Thesis (MSc)--Stellenbosch University, 2012. / ENGLISH ABSTRACT: Plant growth promoting substances (PGPS) are emerging as useful tools in the investigation of important plant growth traits. Two PGPS, smoke-water derived from burning plant material and a synthetic strigolactone analogue, GR24, have been reported to regulate a wide variety of developmental and growth processes in plants. These PGPS are beginning to receive considerable attention in the area of improving plant biomass yield and production. Variation in growth between plants is a major impediment towards the complete understanding of the intrinsic processes that control biomass production. Callus cultures of the model plant Arabidopsis thaliana could overcome some of these hindrances. However, the suitability of these callus cultures as a model system for plant biomass production must be established first. This study aimed at using A. thaliana callus cultures as a platform to study the plant growth promoting activities of smoke-water and GR24. The first part of this study was conducted to develop an optimal protocol for inducing A. thaliana callus formation. Wild-type A. thaliana Col-O, as well as strigolactone deficient and insensitive mutants (max1-1, max2-1, max2-2, max3-9 and max4-1) were cultured for callus induction. Hypocotyl and leaf explants were cultured onto MS media supplemented with different hormone concentrations of 2,4-D and kinetin (2:2 mg/L 2,4-D:kinetin and 0.5:0.05 mg/L 2,4-D:kinetin). Both media proved suitable for callus induction of all genotypes, with max1-1 showing the highest efficiency (83.33% and 92.22%) of callus induction. Calli were then used as a platform for future investigations into the effects of smoke-water and GR24. Secondly, this study examined the effects of smoke-water and GR24 on wild-type A. thaliana Col-O callus. Basic physiological studies were conducted to determine if these two compounds would positively affect callus growth, as was shown in previous studies using whole plants. Calli cultivated on MS media containing the two different hormone concentrations were transferred onto the same fresh MS medium, supplemented with either smoke-water or GR24. Growth promotion by smoke-water and GR24 in calli was characterized by a significantly increased mass (biomass). Calli were additionally transferred onto MS medium containing either auxin only or kinetin only and supplemented with GR24 or smoke-water. In the auxin only system, increased mass was recorded for both GR24 and smoke-water treatments, while these two compounds seemed to reduce growth in the kinetin only system. The positive growth stimulatory effect observed for the auxin only system could be attributed to the synergistic relationship between auxin and strigolactones, whilst the reduced mass in the latter system could be due to the antagonistic interaction between strigolactones and cytokinins. Finally, this study has discovered a dual role of strigolactones in biomass accumulation and adventitious root formation for Arabidopsis thaliana callus. On an auxin- and cytokinin-free MS medium supplemented with GR24, calli of Arabidopsis thaliana strigolactone deficient mutants (max1-1 and max4-1) and the wild-type Col- O, but not the strigolactone response mutant (max2-2), showed enhanced biomass accumulation. In addition to this, the max4-1 mutant and wild-type Col-O demonstrated enhanced adventitious rooting, which was not apparent in max2-2. Together these data suggested that the biomass accumulation and the adventitious rooting activities of GR24 in Arabidopsis thaliana calli are controlled in a MAX2- dependent manner. The interaction between strigolactone, auxin and cytokinin signalling pathways in regulating these responses appears to be complex. Gene expression profiling showed regulation of stress-related genes such as B-box transcription factors, CALCINEURIN B-LIKE and RAP4.2 Genes encoding hormones associated with stress (ABA, ethylene) and defence mechanisms (JA) were upregulated. Expression of stress related genes indicated clues on some kind of stress mediation that might be involved during the regulation of the rhizogenic response. Conversely, smoke-water treatment could not enhance the biomass of the calli and nor could it induce adventitious rooting in the absence of auxin and cytokinin. This observation strongly emphasized the distinct roles of these two compounds, as well as the importance of the interaction and ratio of auxin and cytokinin in callus growth. This study has demonstrated a novel role of strigolactones in plant growth and development, i.e. enhancement of biomass production in callus cultures. Secondly the enhanced adventitious rooting ability is in agreement with recently published literature on the role of strigolactones in regulating root architecture. In vitro callus production is advantageous to plant sciences. It creates an opportunity for