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La finalité de l’étude est d’explorer la gestion des écosystèmes aquatiques d’Europe et d’Afrique à travers le prisme de l’approche systémique. Cette approche est fondée sur la recherche de solutions générales et globales aux problèmes y afférents, sans sacrifier les particularités et spécificités propres à chaque écosystème. A la différence d’une gestion cloisonnée, fragmentée et sectorielle, l’intérêt d’une gestion globale et intégrée des ressources en eau rares, est de permettre une meilleure rationalisation de cette gestion, par la prise en compte de l’ensemble des contraintes et des opportunités y relatives, de façon qu’elle soit plus pertinente et soutenable. Dans cette optique, la comparaison entre les systèmes européens, globalement plus avancés et les systèmes africains, vise, d’une part, à souligner que quelque soit le système considéré, les problèmes sont quasiment les mêmes et que l’approche globale et intégrée reste le meilleur gage d’efficacité et d’efficience en vue de les résorber ; d’autre part, à montrer que ces systèmes peuvent être mutuellement bénéfiques, notamment en termes d’échanges de bons procédés ou de bonnes pratiques.On entend par écosystème aquatique, l’ensemble des eaux douces de toutes origines, superficielles, souterraines ou autres. Ces écosystèmes aquatiques entretiennent des interactions avec la terre, la mer et d’autres éléments de l’environnement global, qu’il importe de bien maîtriser, pour sacrifier aux exigences d’une gestion globale pertinente et intégrée desdits écosystèmes. / This study attempts to examine the management of freshwater resources in Africa and Europe, from an ecosystemic view point, and aims at global and appropriate solutions to problems, without neglecting local or regional specificities. Contrary to territorial and sector approaches, integrated water resource management is a better way to ensure a sustainable management of freshwater resources, taking into consideration all problems and opportunities pertaining thereto. In this regard, the first interest of comparing advanced European systems with African systems is to bring up global problems, in spite of regional or continental peculiarities, and to stress on the global and integrated approach as the best way of solving them effectively. The second interest is to show that managing these systems can be mutually beneficial if their respective advantages and weaknesses are considered.Freshwater resources comprise superficial or deep water of various origins, and interact with elements of the global environment (earth, sea). Their mastery is of utmost importance as it will permit the global, adequate and integrated management of such ecosystems.

Since 1961, a fourold increase in application of fertilizers in the United States has helped to double crop yields. Nutrients not used by crops are often transported to aquatic ecosystems adjacent to agricultural fields. In the Lower Mississippi Alluvial Valley, nutrients enter agricultural drainage ditches and are transported to receiving water bodies, eventually reaching the Gulf of Mexico. The annual occurrence of a hypoxic zone in the Gulf of Mexico is caused by nitrogen loads from the Mississippi River Basin. Objectives of these studies were: (1) evaluate how organic carbon amendments affect nitrate-nitrogen removal in agricultural drainage ditch systems, (2) determine effects of organic carbon amendments and flow rate on nitrate-nitrogen removal in a semi-controlled field setting using experimental drainage ditches, and (3) assess relationships between organic carbon and nitrogen content of overlying water, pore water, and sediments of drainage ditches throughout the Lower Mississippi Alluvial Valley. In laboratory experiments, nitrate-nitrogen removal in dissolved and particulate organic carbon treatments was greater than 90% compared to as low as 60% in control treatments. The optimal carbon-to-nitrogen ratio of organic carbon amendments for efficient nitrate-nitrogen removal was 5:1. Studies in experimental drainage ditches revealed that flow substantially lowered the ability of organic carbon amendments to remove nitrate-nitrogen with a maximum percent nitrate-nitrogen reduction of 31.6% in a dissolved organic carbon treatment, although implementation of low-grade weirs in experimental drainage ditches did result in removal of nitrate nitrogen in all treatments and at all flow rates. Examining the nitrogen and organic carbon contents in agricultural drainage ditches throughout the Lower Mississippi Alluvial Valley revealed that organic carbon content in overlying water, pore water, and sediments is lower than observed in other wetland-like ecosystems and indeed may be limiting denitrification and other nitrogen removal processes. Increasing organic carbon content overall could be achieved by using organic carbon amendments, but this body of research highlights that additional studies are necessary to ensure successful implementation of organic carbon amendments that reach their greatest potential as a management practice to effectively remove nitrate-nitrogen in the realistic settings of agricultural drainage ditches.

