knowledge of the structure of the dissociated V1-ATPase is necessary for understanding the regulation of V-ATPase activity. In this thesis, I showed that by introducing a 3xFLAG tag at the C terminus of different V1-ATPase subunits, highly purified V1-ATPase complex could be isolated. Electron cryomicroscopy (cryo-EM) was used for initial analysis of the intact V1-ATPase. In addition to the intact complex, partial V1-ATPase subcomplexes with different subunit compositions were isolated from yeast cells in late log phase. All of the isolated subcomplexes were found to contain the major V1-ATPase subunits A and B, but differed in the peripheral stalk subunit composition.
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The Biochemical Characterization of the ATPase activity of three Hsp82 point mutants: Hsp82pA587T, Hsp82pG313S, and Hsp82pE381KMai, BaoChan N Unknown Date
No description available.
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Microtubule interactions and regulation of the mitotic kinesin-like protein-1 and kinesin-like calmodulin-binding proteinDeavours, Bettina Edith 10 December 2001 (has links)
Microtubules are essential for many dynamic processes occurring within eukaryotic cells including organelle and vesicular trafficking, motility of cilia and flagella, and mitosis. Microtubules operate in conjunction with the kinesin superfamily of microtubule-dependent motor proteins, which use the energy from ATP hydrolysis to "walk" along microtubule tracks, and in doing so generate force for the transport of cellular cargo and mitosis. The goal of this project was to define the microtubule interactions and regulation of two kinesin-like proteins (KLPs), the Homo sapiens mitotic kinesin-like protein-1 (HsMKLP-1) and the Arabidopsis thaliana kinesin-like calmodulin-binding protein (KCBP). Functional domains of HsMKLP-1 and KCBP were heterogeneously expressed in insect cells (HsMKLP-1) and/or E. coli (HsMKLP-1, KCBP) and used to examine the microtubule binding and ATPase activity of HsMKLP-1 and KCBP catalytic domains.
Overall, the HsMKLP-1 catalytic domain was found to operate in a similar fashion to other KLPs with respect to microtubule binding and ATP hydrolysis, but HsMKLP-1 exhibited enhanced microtubule binding of the dimer and weaker affinity for ATP that functionally distinguishes it from other KLPs. HsMKLP-1 proteins were also used to generate HsMKLP-1 specific antibodies to be used as a tool for characterizing native HsMKLP-1. To define the role of nuclear localization in regulating the activity of HsMKLP-1 during interphase, sequences directing nuclear localization of HsMKLP-1 were identified. Mutation of the nuclear localization sequence 799PNGSRKRR806 to 799PNGSRTSR806 or removal of AA's 830-856 of HsMKLP-1, which contains the nuclear localization sequence 851PKRKKP856, were sufficient to abolish nuclear localization. In the absence of a functional nuclear localization sequence HsMKLP-1 localized to microtubule plus ends, suggesting that nuclear localization serves to limit the interaction of HsMKLP-1 with the interphase microtubule array.
The KCBP catalytic domain, which contains a calmodulin-binding site, was used to determine the effect of Ca2+/calmodulin on the microtubule binding and ATPase activity of KCBP. Ca2+/calmodulin was found to inhibit the binding of KCBP to microtubules and reduced the motor's microtubule-stimulated ATPase activity, which suggests that Ca2+/calmodulin may modulate the activity of KCBP in vivo by regulating the motor's association with microtubules. / Ph. D.