increasing plant material for cultivation and offers the use of cell cultures that accurately mimic specific growth responses. It could greatly contribute to the study of intricate regulatory and signalling pathways responsible for growth and development in plants. Because the regulation of plant biomass production is very complex and the molecular mechanisms underlying the process remain elusive, it is of paramount importance that further work be done in order to gain more in-depth insights and understanding of this aspect and subsequently improve efficiency and returns when applying biotechnology tools on commercially important crop plants. / AFRIKAANSE OPSOMMING: Verbindings wat plantgroei bevorder (PGBV) het as nuttige alternatief ontstaan om plant groei te ondersoek. Rook-water, afkomstig van verbrande plant material, en ‘n sintetiese strigolaktoon analoog, GR24, wat ‘n α, β-onversadigde furanoon funksionele groep in gemeen het, is vir die regulering van ‘n wye verskeidenheid ontwikkelings- en groei prosesse in plante verantwoordelik. Tans ontvang hierdie PGBVs aansienlik aandag in die area van die verbetering van plant biomassa opbrengs en -produksie. Die variasie in groei tussen plante is ‘n groot hindernis om die intrinsieke prosesse wat biomass produksie beheer, volledige te verstaan. Deur gebruik te maak van kallus kulture van die model plant Arabidopsis thaliana kan van hierdie hindernisse oorkom word. Tog moet die geskiktheid van kallus kulture as ‘n model sisteem vir plant groei biomass produksie eers gevestig word. Die doel van hierdie studie was om A. thaliana kallus kulture as ‘n platform vir die studie van die plantgroei bevorderingsaktiwiteite van rook-water en GR24 te gebruik. Die eerste deel van die studie is uitgevoer ten einde ‘n optimale protokol vir die induksie van A. thaliana kallus produksie te ontwikkel. Wilde tipe Col-0, asook strigolaktoon afwesige en onsensitiewe mutante (max1-1, max2-1, max2-2, max3-9 en max4-1) is vir kallus induksie gekultiveer. Hipokotiel en blaar eksplante is op MS medium wat verskillende hormoon konsentrasies van 2,4-D en kinetien (2:2 mg/L 2,4-D:kinetien en 0.5:0.05 mg/L 2,4-D:kinetien) bevat, oorgedra. Beide media was geskik vir kallus induksie van al die genotipes, met max1-1 wat die hoogste effektiwiteit (83.33% en 92.22%) van kallus induksie getoon het. Kalli is daarna as ‘n platform vir toekomstige navorsing i.v.m die effek van rook-water en GR24 gebruik. Tweedens ondersoek die studie die effek van rook-water en GR24 op wilde tipe Col-0 kallus. Basiese fisiologiese studies is uitgevoer om te bepaal of die twee verbindings ‘n positiewe effek op kallus groei toon soos aangedui in vorige studies waar intakte plante gebruik is. Kallus wat op MS medium wat die twee verskillende hormoon konsentrasies bevat gekultiveer was, is op dieselfde vars MS medium, wat addisioneel óf rook-water óf GR24 bevat, oorgedra. Die stimulering van groei van kalli deur rook-water en GR24 is deur ‘n merkwaardige toename in massa (biomassa) gekenmerk. Kallus is additioneel op MS medium wat slegs óf ouksien óf kinetin bevat (gekombineer met GR24 of rook-water behandeling), oorgedra. In die sisteem waar slegs ouksien toegedien is, is ‘n toename in massa waargeneem vir beide GR24 en rook-water behandelinge. In teenstelling hiermee, het die twee verbindings in die sisteem waar slegs kinetin toegedien is, ‘n vermindering in groei meegebring. Die positiewe groei stimulerende effek wat waargeneem is vir die sisteem waar slegs ouksien toegedien is, kan toegedra word aan die sinergistiese verhouding tussen die ouksien en strigolaktone; terwyl die verlaagde massa in die laasgenoemde sisteem aan die antagonistiese interaksie tussen strigolaktone en sitokiniene toegedra kan word. Laastens het hierdie studie het ‘n gelyktydige rol van strigolaktone vir biomassa akkumulasie en bywortelvorming in Arabidopsis thaliana kallus ontdek. Kallus van A. thaliana strigolaktoon afwesige mutante (max1-1 en max4-1) en die wilde tipe Col-0 (maar nie die strigolaktoon reagerende mutant (max2-2) het op ‘n ouksien en sitokinien vrye MS medium wat GR24 bevat ‘n verhoogde biomassa akkumulasie getoon. Die max4-1 mutant en wilde tipe Col-0 het verhoogde bywortelvorming getoon, wat nie so opmerklik by max2-2 was nie. Hierdie data het tesame voorgestel dat die biomassa akkumulasie en die bywortelvormingsaktiwiteite van GR24 in Arabidopsis thaliana kallus op ‘n MAX2-afhanklike wyse beheer word. Die interaksie tussen strigolaktoon, ouksien en sitokinien sein transduksie paaie vir die regulering van hierdie reaksies blyk kompleks te wees. Die geen uitdrukkingsprofiel het die regulering van stres verwante gene soos B-boks transkripsie faktore, CALCINEURIN B-LIKE en RAP4.2, getoon. Gene wat vir hormone wat aan stres (ABA, etileen) en verdedigingsmeganismes (JA) verwant is, is opgereguleer. Die uitdrukking van stress verwante gene dui op tekens van ‘n