Non-intrusive acoustic thermometry using an acoustic impulse generator and two microphones is developed and integrated with tomographic techniques to reconstruct temperature contours. A low velocity plume at around 450 °F exiting through a rectangular duct (3.25 by 10 inches) was used for validation and reconstruction. 0.3 % static temperature relative error compared with thermocouple-measured data was achieved using a cross-correlation algorithm to calculate speed of sound. Tomographic reconstruction algorithms, the simplified multiplicative algebraic reconstruction technique (SMART) and least squares method (LSQR), are investigated for visualizing temperature contours of the heated plume. A rectangular arrangement of transmitter and microphones with a traversing mechanism collected two orthogonal sets of acoustic projection data. Both reconstruction techniques have successfully recreated the overall characteristic of the contour; however, for the future work, the integration of the refraction effect and implementation of additional angled projections are required to improve local temperature estimation accuracy. The root-mean-square percentage errors of reconstructing non-uniform, asymmetric temperature contours using the SMART and LSQR method are calculated as 20% and 19%, respectively. / Master of Science

Proton computed tomography (pCT) is an image modality that will improve treatment planning for patients receiving proton radiation therapy compared with the current techniques, which are based on X-ray CT. Images are reconstructed in pCT by solving a large and sparse system of linear equations. The size of the system necessitates matrix-partitioning and parallel reconstruction algorithms to be implemented across some sort of cluster computing architecture. The prototypical algorithm to solve the pCT system is the algebraic reconstruction technique (ART) that has been modified into parallel versions called block-iterative-projection (BIP) methods and string-averaging-projection (SAP) methods. General purpose graphics processing units (GPGPUs) have hundreds of stream processors for massively parallel calculations. A GPGPU cluster is a set of nodes, with each node containing a set of GPGPUs. This thesis describes a proton simulator that was developed to generate realistic pCT data sets. Simulated data sets were used to compare the performance of a BIP implementation against a SAP implementation on a single GPGPU with the data stored in a sparse matrix structure called the compressed sparse row (CSR) format. Both BIP and SAP algorithms allow for parallel computation by creating row partitions of the pCT linear system. The difference between these two general classes of algorithms is that BIP permits parallel computations within the row partitions yet sequential computations between the row partitions, whereas SAP permits parallel computations between the row partitions yet sequential computations within the row partitions. This thesis also introduces a general partitioning scheme to be applied to a GPGPU cluster to achieve a pure parallel ART algorithm while providing a framework for column partitioning to the pCT system, as well as show sparse visualization patterns that can be found via specified ordering of the equations within the matrix.

In this thesis, we design, develop and implement parallel algorithms for irregular problems on heterogeneous multi-core architectures. Irregular problems exhibit random and unpredictable memory access patterns, poor spatial locality and input dependent control flow. Heterogeneous multi-core processors vary in: clock frequency, power dissipation, programming model (MIMD vs. SIMD), memory design and computing units, scalar versus vector units. The heterogeneity of the processors makes designing efficient parallel algorithms for irregular problems on heterogeneous multicore processors challenging. Techniques of mapping tasks or data on traditional parallel computers can not be used as is on heterogeneous multi-core processors due to the varying hardware. In an attempt to understand the efficiency of futuristic heterogeneous multi-core architectures on applications we study several computation and bandwidth oriented irregular problems on one heterogeneous multi-core architecture, the IBM Cell Broadband Engine (Cell BE). The Cell BE consists of a general processor and eight specialized processors and addresses vector/data-level parallelism and instruction-level parallelism simultaneously. Through these studies on the Cell BE, we provide some discussions and insight on the performance of the applications on heterogeneous multi-core architectures. Verifying these experimental results require some performance modeling. Due to the diversity of heterogeneous multi-core architectures, theoretical performance models used for homogeneous multi-core architectures do not provide accurate results. Therefore, in this thesis we propose an analytical performance prediction model that considers the multitude architectural features of heterogeneous multi-cores (such as DMA transfers, number of instructions and operations, the processor frequency and DMA bandwidth). We show that the execution time from our prediction model is comparable to the execution time of the experimental results for a complex medical imaging application.

In this thesis, we design, develop and implement parallel algorithms for irregular problems on heterogeneous multi-core architectures. Irregular problems exhibit random and unpredictable memory access patterns, poor spatial locality and input dependent control flow. Heterogeneous multi-core processors vary in: clock frequency, power dissipation, programming model (MIMD vs. SIMD), memory design and computing units, scalar versus vector units. The heterogeneity of the processors makes designing efficient parallel algorithms for irregular problems on heterogeneous multicore processors challenging. Techniques of mapping tasks or data on traditional parallel computers can not be used as is on heterogeneous multi-core processors due to the varying hardware. In an attempt to understand the efficiency of futuristic heterogeneous multi-core architectures on applications we study several computation and bandwidth oriented irregular problems on one heterogeneous multi-core architecture, the IBM Cell Broadband Engine (Cell BE). The Cell BE consists of a general processor and eight specialized processors and addresses vector/data-level parallelism and instruction-level parallelism simultaneously. Through these studies on the Cell BE, we provide some discussions and insight on the performance of the applications on heterogeneous multi-core architectures. Verifying these experimental results require some performance modeling. Due to the diversity of heterogeneous multi-core architectures, theoretical performance models used for homogeneous multi-core architectures do not provide accurate results. Therefore, in this thesis we propose an analytical performance prediction model that considers the multitude architectural features of heterogeneous multi-cores (such as DMA transfers, number of instructions and operations, the processor frequency and DMA bandwidth). We show that the execution time from our prediction model is comparable to the execution time of the experimental results for a complex medical imaging application.

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