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Rôle de la reptine dans le carcinome hépatocellulaire / Role of Reptin in hepatocellular carcinomaGrigoletto, Aude 30 November 2012 (has links)
Le carcinome hépatocellulaire (CHC) est le principal cancer primitif du foie et est associé à un très mauvais pronostic. Notre équipe a mis en évidence que la Reptine et la Pontine, des AAA+ ATPases homologues, sont surexprimées dans le CHC par rapport au foie non tumoral. Au cours de ce travail de thèse, j’ai contribué à démontrer que l’extinction de la Reptine par l’induction de shRNA suffit à arrêter la croissance de tumeurs déjà établies, et même à induire leur régression dans des xénogreffes chez la souris. Ces résultats encourageants suggèrent que la Reptine pourrait être une cible thérapeutique dans le CHC. L’utilisation de siRNA en thérapeutique n’étant pas envisageable actuellement, il parait plus pertinent de tenter de cibler la Reptine via son activité ATPase. Le principal objectif de ma thèse était donc de déterminer l’implication de l’activité ATPase de la Reptine pour ses propriétés oncogéniques dans le CHC. Nos résultats ont montré que des mutants inactifs de la Reptine (D299N et E300G) ont un effet dominant négatif et ne sont pas capables de complémenter l’absence de la Reptine endogène, ce qui conduit à une diminution significative de la croissance des cellules HuH7 et Hep3B, et à une induction de l’apoptose. Ceci indique que l’activité ATPase de la Reptine est nécessaire pour la croissance et la survie des cellules de CHC. Enfin, grâce à une étude transcriptomique, nous avons identifié de nouveaux gènes dont l’expression est régulée par la Reptine et/ou la Pontine. Parmi ces gènes, certains pourraient être impliqués dans les fonctions oncogéniques de la Reptine et/ou de la Pontine dans le CHC. Finalement, ce travail a permis de mettre en évidence l’implication de l’activité ATPase de la Reptine, et d’apporter des éléments permettant de mieux comprendre le mécanisme d’action de la Reptine dans le CHC. / Hepatocellular carcinoma (HCC) is the main primary cancer of the liver and is often associated with poor prognosis. Our team has demonstrated that Reptin and Pontin, two AA+ ATPases, are overexpressed in HCC compared to normal liver. Moreover this overexpression is also associated with poor prognosis. In the course of my PhD, I demonstrated that shRNA-mediated silencing of Reptin is sufficient to inhibit tumor growth and even can promote their regression in xenografted mice. These encouraging results suggest that Reptin might represent a novel therapeutic target in HCC. As the use of siRNA as therapeutic tools is still debated, the targeting of Reptin enzymatic activity might represent a more relevant approach to impair its functions. To this end I first proposed to determine the involvement of Reptin ATPase activity in HCC oncogenesis. My results show that ATPase inactive Reptin mutants (D299N and E300G) play dominant negative roles toward Reptin functions and are unable to complement for the depletion of endogenous Reptin, thereby leading to a significant decrease of cell growth and to a significant increase of apoptosis in HuH7 and Hep3B cells. These results show that Reptin’s ATPase activity is necessary for HCC cell growth and survival. Moreover, using a transcriptomic approach that compared gene expression upon siRNA-mediated Reptin or Pontin silencing, we identified specific genes whose expression is under the control of those proteins and whose functions might provide mechanistic explanation to Reptin’s involvement in HCC. Collectively, the results obtained during my PhD thesis have characterized the contribution of Reptin ATPase activity to HCC growth and development and might represent a founding step in the understanding of Reptin’s biology in cancer development.