ander tipe stres bemiddeling wat dalk by die regulering van die risogeniese reaksie betrokke kan wees. In teenstelling, rook water behandeling kon nie die kallus biomassa verhoog nie en dit kon ook nie die bywortelingvorming in die afwesigheid van ouksien en sitokiniene induseer nie. Hierdie waarneming is ‘n sterk bevestiging vir die uitsonderlike rol van die twee verbindings, asook die belang van die interaksie en verhouding van ouksien en sitokinine vir die groei van kallus. Hierdie studie toon op ‘n nuwe rol van strigolaktoon in plant groei en ontwikkeling, d.w.s die verhoogde biomassa produksie in kallus kulture. Tweedens, die verhoogde bywortelvormingsvermoë is in ooreenstemming met literatuur wat onlangs gepubliseer is i.v.m die rol van strigolaktone in die regulering van wortel argitektuur. Die in vitro produksie van kallus is voordelig in plant wetenskappe. Dit skep ‘n geleentheid vir die vermeerdering van plant materiaal vir kultivering en bied die gebruik van selkulture wat spesifieke groei reaksies op ‘n merkwaardige wyse akkuraat namaak. Dit kan grootliks bydra tot die studie van die delikate regulatoriese en sein transduksie paaie wat vir groei en ontwikkeling van plante verantwoordelik is. Aangesien die regulering van plant biomassa produksie baie kompleks is en die molekulêre meganismes vir die proses onbekend bly is dit van grootskaalse belang dat meer werk gedoen word om ‘n meer in diepte insig en kennis van die aspekte en gevolglike verbetering van effektiwiteit en wins te kry deur die toepassing van biotegnologiese metodes op die gewas plante wat van kommersiêle belang is.

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No. of bitstreams: 1 TeseAEM.pdf: 3699711 bytes, checksum: 3b2fdf705faaa9314eeacec123aa76fd (MD5) Previous issue date: 2017-06-09 / Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) / Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) / In aquatic environments, phytoplankton consists mostly of photosynthetic microorganisms that serve as the basis of food chains. However, besides photoautotrophy, it is widely reported in the literature that many microalgae can take up dissolved organic matter present in the environment concomitantly with the photosynthesis, a metabolic pathway known as mixotrophy. Little is known about the ecophysiology of mixotrophy in microalgae, and almost all studies are focused on the use of this metabolic pathway to increase the production of algal biomass and stimulate the production of specific biomolecules. Another important issue, considering the current anthropic activity, is that most of the contaminants eliminated in aquatic environments, such as metals and nanoparticles, affect the phytoplankton. However, so far, no ecotoxicological study involving mixotrophic metabolism was found in the literature. To better understand mixotrophy in microalgae, this work chose the chlorophycean freshwater Chlorella sorokiniana as test organism. We divided the study into two parts: the first focused on the physiological/biotechnological interest through the study of growth, photosynthetic parameters, changes in cellular volume, and production of biomolecules (proteins, carbohydrates and lipids); the second part focused on the ecotoxicological effects of cadmium (Cd) and titanium dioxide nanoparticles (NPs-TiO2). To stimulate mixotrophy, glucose (1.0 g.L-1 or 5 x 10-3 mol.L-1) was used as the organic carbon source. The results showed that during mixotrophy, the microalga C. sorokiniana presented higher population growth and production of biomolecules, such as chlorophyll a and lipids, when compared to photoautotrophic cultures. It was also observed that the photosynthetic parameters were affected by mixotrophy, although they did not interfere in the growth of the microalga, and that the presence of bacteria in the cultures acted as a stimulant factor in the production of algal biomass. Regarding the ecotoxicological effects of contaminants, microalgae in mixotrophy were more resistant to both Cd and NPs-TiO2 than those in photoautotrophy, but with changes in the biochemical composition what can affected the energy transfer in the environment. In general, we can conclude that mixotrophy should be considered in studies with phytoplankton, since aquatic environments present a myriad of organic carbon that can be used by these microorganisms. As general conclusions, we can mention that organic carbon acted as an extra source of structural carbon and energy for microalgae, not necessarily relying solely on photosynthesis to survive, so stimulating the growth and production of biomolecules of biotechnological interest, and increased cellular viability in environments contaminated with metals and nanoparticles. This study is a contribution to the understanding of mixotrophy and photoautotrophy metabolisms in a freshwater Chlorophyta with biotechnological potential. / Nos ambientes aquáticos, o