With widespread increases in air temperature, it is expected that the temperature of aquatic ecosystems will also increase, especially at high latitudes. Warmer streams and rivers could have severe, direct impacts on cold-adapted aquatic fauna but may also indirectly influence species by reducing the amount of suitable habitat. Yet, increases in air temperature alone ara potentially insufficient to cause stream warming, which is also influenced by a range of other factors that govern the energy balance of individual stream reaches. Here, I used long-term water temperature data from seven streams in the Krycklan Catchment Study (KCS) to ask whether there are recent trends in warming, and to evaluate how catchment properties regulate the sensitivity of streams to air temperature change during summer. Mann Kendall trend analysis at one headwater site showed that there has indeed been a warming trend in the KCS, but only during a brief time-window in early summer. Across, KCS sites, air temperature-water temperature regressions highlighted notable variation in the thermal sensitivity of streams depending on their catchment features. Finally, observations during extreme warm and dry years did not indicate strong responses in terms of stream temperature. In fact, extreme low-flow conditions seem to reduce the downstream propagation of warm lake water during these events. Collectively, my results suggest that ongoing climate changes in the boreal region have not had dramatic influences on stream temperature, although future changes occurring around the snowmelt season are likely.

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Dans les écosystèmes aquatiques, l'activité anthropique, mais aussi le contexte naturel induisent chez les organismes aquatiques des situations de stress multiples. Parmi les sources potentielles de perturbation, trois d'entre elles, d’origine chimique, ont été étudiées : contamination métallique, une contamination par un herbicide, par un mélange d’alkylphénols polyéthoxylés et enfin une contamination par un produit pétrolier. Cette démarche entre dans le cadre de la directive européenne REACh (Registration Evaluation Autorisation of CHemicals) mais aussi de la directive cadre eau DCE (directive 2000/60/CE) du parlement Européen et du Conseil établissant une politique communautaire dans le domaine de l'eau. Il s’agit en fait d'évaluer la pertinence d’une série d’indicateurs précoces de pollution (ex : biomarqueurs) afin de prédire l'effet des substances chimiques lors de contaminations chroniques ou ponctuelles du milieu aquatique. Une approche intégrée des interactions des substances ou produits sélectionnés sur la réponse génétique, protéique, cellulaire, histologique et individuelle chez la truite arc-en-ciel, Onchorynchus mykiss, a été entreprise en mésocosmes ouverts et dynamiques et en laboratoire. In vivo, une étude multimarqueurs sur des truites juvéniles femelles diploïdes a été menée à chaque exposition, de 21 ou 28 jours, et durant une période de « récupération » afin d'estimer les effets sur la physiologie des truitelles. Le mélange de nonylphénols polyéthoxylés et l’essence utilisés pour les expositions montrent ainsi des effets qui perdurent jusqu’à la fin de cette période de « récupération ». Les mésocosmes, utilisés lors de cette thèse, offrent des conditions favorables au maintien et à la croissance de truites juvéniles. (...) Dans une démarche de recherche de biomarqueurs d’effets chez une espèce modèle, transposer ces travaux chez des poissons (mâles et femelles) à des stades de développement différents pourrait ainsi permettre d’isoler les paramètres les plus pertinents, à chaque stade ou pour l’ensemble du cycle de l’espèce, afin d’apporter de nouveaux outils pour la surveillance des milieux aquatiques. / In the aquatic ecosystems, anthropic activity, but also natural environment induce several kind of stress in aquatic organisms. Among the potential sources of stress, three chemicals were studied here: a metal, a bipyridylium herbicide, a mixture of nonylphenol polyethoxylate and an oil product exposure. This study enters within the framework of the European directive REACh (Registration Evaluation Authorization of CHemicals) but also of the Directive Cadre Eau, DCE (directive 2000/60/CE) of the European Parliament. The aim is to evaluate the relevance of an early pollution indicator pool (biomarkers) in order to predict chemical substance effects during chronic exposure or after specific contaminations of the aquatic compartment. An integrated approach of the substance effects on the genetic, proteinic, cellular, histological and individual answers in the rainbow trout, Onchorynchus mykiss, were undertaken in open and dynamic mesocosms and also laboratory. In vivo, a multibiomarker