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Indução da expressão in vivo e caracterização cinética da fosfatase ácida de Enterobacter sp. isolada de raízes de orquidáceasSato, Vanessa Sayuri [UNESP] 29 March 2011 (has links) (PDF)
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sato_vs_me_jabo.pdf: 522350 bytes, checksum: 34c42a9a6f174fa4f2002e3d48b07c50 (MD5) / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) / A capacidade de bactérias endofíticas em solubilizar fosfato inorgânico é alvo de grande interesse por parte dos microbiologistas, uma vez que as fosfatases são responsáveis por hidrolisar compostos orgânicos produzindo fósforo solúvel. Dessa forma, a fosfatase ácida ligada à membrana (MBAP) foi obtida a partir de Enterobacter sp. isolada de raízes de Cattleya walkeriana (Orchidaceae) e identificada pelo seqüenciamento do gene 16S rRNA. A expressão da enzima mostrou-se estritamente regulada pelo fósforo (expressão ideal em 7 mm). O pH ótimo aparente (3,5) não foi afetado pela concentração de p-nitrofenilfosfato. Em pH 3,5, a enzima é uma fosfomonidrolase inespecífica capaz de hidrolisar os substratos PNPP (61,2 U/mg), ATP (19,7 U/mg), e o pirofosfato (29,7 U/mg), com K0.5 de 0,06 mM, 0,11 mM e 0,08 mM, respectivamente. A enzima exibi cinética Michaelina para o pNPP (n=1,2). Para o ATP e o pirofosfato interações sítio-sítio foram observadas com n=1,6 e 2,3, respectivamente. Os íons de magnésio foram potentes estimuladores (K0.5=2,2 mM), enquanto o arsenato e o fosfato foram potentes inibidores competitivos. A atividade PNPPase foi inibida pelo EDTA, mas não pelo cálcio, levamisol, zinco, cobalto e phidroximercuribenzoato. A entalpia de inativação térmica foi da ordem de 77,5 kcal.mol- 1. Os resultados sugerem que a produção da fosfatase ácida ligada à membrana representa um mecanismo de solubilização do fosfato mineral aumentando a disponibilidade de nutrientes para as plantas / The ability of endophytic bacteria in solubilizing inorganic phosphate is of great interest by microbiologists since phosphatases are responsible for catalyzing the hydrolysis of organic compounds producing soluble phosphorus. Thus, the membranebound acid phosphatase (MBAP) was obtained from Enterobacter sp. isolated from Cattleya walkeriana (Orchidaceae) roots and identified by the 16S rRNA gene sequencing analysis. The enzyme expression was demonstrated to be strictly regulated by phosphorus (optimal expression at 7 mM). The enzyme was obtained by centrifugation at 100.000g for 1 h at 4ºC. The apparent optimal pH (3.5) was not affect by p-Nitrophenyl phosphate concentration. At pH 3.5, the enzyme showed a broad substrate specificity hydrolyzing different substrates such as PNPP (61.2 U/mg), ATP (19.7 U/mg), and pyrophosphate (29.7 U/mg), with K0.5 values of 0.06 mM, 0.11 mM and 0.08 mM, respectively. The hydrolysis of PNPP by the enzyme exhibited Michaelian kinetics with n= 1.2. For ATP and pyrophosphate site-site interactions were observed with n= 1.6 and 2.3, respectively. Although magnesium ions were stimulatory (K0.5= 2.2 mM), arsenate and phosphate were a powerful competitive inhibitor. The PNPPase activity was inhibited EDTA but not by calcium, levamisole, zinc, cobalt and phydroxymercurybenzoate. The ΔH for thermal inactivation was 77.5 kcal.mol-1. Our results suggest that the production of a membrane-bound acid phosphatase might be one mechanism of mineral phosphate solubilization turn it´s nutrients availability to plants
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THE ROLE OF ION-MOTIVE ATPASES IN THE INSECT GUTD'Silva, Natalie January 2018 (has links)