fitoplâncton é formado basicamente de microrganismos fotossintetizantes que servem como base das cadeias alimentares. Entretanto, além da fotoautotrofia, é vastamente citado na literatura que muitas microalgas alimentam-se de matéria orgânica dissolvida presente no ambiente concomitantemente à realização da fotossíntese, uma via metabólica conhecida como mixotrofia. Sabe-se pouco sobre a ecofisiologia em metabolismo mixotrófico nas microalgas, sendo os estudos, em sua quase totalidade, voltados ao uso dessa via metabólica para aumentar a produção de biomassa algal e estimular a produção de biomoléculas específicas. Outra questão importante, considerando a atividade antrópica atual, é que a maioria dos contaminantes eliminados nos ambientes aquáticos, como metais e nanopartículas, são estudados em fitoplâncton sob metabolismo fotoautotrófico, não sendo encontrados trabalhos ecotoxicológicos envolvendo o metabolismo mixotrófico na literatura. Para entender melhor o metabolismo algal em mixotrofia, este trabalho escolheu a microalga Chlorophyta de água doce Chlorella sorokiniana como organismo-teste. Para melhor organizá-lo, foi dividido em duas partes: a primeira focou no interesse fisiológico/biotecnológico através do estudo do crescimento, parâmetros fotossintéticos, volume celular, e produção de biomoléculas (proteínas, carboidratos e lipídeos); a segunda parte focou nos efeitos ecotoxicológicos de cádmio (Cd) e de nanopartículas de dióxido de titânio (NPs-TiO2). Para estimular a mixotrofia, glicose (1.0 g.L-1 ou 5 x 10-3 mol.L-1) foi utilizada como fonte de carbono orgânico. Os resultados mostraram que durante a mixotrofia, a microalga C. sorokiniana apresentou maiores crescimento populacional e produção de biomoléculas, como clorofila a e lipídeos, quando comparada com as culturas em fotoautotrofia. Também foi observado que os parâmetros fotossintéticos foram afetados em mixotrofia, porém não interferindo no crescimento da microalga, e que a presença de bactérias pode ter atuado como fator estimulante na produção de biomassa algal. Em relação aos efeitos ecotoxicológicos dos contaminantes, as microalgas em mixotrofia foram mais resistentes tanto ao Cd quanto às NPs-TiO2 do que em fotoautotrofia, porém com mudanças na composição bioquímica, podendo afetar a transferência de energia nos ecossistemas aquáticos. De modo geral, podemos concluir que a mixotrofia deve ser considerada em estudos com fitoplâncton, visto que os ambientes aquáticos apresentam uma miríade de fontes de carbono orgânico para esses microrganismos. Na mixotrofia, o carbono orgânico funciona como uma fonte extra de carbono estrutural e de energia para as microalgas, não dependendo obrigatoriamente somente da fotossíntese para sobreviver, estimulando o crescimento e produção de biomoléculas de interesse biotecnológico, além de aumentar a viabilidade celular em ambientes contaminados tanto com Cd quanto com NPs-TiO2. Este estudo é uma contribuição ao entendimento dos metabolismos mixotróficos e fotoautotróficos em uma Chlorophyta de água doce com potencial biotecnológico. / CNPq: 302175/2015-6 / FAPESP: 2014/15894-0

This study evaluated the effectiveness of chiselling and elemental sulfur fertilization in improving an upland and a swale range site with fine loamy, carbonatic, typic calcixeroll soils in the Ait Rbaa Perimeter of central Morocco. Ponding infiltration, soil water content on a mass basis of the 0- to 10-cm and 10- to 20-cm soil layers, peak season biomass production, and botanical composition were monitored during the two growing seasons following the treatments (1984/85 and 1985/86). Chiselling significantly improved infiltration on both sites, although the improvement was greater on the finer and less stony swale site, where chiselling resulted in more stable ridges. The land treatment also increased the average water content by weight of the 0- to 20-cm soil layer. The increase was more frequent on the upland site and most pronounced on its o- to 10-cm surface soil layer. In the chiselled treatments, average soil water content decreased with soil depth on the upland site while it increased on the swale site because of differential furrow stability and soil texture. Both the average infiltration rates of 5 cm of water and the average water content varied with sampling time, although generally in opposite directions. The application of elemental sulfur at the rates of 0, 30, and 60 kg ha-1 did not significantly affect any of the measured variables. Average peak season biomass production was 11% greater with chiselling. Chiselling also positively affected botanical composition on the upland site by depressing average forb proportion and increasing legume ratio in the first growing season. The gain in biomass does not seem to be high enough to strongly recommend chiselling in the Ait Rbaa Perimeter before performing an economic analysis of the operation.