study on female juvenile trout was done at each exposure, over 21 or 28 days, followed by a period of “recovery». The mixture of nonylphenol polyethoxylate and the gasoline used for the exposures thus show effects which perdurent until the end of this period of “recovery. The mesocosms used in this study offer favorable conditions for juvenile survival and growth. (...) In addition to the assessment of the measurement robustness and the biomarker relevance, we compared the data obtained in this study with the in vivo tests and those obtained using in vitro tests. This approach made possible to highlight coherent answers between in vitro the tests and in vivo markers. But in vitro tests are only one preliminary approach to quickly seek a specific toxic action. The modulation monitoring of key genes in the fish reproduction function, during a gasoline exposure, offers complementary informationabout the pollutant mode of action. We noted that the effects of the contamination on the hormonal rates were differed in time compared to the modulation of the gene transcription. In order to bring new tools for the monitoring, in a model species, of the aquatic environment,transposing this work in male and female fish at different developmental stages would enableisolating still most relevant parameters.

Thesis (Ph.D. (Zoology)) -- University of the North, 1996 / Refer to document

Research into the polyculture of finfish and crayfish has been conducted in Western Australia for over a decade now. This research was instigated out of a need to increase revenues from freshwater crayfish farmers wishing to diversify their income base with a view to increasing profitability and reducing risk. It has become clear that several key variables dictate how the polyculture system (i.e. polysystem) will perform. These include biological factors like: size of participating species, relative densities, gender, planktonic turbidity, natural feeds; and abiotic factors like: light intensity, clay turbidity, floating cages for segregation, water quality, and habitat/shelter complexity. Many of these factors can be controlled / adjusted by the manager of the polysystem to maximise performance, production and profitability.While much of the research to date has focussed on the marron (Cherax tenuimanus) industry, it is also important to realise that an understanding of these factors can also assist other crayfish polysystems, like integrated agri-aquaculture systems containing yabbies (Cherax albidus). Some of the factors that influence how the system will perform may become more prevalent, like suspended clay turbidity and the associated role of light intensity in species interactions, or shelter complexity and the resulting choice of shelter material. But overall, they are the same basic variables and we must understand how they affect the particular multi-species system that we are dealing with. There is a lot to be learned from the literature on how these variables affect multi-species aquatic environments in the wild. Perhaps aquaculturists have not considered this enough in the past. Some farmers seem to believe that these variables are different JUST because it is a culture system. This is not true. / The variables will take on different levels in a culture system (i.e. a manager will stimulate turbidity, provide artificial feeds, stock different sizes, and supply particular types of shelter) BUT the actual variables themselves (e.g. food, density, light, shelter) are basic to ALL aquatic ecosystems. Other researchers have looked at important factors like density, gender, and light intensity / turbidity in crayfish polysystems - but the issue of habitat complexity and the role of shelter has not been adequately addressed. This thesis will investigate some basic questions about shelter and endeavour to apply them to crayfish polysystems, with the emphasis on marron (C. tenuimanus) and yabbies (C. albidus) because these are the two most commercially important species of crayfish in Western Australia. Importantly, it should be noted that due to the invasive nature of yabbies, and their apparent ability to displace native marron in the wild, findings will be related to yabby-marron competition / displacement where relevant. We need to know many things about shelter: what type is best in a multi-species system? Should the shelter size match the crayfish size? Do marron have different requirements for shelter than yabbies? Does it matter who gets first use of a shelter (i.e. prior residence effect)? Can we learn about crayfish shelter requirements by examining the behaviour / plasticity of crayfish species? If crayfish are stocked with finfish and they retreat into shelter as a predator-avoidance measure, is the complexity important given that their densities will