The present set of studies examines the roles of two ion-motive enzymes, vacuolar-type H+-ATPase (VA) and Na+/K+ ATPase (NKA), in energizing transepithelial ion transport across the larval caecum and midgut epithelia of Drosophila melanogaster and Aedes aegypti. Even though both VA and NKA are expressed in insect epithelia, VA was considered the more important enzyme until the early 2000 because the ion transport was unaffected by the NKA inhibitor ouabain in many insect epithelia, a phenomenon termed the ‘ouabain paradox’. This paradox was resolved by the discovery of an organic anion transporter (OATP) that is colocalized with NKA and prevents the actions of ouabain on NKA. Since the resolution of the ouabain paradox, this is the first set of studies that investigates the role of NKA in energizing ion transport across the caeca and midgut of insects. First, I show that both VA and NKA are expressed in the caecum and the midgut. Moreover, the ATPase enzyme activities of VA and NKA are quantitatively similar within each region of the gut that was studied, suggesting that both ATPases may be important for establishing favourable electrochemical gradients for transport of ions across the gut. I used ATPase inhibitors to demonstrate that cation transport is dependent on the actions of both VA and NKA. Furthermore, this is the first set of studies that provides an insight into the ion transport mechanisms of the gastric caecum, an organ that is understudied in insects. In Aedes aegypti, I show that 5-hydroxytryptamine regulates the VA-rich cells of the gastric caecum, and therefore the rates of ion transport of these cells. Additionally, I also show that rearing salinity conditions for Aedes aegypti larvae alters the expression patterns of VA and NKA in the gastric caecum. In freshwater, increased activity of VA and NKA energizes transport of ions into the lumen of the caecum that likely maintains fluid volumes and ionic composition at levels appropriate for digestion and absorption. Overall, these studies provide novel information for caeca and midgut-specific actions of VA and NKA in insects, and present a number of new avenues for future research. / Thesis / Doctor of Philosophy (PhD) / This thesis focuses on investigating the roles of two enzymes, vacuolar-type H+-ATPase (VA) and Na+/K+ ATPase (NKA), which utilize energy to transport electrically charged atoms (ions) across the cells of the insect gut. Although VA was considered the more important of the two enzymes until the early 2000s, I have demonstrated that NKA also plays a role in maintaining insect gut function in fruit flies and mosquito larvae. Furthermore, the activities of both enzymes are dependent on the salinity of the medium in which mosquito larvae are reared, suggesting that they play a role in maintaining the ionic composition of the gut fluids in freshwater larvae. Additionally, I have also demonstrated that a neurochemical, serotonin, can modulate the activity of gut cells in mosquito larvae. Overall, this thesis provides novel information on the actions of VA and NKA in the insect gut, and presents a number of new avenues for future research.
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Processos osmorregulatórios no caranguejo Dilocarcinus pagei (Decapoda, Trichodactylidae), um antigo invasor da água doce: estudo das atividades (Na,K)-ATPase e V-ATPase branquiais / Osmoregulatory processes in the crab Dilocarcinus pagei (Decapoda, Trichodactylidae), an old invader of freshwater: characterization of the gill (Na,K)-ATPase and V-ATPase activitiesFirmino, Kelly Cristina Silva 03 June 2009 (has links)
Os crustáceos são originariamente marinhos; ao longo da evolução, diversas espécies invadiram ambientes de salinidades menores, chegando à água doce. A capacidade dos crustáceos colonizarem com sucesso o ambiente dulcícola depende do desenvolvimento de mecanismos eficientes de hiperosmorregulação. A osmolalidade e a composição iônica da hemolinfa de um crustáceo, em meios diluídos, refletem o equilíbrio dinâmico entre a perda de íons por difusão e pela urina e sua reabsorção do meio externo, através das brânquias. A (Na,K)-ATPase branquial desempenha um papel chave no processo de captura de Na+ a partir de ambientes diluídos e suas características cinéticas vem sendo investigadas recentemente, embora as enzimas de caranguejos dulcícolas sejam pouco conhecidas. Segundo o modelo atual, a afinidade por Na+ é o parâmetro cinético mais variável entre as enzimas de diferentes espécies, refletindo a salinidade do habitat do animal, de modo que enzimas de espécies bem adaptadas à água doce apresentam afinidades maiores por Na+. Entretanto, vários resultados conflitantes têm sido relatados nos últimos anos. Recentemente, foi proposto que uma V-ATPase também desempenha papel essencial na captação de Na+ através das brânquias dos crustáceos dulcícolas. Esta enzima ainda é praticamente desconhecida: suas características cinéticas não foram estudadas e a relação entre a magnitude da sua atividade e a salinidade do meio externo não está estabelecida. Este projeto teve por objetivo a caracterização das enzimas (Na,K)-ATPase e V-ATPase das brânquias posteriores do caranguejo hololimnético Dilocarcinus pagei, considerado um antigo invasor da água doce. A (Na,K)-ATPase foi caracterizada em animais mantidos em água doce, a fim de comparar suas propriedades cinéticas com aquelas das enzimas de outras espécies de caranguejos, habitantes de meios mais salinos, visando melhorar o entendimento das adaptações bioquímicas associadas à invasão da água doce. A V-ATPase foi caracterizada em animais mantidos em água doce ou expostos por diferentes intervalos de tempo à salinidade de 21‰ ou ainda aclimatados por 10 dias a diferentes salinidades (5-21‰), visando estabelecer uma relação entre a magnitude da atividade e a salinidade do meio, além de investigar os mecanismos de regulação da atividade da enzima. A análise da fração microsomal branquial de D. pagei mantido em água doce em gradiente contínuo de sacarose mostrou dois picos protéicos (25-35% e 35-45% de sacarose), ambos com atividades K+-fosfatase, (Na,K)-ATPase e V-ATPase. Estes resultados indicam a presença de frações de membrana com densidades distintas, apresentando, em ambos os casos, as principais bombas de íons envolvidas na captação de Na+. Estas membranas podem ser originárias de locais distintos do epitélio branquial posterior assimétrico deste caranguejo. A análise por Western blotting revelou duas bandas imunoespecíficas (Mr 116 kDa e 105 kDa) correspondentes à subunidade α da (Na,K)-ATPase, sugerindo a presença de duas isoformas nas brânquias posteriores do animal. A estimulação da atividade K+-fosfatase da (Na,K)-ATPase pelo PNFF envolveu interações sítio-sítio (nH= 1,4), com V= 43,4 ± 2,2 U mg-1 e K0,5= 1,13 ± 0,06 mmol L-1. A estimulação da atividade da enzima por K+ (V= 39,9 ± 1,9 U mg-1 e K0,5= 4,2 ± 0,2 mmol L-1), Mg2+ (V= 45,0 ± 2,2 U mg-1, K0,5= 0,82 ± 0,04 mmol L-1) e NH4+ (V= 31,7 ± 1,6 U mg-1, K0,5= 19,0 ± 0,9 mmol L-1) também ocorreu por meio de interações sítio-sítio. A afinidade aparente da enzima pelo PNFF e Mg2+ foi similar às relatadas para enzimas de outros crustáceos, incluindo caranguejos habitantes de meios mais salinos. Entretanto, a enzima de D. pagei apresentou menor afinidade aparente por íons K+ que as outras espécies já estudadas. A atividade K+-fosfatase da (Na,K)-ATPase branquial de D. pagei mantido em água doce foi estimulada sinergicamente por K+ e NH4+ sugerindo a presença de dois sítios de ligação para estes íons na molécula da enzima. Ouabaína (4 mmol L-1) inibiu a atividade PNFFase total da preparação (≈ 89%), por meio de uma curva monofásica (KI= 225,6, ± 11,3 µ mol L-1), sugerindo que, se presentes na fração microsomal, as duas isoenzimas da (Na,K)-ATPase apresentam sensibilidades próximas para o inibidor. Ortovanadato (1µmol L-1) inibiu 95% da atividade PNFFase total por meio de uma curva bifásica, reforçando a sugestão da presença de duas isoenzimas na preparação. A hidrólise do ATP pela (Na,K)-ATPase branquial de D. pagei mantido em água doce ocorreu em sítios de alta (V= 6,4 ± 0,32 U mg-1 e K0,5 = 0,34 ± 0,02 µmol L-1) e baixa afinidade (V= 127,1 ± 6,2 U mg-1e KM = 84 ± 4,1 µmol L-1). Não foi encontrada uma correlação direta entre a afinidade pelo ATP e o habitat de diferentes espécies de caranguejos. A atividade (Na,K)-ATPase específica de D. pagei mantido em água doce foi cerca de 3 vezes menor que relatada para Potamon edulis, única espécie de caranguejo dulcícola para a qual este parâmetro foi relatado. Atividades específicas muito maiores foram encontradas para caranguejos estuarinos, particularmente quando aclimatados a salinidades baixas. A baixa atividade específica determinada para D. pagei pode ser atribuída ao baixo gradiente osmoiônico que este animal mantém entre a hemolinfa e o meio externo, comparado a outros caranguejos dulcícolas, que o caracteriza como uma espécie particularmente bem adaptada ao ambiente dulcícola. A estimulação da atividade da enzima por íons