This study aimed at developing allometric equations for the estimation of aboveground biomass of black willow and eastern cottonwood and determine biomass production by these species under several planting spacing and harvest frequency combinations. Logarithmic model with dbh and tree height was the best fitting model for individual tree aboveground biomass estimation of both species. At area level, logarithmic models with stand age, dominant height, and planting density produced the best results. Mixed-effects modeling showed statistically significant effects of harvest frequency for eastern cottonwood but not for black willow. Overall, we conclude that, biomass production of black willow and eastern cottonwood would play a critical role in the fulfillment of the wood energy demands and biomass yields can be enhanced by considering management factors during plantation. These findings will be useful to forest owners in Lower Mississippi Alluvial Valley for estimating biomass without destructive sampling and have optimal biomass production.

Size-dependent differences between individuals in size-structured organisms have fundamental effect on population and community dynamics. Intraguild predation (IGP) is one specifically interesting constellation that often arises when two size-structured populations interact. Ontogenetic bottlenecks that determine population size-structure are affected by both population intrinsic as well as population extrinsic factors, and are therefore context-dependent. Surprisingly, size-structured IGP systems have mainly been investigated theoretically and especially long-term empirical studies are widely lacking. In this thesis I investigate empirically how habitat complexity, interaction strength, and stage-specific resource availabilities affect population processes and their effects on the dynamics of a size-structured IGP system. I conducted multi-generation experiments in a size-structured IGP system, with the Least Killifish (Heterandria formosa) as IG prey and the Common Guppy (Poecilia reticulata) as IG predator. With no alternative resource next to the shared resource, IG predator and IG prey could not coexist. Weak interactions only increased IG prey and IG predator persistence times and observed exclusion patterns depended on habitat complexity. An alternative resource for either the juvenile IG predator or the juvenile IG prey on the other hand promoted coexistence. However, this coexistence was context-dependent. Ontogenetic bottlenecks played a central role in the dynamics of the size-structured IGP system in general. In the final study I show that an ontogenetic bottleneck can, through changes in stage-specific resource availabilities, be affected in a way that leads to increased trophic transfer efficiency with potential effects on higher trophic levels. Overall, the results emphasize importance of the broader context in which size-structured communities are embedded. Especially, when managing natural communities it is important to account for the combined effects of size-structure, stage-specific resource availabilities, and habitat structure. Specifically, when managing species that connect habitats or ecosystems all life-stages’ environmental conditions must be consider in order to ensure strong predictive power of tools used for ecosystem management planning.

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Thesis (MScAgric)--Stellenbosch University, 2013. / ENGLISH ABSTRACT: Soil texture, plant available water and fertilizer N would influence growth, biomass production and antimicrobial properties of locally used medicinal plants.This research was aimed at investigating how various soil textures (loamy sand, sandy loam and loam) with varying amounts of plant available water (PAW) and nitrogen fertilizer rates would influence the biomass production and antimicrobial properties of Mentha longifolia L. In this research, a two-way factorial experiment was used. It was produced by 3 X 3 factors, viz. three different soil textures (loam, sandy loam and loamy sand) and three levels of PAW in the first trial (0 %, 50 % and 90 % depletion of PAW) and three levels of N fertilizer rates in the second trial. The elemental fertilizers KNO3, K2SO4, KH2PO4, KCl Ca (NO3)2.2H2Oz, CaSO4.2H2O and Mg SO4.7H2O were used to prepare a nutrient solution for fertigation to meet 0Kg ha-1, 150Kg ha-1 and 250Kg ha-1 fertilizer N. This was replicated four times. The experiment was conducted in a tunnel. From the first trial the highest biomass production was obtained from 0% depletion of PAW treatments whereas 50% and 90% depletion of PAW matched each other at lower biomass productions. In terms of soil texture a higher biomass production was gained from loamy sand followed by loam and sandy loam. In the second trial similar influences of soil texture were evident and the significant biomass productions were highest, intermediate and low from 250Kg ha-1, 150Kg ha-1 and 0Kg ha-1 of fertilizer N, respectively. Accordingly, Mentha longifolia L revealed a minimal bacterial inhibition activity at 20g 100ml-1 against Staphylococcus