be higher? If densities of crayfish inside shelters are higher in polysystems, will cannibalism be a concern, particularly when conditions are right for moulting? Does visual recognition and / or chemo-detection of a predator affect the shelter usage by marron or yabbies? / Does temperature affect shelter usage behaviour for a burrowing species like yabbies? Shelter is an important factor in the life history of a freshwater crayfish and an understanding of its influence on different species is important for maximising system performance. Crayfish are categorised depending on their ability to construct shelters (i.e. burrows). Yabbies have evolved in systems with fluctuating water quality and many predators and, as such, have learned to burrow (to escape drought and also to escape predators). Marron, on the other hand, are a non-burrowing native crayfish species that have existed with relatively few predators in the South-West. As a result, marron are less capable of modifying their behaviour when confronted with a predator (i.e. low behavioural plasticity). Species with high plasticity, like yabbies, are more capable of adapting to new environments, because they can change their behaviour to increase their chance of survival. Therefore we can expect yabbies and marron to utilize habitats differently and we should compare these behaviours as a basis to developing management strategies. This type of knowledge may also assist with managing the translocation and spread of yabbies in the wild and their displacement of native marron.Within multi-species systems, the physical structure of shelter plays an important role inprotecting crayfish and the perfect shelter would not only provide safety from co-stocked finfish, but also from conspecific cannibalism. Given the different life histories and behaviours, it is probable that both species of crayfish will have different refuge requirements.Over the course of this four-year investigation, trials were conducted in four culture systems (72L aquariums, 300L circular tanks, 80t mesocosm tank, and 720m2 earthen ponds) using marron and yabbies as the species of interest. / Silver perch and Murray cod were chosen as the finfish species of interest as they appear to have the highest aquaculture potential for native freshwater finfish in Australia at the present time. Further, both of these fish have been documented as potential predators of crayfish, resulting in a challenge to understand the role of shelter in minimising the negative effects of fish-crayfish interactions within a polysystem. This study has confirmed that shelter plays a critical role in multi-species system dynamics. In the case of polysystems, it will affect both interspecific and intra-specific interactions, ultimately governing production and profitability, along with the other, previously defined factors. This means that the manager of a polysystem can influenceproductivity by understanding: a) the behavioural characteristics and biology of the crayfish; b) the feeding biology of the finfish; and c) the system variables (both biotic and abiotic) that will affect the overall well being of the fish and crayfish. In the case ofshelter, the manager should understand the available shelter types, the appropriatedensities, the importance of matching complexity to the crayfish size, and the prior residence effect when choosing a timing strategy for stocking and harvesting. Prior residence increased resource holding potential for both marron and yabbies in the short term. In fact, prior residence was a stronger determinant of successful sheltering than crayfish gender or species. However, in longer-term trials the physical size of the crayfish (larger animals evicted smaller animals) and reproductive status (berried females were successful at evicting all other crayfish) were more important factors in determining successful shelter acquisition, although the temporal variations (i.e. growth and release of young) complicate the issue. / When stocking crayfish of different sizes, and in polysystems, the correct size of shelter becomes critical, as smaller individuals will be forced to leave over-sized shelter and locate a shelter commensurate with their own body size to avoid predators. This is relevant to crayfish nurseries where complex habitat is paramount for juvenile cohorts that display variation in sizes and gender. The expansion of crayfish polyculture holds considerable promise; however, furtherinvestigations are required into shelter complexity within floating fish cages, shelter types and arrangement of shelters within ponds (for increased production and ease-of-harvesting), potential of yabbies in polyculture (comparison of monosex and hybrid strains), and the impact of shelter on escape behaviour of marron in a polysystem.