Na+ (V = 133,8 ± 7,3 U mg-1e K0,5= 4,7 ± 0,3 mmol L-1), Mg2+ (V= 136,5 ± 8,0 U mg-1, K0,5= 0,62 ± 0,04 mmol L-1), K+ (V = 131,7± 7,9 U mg-1 e K0,5= 0,47 ± 0,03 mmol L-1) e NH4+ (V= 125,6 ± 6,3 U mg-1, K0,5= 1,90 ± 0,09 mmol L-1) ocorreu por meio de interações sítio-sítio. A afinidade aparente por Na+ da enzima de D. pagei é baixa, se comparada às relatadas para outros animais dulcícolas, e similar às encontradas para espécies estuarino/marinhas. Em contraste, a afinidade aparente por K+ é 2,5 a 5 vezes maior que as determinadas para espécies habitantes de meios mais salinos e aparentemente está mais relacionada ao habitat do animal que a afinidade por Na+. Esta possibilidade é coerente com o fato da (Na,K)-ATPase branquial dos crustáceos apresentar os sítios de ligação de K+ expostos para a hemolinfa, o que possibilita a modulação da atividade da enzima pela concentração de K+ na hemolinfa. Ao contrário do observado para várias outras espécies de caranguejos, a atividade (Na,K)-ATPase branquial de D. pagei não foi estimulada sinergisticamente por K+ e NH4+. Entretanto, a presença de um dos íons no meio reacional provoca o aumento da afinidade aparente da enzima pelo outro em cerca de 3 vezes. Fisiologicamente, esta característica cinética pode ser importante para garantir o transporte de ambos os íons pela enzima, mesmo em presença de concentrações relativamente elevadas do outro. Ouabaína (3 mmol L-1) inibiu a atividade ATPase total (≈ 78%) por meio de uma curva bifásica (KI= 6,21 ± 0,32 µmol L-1 e 101,2 ± 5,1 µmol L-1), reforçando os resultados anteriores no sentido de demonstrar a existência de duas isoenzimas da (Na,K)-ATPase nas brânquias posteriores de D. pagei. Observou-se também uma inibição bifásica por ortovanadato (10 µmol L-1), que inibiu a atividade ATPase total em 85%. O pH ótimo para a atividade V-ATPase branquial de D. pagei foi de 7,5. A modulação da atividade V-ATPase do animal mantido em água doce por ATP (V= 26,5 ± 1,3 U mg-1; K0,5= 3,9 ± 0,2 mmol L-1) e Mg2+ (V = 27,9 ± 1,4 U mg-1; K0,5 =0,80 ± 0,04 mmol L-1) ocorreu por meio de interações cooperativas. Já a inibição da atividade ATPase insensível ao ortovanadato por bafilomicina A1 ocorreu segundo uma curva monofásica (KI= 55,0 ± 2,8 nmol L-1). Cerca de 44 % da atividade ATPase total foi inibida, correspondendo à V-ATPase. A atividade V-ATPase branquial de D. pagei diminuiu acentuadamente em resposta à exposição à salinidade de 21‰. Após 1h de exposição, a atividade diminuiu cerca de 3 vezes, chegando a 4 vezes após 24h, o que indica a atuação de mecanismos eficientes de regulação a curto prazo. Curiosamente, a atividade V-ATPase foi cerca de 2 vezes maior para um tempo de aclimatação de 120h a 21‰, comparado a 24 h, embora 2 vezes menor que a estimada em água doce. Passadas 240 h, a atividade voltou aos baixos níveis observados entre 1h e 24h, o que indica a ação de mecanismos de regulação a longo prazo. Além da diminuição da atividade específica também foi observado aumento da afinidade da enzima por ATP (12 vezes) e Mg2+ (3 vezes) em resposta à exposição dos animais a 21‰. Similarmente, ocorreu um aumento de até 190 vezes na afinidade da enzima por bafilomicina A1. Propõe-se que, em resposta à alteração de salinidade, ocorrem mudanças conformacionais tanto em V1 (onde se encontram os sítios de ligação de ATP e Mg2+) quanto V0 (onde se localiza o sítio de ligação de bafilomicina), resultando numa maior exposição do sítio para o inibidor e no aumento da afinidade por Mg2+ e ATP. Como os aumentos de afinidade são observados já após 1h de exposição, este mecanismo parece ser independente da expressão protéica e, portanto, não estaria relacionado à expressão de isoformas diferentes de alguma das subunidades da enzima. A diminuição da atividade V-ATPase branquial de D. pagei em resposta à exposição a uma salinidade elevada é compatível com os mecanismos propostos para a atuação desta enzima no processo de captura ativa de Na+ em crustáceos dulcícolas. Após 10 dias de aclimatação ainda se tem atividade V-ATPase detectável nas frações microsomais das brânquias posteriores do animal, possivelmente envolvida nas funções de regulação ácido-base e excreção de amônia. Os resultados obtidos para a aclimatação de