aureus (gram positive bacteria) under Minimum Inhibitory Concentration assay–susceptibility test. It was therefore concluded that soil texture does influence biomass production. In a like manner, the PAW had a significant impact on the total biomass production. An increase in N fertilizer increased vegetative biomass production. Plant material obtained from Mentha longifolia L has antimicrobial properties. Medically the plant can be used to combat Staphylococcus aureus – a major and ubiquitous pathogen for humans. The significance of this study is thus that it will benefit and help the medical community and future research as the guide to sustainable production and utilization of Mentha longifolia L. / AFRIKAANSE OPSOMMING: Grondtekstuur, plant beskikbare water en kunsmis N sal plantegroei, biomassaproduksie en antimikrobiese-eienskappe van plaaslike medisinale plante affekteer. Die doel van die navorsing was om die effek van grondteksture, plant beskikbare water (PAW) en stikstof op die biomassaproduksie en antimikrobieseeienskappe van Mentha longifolia L. te bestudeer. 'n Tweerigting-faktoriaal-eksperiment is gebruik deur drie verskillende grondteksture (leem, sanderige-leemgrond en leemsand) en drie vlakke van PAW in die eerste geval (0%, 50% en 90% uitputting van PAW) en drie vlakke van N-kunsmistoedienings in die tweede geval. Die basiese kunsmis KNO3, K2SO4, KH2PO4, KClCa(NO3)2.2H2Oz, CaSO4.2H2O en MgSO4.7H2O is gebruik in so „n mate dat 0Kg ha-1, 150kg ha-1 en 250 kg ha-1 Nas sproeibemesting toegedien is. Dit is vier keer herhaal. Die eksperiment is uitgevoer in 'n tonnel. Die hoogstebiomassaproduksie is van die eerste geval verkry van 0% uitputting van PAW behandelings, terwyl 50% en 90% uitputting van PAW ooreenstem met mekaar op laer biomassaproduksies. In terme van grondtekstuur is 'n hoër biomassaproduksie verkry in leemsand gevolg deur leem en sanderigeleem. In die tweede geval is soortgelyke invloede van grondtekstuur duidelik en die beduidende biomassaproduksies was die hoogste, intermediêre en laagste van 250 kg ha-1, 150kg ha-1 en 0Kg ha-1 van kunsmis N, onderskeidelik. Gevolglik, Mentha longifolia L onthul 'n minimale bakteriese inhibisie aktiwiteit op 20g 100ml-1 teen Staphylococcus aureus (gram positiewebakterieë) onder Minimum inhiberende konsentrasie assay-vatbaarheidtoets. Die gevolgtrekking is dus dat grondtekstuu biomassaproduksie beïnvloed. In 'n soortgelykewyse, het PAW 'n beduidende impak op die totale biomassaproduksie. 'n Toename in N-kunsmis verhoog vegetatiewe biomassaproduksie. Plantmateriaalverkry van Mentha longifolia L het antimikrobiale-eienskappe en kan as Die medisinale plante gebruik word om Staphylococcus aureus te bestry - 'n groot en alomteenwoordige patogeen in die mens. Die belangrikste bydrae van die navorsing is die bydra wat dit tot die mediesegemeenskap gemaak het. Die studie het ook riglyne gestel vir toekomstige navorsing vir volhoubare produksie van Mentha longifolia L. / NRF and DST for the funding of this study through the Seboka Project

As propriedades físicas do solo são preponderantes para a qualidade e produtividade da cultura da batata. Assim, o objetivo do presente trabalho foi avaliar algumas propriedades físicas do solo e a produtividade e qualidade dos tubérculos de batata. O experimento foi instalado em áreas de produção de batata na Chapada Diamantina (BA), de abril a agosto de 2005. O solo foi preparado pelo sistema convencional e pelo sistema alternativo MAFES, ambos associados ou não com a aplicação de Microrganismos Eficazes (EM). Foram avaliadas: a densidade do solo, a estabilidade de agregados, a resistência do solo à penetração, a taxa de infiltração de água e a retenção de água no solo. Também foi avaliada a alteração dessas propriedades do solo em relação à área antes do preparo, que estava sob pastagem de Brachiaria brizantha. A massa de torrões e touceiras colhidas juntamente com os tubérculos, bem como os danos mecânicos verificados durante a colheita mecanizada e a porcentagem de tubérculos com danos causados por larva alfinete, sarna e podridões foram quantificados. A produtividade nos diferentes tratamentos foi avaliada dentro da classificação comercial. Em relação ao pasto, os preparos convencional e MAFES alteraram a maioria das propriedades físicas avaliadas. Na área preparada pelo sistema MAFES foi observado, em relação ao preparo convencional, menor resistência à penetração em profundidades de 20 a 45 cm e entre os camalhões. A taxa de infiltração de água foi semelhante entre as áreas preparadas pelos dois sistemas, porém no sistema convencional a infiltração é mais superficial ocorrendo de forma lateral ao longo do perfil. No sistema MAFES a infiltração ocorreu verticalmente no perfil do solo. Menor porcentagem de tubérculos com danos mecânicos foi obtida na área preparada pelo sistema MAFES, devido, principalmente, a menor massa de torrões e touceiras colhidas juntamente com os tubérculos nessa área. A aplicação de EM teve pouca influência nas propriedades físicas do solo, mas propiciou condições que favoreceram o ataque de larva alfinete e sarna aos tubérculos. Apesar da utilização de EM ter reduzido a produção de tubérculos na área preparada pelo sistema MAFES, a produtividade e qualidade dos tubérculos nessa área foi superior a da área preparada pelo sistema convencional. / The physical soil properties have a relevant role on the yield and quality of potato crop. Thus, the purpose of the present research was to evaluate the effects on some soil physical properties on productivity and quality of potato tubers. The trial was set up in a commercial potato production field located in the Chapada Diamantina, BA, from April to August, 2000. Two distinct soil preparation systems (conventional and MAFES system), either associated or not with application of EM, have been trialed. The following soil properties were evaluated: bulk density, aggregate stability, soil penetration resistance, soil water retention and water infiltration rate. In addition, were evaluated the changes of such soil properties in comparison with the area cultivated with the grass Brachiaria brizantha, prior soil preparation. Other evaluations were performed such as the clod mass and clump of roots harvested together with potato tubers, the level of damage to the tubers caused by mechanical harvesting, and the amount of tubers affected by potato tuber moth, rots, and common scab. The yields of the different treatments were evaluated and tubers graded according to commercial patterns. Compared to the grass, both conventional and MAFES soil preparation systems have changed the physical soil properties studied. MAFES system outperformed the conventional preparation giving lesser resistance to penetration at 20 to 45 cm deep and between hills. The water infiltration rate was similar for both soil preparation systems; however for the conventional system the infiltration pattern is superficial occurring laterally in the soil profile. Regarding MAFES systems, the infiltration occurred vertically. The area prepared MAFES system also gave a fewer percentage of tubers exhibiting mechanical damage, due to smaller clod mass and clump of roots harvested together with potato tubers. EM application did not benefit physical soil properties, however influenced a higher attack of potato tuber moth and common scab. Although the yield decrease in the area prepared with MAFES system when the EM was applied, in this area the productivity and tuber quality outperformed the conventional system.

As propriedades físicas do solo são preponderantes para a qualidade e produtividade da cultura da batata. Assim, o objetivo do presente trabalho foi avaliar algumas propriedades físicas do solo e a produtividade e qualidade dos tubérculos de batata. O experimento foi instalado em áreas de produção de batata na Chapada Diamantina (BA), de abril a agosto de 2005. O solo foi preparado pelo sistema convencional e pelo sistema alternativo MAFES, ambos associados ou não com a aplicação de Microrganismos Eficazes (EM). Foram avaliadas: a densidade do solo, a estabilidade de agregados, a resistência do solo à penetração, a taxa de infiltração de água e a retenção de água no solo. Também foi avaliada a alteração dessas propriedades do solo em relação à área antes do preparo, que estava sob pastagem de Brachiaria brizantha. A massa de torrões e touceiras colhidas juntamente com os tubérculos, bem como os danos mecânicos verificados durante a colheita mecanizada e a porcentagem de tubérculos com danos causados por larva alfinete, sarna e podridões foram quantificados. A produtividade nos diferentes tratamentos foi avaliada dentro da classificação comercial. Em relação ao pasto, os preparos convencional e MAFES alteraram a maioria das propriedades físicas avaliadas. Na área preparada pelo sistema MAFES foi observado, em relação ao preparo convencional, menor resistência à penetração em profundidades de 20 a 45 cm e entre os camalhões. A taxa de infiltração de água foi semelhante entre as áreas preparadas pelos dois sistemas, porém no sistema convencional a infiltração é mais superficial ocorrendo de forma lateral ao longo do perfil. No sistema MAFES a infiltração ocorreu verticalmente no perfil do solo. Menor porcentagem de tubérculos com danos mecânicos foi obtida na área preparada pelo sistema MAFES, devido, principalmente, a menor massa de torrões e touceiras colhidas juntamente com os tubérculos nessa área. A aplicação de EM teve pouca influência nas propriedades físicas do solo, mas propiciou condições que favoreceram o ataque de larva alfinete e sarna aos tubérculos. Apesar da utilização de EM ter reduzido a produção de tubérculos na área preparada pelo sistema MAFES, a produtividade e qualidade dos tubérculos nessa área foi superior a da área preparada pelo sistema convencional. / The physical soil properties have a relevant role on the yield and quality of potato crop. Thus, the purpose of the present research was to evaluate the effects on some soil physical properties on productivity and quality of potato tubers. The trial was set up in a commercial potato production field located in the Chapada Diamantina, BA, from April to August, 2000. Two distinct soil preparation systems (conventional