D. pagei por um período de 10 dias a salinidades entre 5 e 21‰ mostraram também uma diminuição acentuada da atividade V-ATPase em resposta ao aumento da salinidade. Entretanto, com exceção da salinidade mais baixa (5‰) não se observou aumento da afinidade da enzima por bafilomicina, sugerindo que esta alteração seja limitada a tempos de aclimatação mais curtos. Entretanto, também se verificou um aumento acentuado da afinidade da enzima por ATP e Mg2+. / Crustacean arose in the sea but, during evolution, several species invaded lower salinity biotopes, reaching fresh water. The ability of crustaceans to successfully colonize the freshwater biotope depends on efficient mechanisms of hyperosmoregulation. In dilute media, crustaceans\' hemolymph osmolality and ionic composition reflect a balance between diffusive and urinary ion losses, and active ion capture through the gills. The gill (Na,K)- ATPase plays a pivotal role in Na+ capture from dilute environments and its kinetic characteristics are under investigation in recent years, although freshwater crab enzymes are poorly known. According to the most recent model, the apparent affinity for Na+ is the most variable kinetic parameter among gill enzymes from different species, and reflects the salinity of the species\' habitat. Thus, enzymes from species which are well adapted to freshwater usually present higher affinities for Na+. However, several recent results are incompatible with this model. On the other hand, it has been proposed that a V-ATPase is also involved in Na+ capture through the gills of hololimnetic crustaceans. This enzyme is almost completely unknown: its kinetic characteristics have not been studied yet and the relationship between the magnitude of its activity in the gills and the external medium salinity has not been established. This work aimed to characterize the (Na,K)-ATPase and V-ATPase from the posterior gill from the holimnetic crab Dilocarcinus pagei, considered an old fresh water colonizer. The (Na,K)- ATPase was characterized in animals maintained in fresh water, in order to establish a comparison of its kinetic properties with those of enzymes from other crab species that inhabit more saline media. This comparison may enhance our understanding of the biochemical adaptations associated to fresh water invasion. V-ATPase was characterized in animals kept in fresh water or exposed for varying time intervals to a medium of 21? salinity, or else acclimated for 10 days to media of different salinities (5-21?), aiming to establish a relationship between the enzyme specific activity in the gill tissue and the external salinity, and also investigate the mechanisms involved in enzyme activity regulation. The analysis of D. pagei gill microsomes in a continuous-density sucrose gradient revealed two protein peaks (25-35% and 35-45% sucrose), both showing K+-phosphatase, (Na,K)-ATPase and V-ATPase activities. These results indicate the presence of membrane fractions of distinct densities, both presenting the main ion pumps involved in Na+ capture. These membranes may originate from different places in the asymmetric posterior gill epithelium from this crab. Western compared to those reported for other freshwater animals, but similar to those found for estuarine/marine species. In contrast, the apparent affinity for K+ is 2.5 to 5-fold higher than those estimated for species that inhabit more saline media, and is apparently more related to the animals\' habitat than Na+ affinity. This possibility is consistent with the location of the (Na,K)-ATPase in crabs gill tissue, with K+ binding sites exposed to the hemolymph, allowing the direct modulation of enzyme activity by hemolymph K+ concentration. In contrast to data reported for other crab species, D. pagei gill (Na,K)-ATPase activity was not synergistically stimulated by K+ and NH4 +. However, the presence of one of these ions in the reaction medium results in an increase of about 3-fold in the apparent affinity of the enzyme for the other. This kinetic characteristic may be physiologically relevant to assure the transport of both ions, even in the presence of elevated concentrations of the other. Ouabain (3 mmol L-1) inhibited total ATPase activity (? 78%) through a biphasic curve (KI= 6.21 ± 0.32 mol L-1 and 101.2 ± 5.1 mol L-1) reinforcing previous results suggesting the presence of two isoenzymes in the microsomal preparations. A biphasic inhibition by orthovanadate (10 mol L-1) to about 15% residual activity was also observed. Optimal pH for D. pagei gill V-ATPase activity was 7.5. The modulation of enzyme activity of the animal kept in fresh water by ATP (V= 26.5 ± 1.3 U mg-1; K0.5= 3.9 ± 0.2 mmol L-1) and Mg2+ (V = 27.9 ± 1.4 U mg-1; K0.5 =0.80 ± 0.04 mmol L-1) occurred with positive cooperativity. The inhibition of the orthovanadate insensitive ATPase activity by bafilomycin A1 followed a monophasic curve (KI= 55.0 ± 2.8 nmol L-1). About 44 % of total ATPase activity was inhibited, corresponding to the V-ATPase. Dilocarcinus pagei gill V-ATPase activity substantially decreased in response to animal\'s exposure to 21? salinity. After 1h exposure, the activity diminished about 3-fold, reaching 4- fold after 24h, indicating the action of efficient short-time regulation mechanisms. Interestingly, V-ATPase activity was about 2-fold higher after 120h exposure, compared to 24h, although 2- fold lower compared to that estimated in fresh water. After 240h, the activity returned to the low levels observed for 1 and 24 h, indicating efficient long-term regulation. Besides the decrease in specific activity, it was also observed an increase in enzyme\'s apparent affinity for ATP (12 fold) and Mg2+ (3 fold) in response to animal\'s exposure to 21? salinity. Simultaneously, the enzyme\'s affinity for bafilomycin A1 increased up to 190-fold. We propose that, in response to salinity alteration, conformational changes take place both in V1 (in which the ATP and Mg2+ binding sites are located) and V0 (which contains the bafilomycin A1 bindind site), resulting in higher exposition of the inhibitor binding site and also higher affinity for Mg2+ and ATP. As the affinity increases are observed after just 1h exposure, this regulatory mechanism seems to be independent of protein expression and, thus, should not be related to the expression of distinct isoforms of some enzyme subunit. The lowering of gill V-ATPase activity in D. pagei in response to exposure to an elevated salinity is consistent with the mechanisms proposed for the role of this enzyme in active Na+ capture in hololimnetic crustaceans. After 10 days at 21, the gill microsomal fractions still show a little V-ATPase activity, possibly related to acid-base regulation and ammonia excretion processes. The results obtained for the acclimation of D. pagei for 10 days at salinities in the range 5 to 21? also showed a substantial decrease of V-ATPase activity in response to the increase in medium salinity. However, except for 5?, it was not observed an increase of enzyme\'s affinity for bafilomycin, suggesting that this alteration is limited to shorter periods of exposure. However, a significant increase in the enzyme\'s affinity for ATP and Mg2+ was also observed.
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Osteopetrosis Mutation R444L causes Endoplasmic Reticulum Retention and Misprocessing of Vacuolar H+-ATPase a3 SubunitBhargava, Ajay 19 July 2012 (has links)
Osteopetrosis is characterized by increased bone density and fragility. The R444L missense mutation in the human V-ATPase a3 subunit causes this disease. Modeling the R444L mutation in mouse a3 caused endoplasmic reticulum (ER) retention of a3 with attendant abrogation of maturation and trafficking of the glycoprotein and its degradation. The mutant protein also displayed altered conformation and increased degradation. Together, these data suggest that R444 is involved in protein folding or stability significant to mammalian a3, and that infantile osteopetrosis caused by the R444L mutation in the V-ATPase a3 subunit is another member of the growing class of protein folding diseases. We also ascertained that the N-Glycosylation sites of the a3 glycoprotein lie at position N484 and N504, data that help to refine the topology of the a subunit. Overall, this study sheds new light onto the role that R444 plays in a subunit structure, and refines a subunit topology.
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