and MAFES system), either associated or not with application of EM, have been trialed. The following soil properties were evaluated: bulk density, aggregate stability, soil penetration resistance, soil water retention and water infiltration rate. In addition, were evaluated the changes of such soil properties in comparison with the area cultivated with the grass Brachiaria brizantha, prior soil preparation. Other evaluations were performed such as the clod mass and clump of roots harvested together with potato tubers, the level of damage to the tubers caused by mechanical harvesting, and the amount of tubers affected by potato tuber moth, rots, and common scab. The yields of the different treatments were evaluated and tubers graded according to commercial patterns. Compared to the grass, both conventional and MAFES soil preparation systems have changed the physical soil properties studied. MAFES system outperformed the conventional preparation giving lesser resistance to penetration at 20 to 45 cm deep and between hills. The water infiltration rate was similar for both soil preparation systems; however for the conventional system the infiltration pattern is superficial occurring laterally in the soil profile. Regarding MAFES systems, the infiltration occurred vertically. The area prepared MAFES system also gave a fewer percentage of tubers exhibiting mechanical damage, due to smaller clod mass and clump of roots harvested together with potato tubers. EM application did not benefit physical soil properties, however influenced a higher attack of potato tuber moth and common scab. Although the yield decrease in the area prepared with MAFES system when the EM was applied, in this area the productivity and tuber quality outperformed the conventional system.

L’étude du cycle du carbone (C) dans les écosystèmes terrestres est fondamentale afin de comprendre leur rôle dans le cycle du carbone ainsi que les répercussions du changement climatique sur ces écosystèmes. L'objectif général de la thèse qui est de faire un suivi intra-annuel de l’allocation du C au sein de différents écosystème terrestre (forêt et prairie), se place dans ce contexte. Dans un premier temps les efficiences de production de biomasse aérienne (aBPE, rapport entre les quantités de carbone stockées dans la biomasse aérienne et absorbées) sont calculées pour des intervalles de temps réduits, du mois à la semaine selon l’écosystème (forêt et prairie). Dans un second temps, une estimation plus précise de l'allocation du carbone en forêt a été effectuée, en suivant la formation de certains composés structuraux (hémicelluloses et cellulose+lignine). Un possible lien entre la variation de cette allocation selon les conditions climatiques a été étudiée. Les efficiences correspondantes ont également été calculées mensuellement pour avoir une idée plus précise du stockage durable du C dans cet écosystème. Une comparaison avec la prairie a été réalisée en termes d’aBPE afin d'analyser les capacités respectives des 2 écosystèmes à s'adapter aux changements climatiques et à jouer un rôle dans la mitigation des gaz à effet de serre. Dans le cadre de l'Observatoire Pérenne de l'Environnement, deux écosystèmes voisins situés en Meuse (55) ont été instrumentés dans le but de mesurer en continu les échanges de CO2 à l’interface couvert‐atmosphère, ainsi que les conditions micrométéorologiques dans lesquelles ces échanges se produisent. De plus, un suivi régulier du développement des écosystèmes a également été réalisé / The study of the carbon (C) cycle is important in terrestrial ecosystems (forest, grassland) in order to understand their behavior, their role in the C cycle and also the impact of climate change on them. The general study of this thesis which is to monitor the intra-annual allocation of C into different terrestrial ecosystem (forest and grassland), lays within this context. Firstly we calculated aboveground biomass production efficiencies (aBPE, ratio between the quantity of C stored into the aboveground biomass and absorbed) intra-annually, weekly or monthly depending on the ecosystem (grassland and forest respectively). Secondly a more precise assessment of the C allocation in forest was made by analyzing the formation of structural C compounds (hemicelluloses and cellulose + lignins). A possible link between the variability of these allocations and climate was studied. The corresponding efficiencies were then calculated monthly in order to have a better idea of the sustainable C storage in this ecosystem. A comparison with a grassland in term of aBPE was then realized in order to analyze the adaptation capacity of each ecosystem to climate change and to play a role in the mitigation of GHG. Two neighboring ecosystems located in Montiers-sur-Saulx and Osne-le-Val were equipped, as part of the Observatoire Pérenne de l’Environnement (OPE), to measure continuously the CO2 exchange between land cover and atmosphere and the micrometeorological conditions in which these exchanges happen. A regular monitoring of those ecosystems development (biomass, leaves area, senescence) was also made