Life history theory assumes that correlations among fitness-related life history traits should be negative among individuals, reflecting resource allocation constraints among traits such as growth and reproduction. These traits trade off because they cannot be simultaneously maximized in individuals facing finite resource acquisition. Positive correlations among traits that are expected to be negative (e.g. between energetically costly traits) have been regularly observed, however, and have usually been ascribed to genetic or resource acquisition differences. In the freshwater zooplankton Cladoceran Daphnia, positive correlations have been particularly well documented even when genetic and environmental variation have been controlled. The sign of these correlations represent a problem for life history theory, which is underpinned by the notion of universal and unavoidable costs associated with investing in a given trait. It has been suggested, however, that costs vary with environment and thus can change the sign of a correlation. A change in correlation sign over an environmental gradient may indicate that the assumed universality of costs and constraints are not as universal as expected by life history theory. Few life history experiments have examined traits in multiple environments, and fewer have done so while controlling resource acquisition and genetic variation. Here I ask whether the positive genetic correlations among somatic growth rate, egg production rate, and longevity are present in the face of equal ingestion, clonal individuals, and a finely resolved gradient of food quality, an environmental factor that frequently affects Daphnia. I partition trait covariation into genetic and residual, or environmental, sources. All resulting genetic correlations were non-significant. Residual correlations trended from significantly positive to negative between longevity and growth rate and remained near zero between longevity and egg rate. The residual correlation between growth and reproduction, two expensive traits, displayed significantly positive residual correlations across the food quality gradient remained significantly positive. Given the experimental controls in place, I suggest that differences in individual ontogeny may give rise to differential resource utilization or assimilation efficiency. This may be a mechanism for differential resource acquisition in the absence of ingestion variation. Additionally, the different ways genetic and residual correlations change over an environmental gradient may provide insight on one manner by which genotypes might coexist and provide a candidate explanation for the second paradox of the plankton. / Thesis (Master, Biology) -- Queen's University, 2014-03-31 07:01:21.774

13C NMR spectroscopic analysis was carried out to clarify the formed hydrate structure in specific conditions on hydrate phase diagram of ternary methane, neohexane, and water system. The obtained NMR spectra at three different conditions suggested that both structure I and H were formed simultaneously and coexisted at 273.6 K and 50 bar. But, for both conditions of 273.6 K, 25 bar and 283.1 K, 50 bar the formed hydrate was identified as structure H only. These results showed that the pure CH4 hydrate of structure I was formed and coexisted with mixed CH4+neohexane hydrate of structure H in low temperature and high pressure region after passing through the phase boundary of pure CH4 hydrate. We have examined the structure coexistence at 273.6 K and 50 bar with other structure H formers of isopentane, methylcyclopentane, and methylcyclohexane. In case of isopentane, the obtained NMR spectrum showed that structure I and H coexisted and the amount of methane molecules in structure I was two times as many as in cages of structure H. However, there were no resonance lines of structure I when methylcyclohexane formed structure H with methane molecules.

The invasion and succession in cities is a phenomenon that affects the functions of thebazaar. Heavy traffic in downtown areas, air pollution in cities, the transformation of thestructure of economic activities, the flow of immigrants on the market, the transfer of certainfunctions of the bazaar to commercial companies and etc all this has created problems forthe bazaar. In the present decades, "Bazaar" has faced a new and distinguishable rival in Iran.Every day "Shopping Centers" are spreading all over regions in Iranian cities. They are as asymbol of the extension of consumerism and the occurrence of a consumer society andglobalization. These places represent youth subcultures and cultural challenges against thehegemony at national level. Will the bazaar tolerate and survive these changes, or has italready been eliminated from the urban cycle? Will it coexist with this urban monument orwill it be eliminated?

The difference in the ability of plants to obtain resources has been used to predict the competition outcomes. Competitive interactions between plants can be influenced by trophic interactions. If mycorrhizae increase the growth of inferior competitors, then it can prevent competitive exclusion. I examined the effect of mycorrhizae on competitive interactions and found that inferior competitors had slow growth in the absence of mycorrhizae, but greater growth with mycorrhizae. By providing greater growth responses to inferior versus superior competitors, mycorrhizae promoted coexistence. In a separate experiment, I looked at the effects of whole soil biota on competitive ability. Coexistence can occur if dominant competitors experience negative feedback and or if inferior competitors experience positive feedback. I examined Plantago lanceolata L. specific feedback effects on competitive ability of 21 co-occurring species. I found that feedback effects did not affect hierarchies, and that positive feedback did not improve species competitive ability. / NSERC (Natural Science and Engineering Research Council), University of Guelph, Queen Elizabeth II Graduate Scholarship for Science and Technology

Environmental Education is becoming increasingly important as human populations expand into wildlife habitat, often resulting in human/wildlife conflicts. Meadow Creek British Columbia has experienced a long history of conflicts with grizzly bears resulting in significant bear mortalities. This qualitative research investigates human attitudes and behaviours relating to human/grizzly bear coexistence in this area. Twenty eight participants with diverse values contributed to in-depth interviews and a focus group that revealed perceived barriers and potential solutions to human/grizzly bear coexistence. Results show increased attitudes of tolerance since mid-2000s and that on-going support is needed to enable bears and humans to coexist. This research suggests coexisting with grizzly bears in Meadow Creek may serve to improve the linkage function of this area, making coexistence important to local grizzly populations. This work may be a useful study for communities in areas of high human/bear conflicts or in linkage areas between threatened populations of wildlife.

Mire pools – shallow water-bodies in peat-forming wetlands – are a characteristic feature of New Zealand’s subalpine and alpine landscapes (>1000 m a.s.l.), yet have been the subject of few biological studies to date, particularly of their algal communities. This research focuses on these subalpine systems, and on their diatom communities. Despite the established paradigm of ubiquitous dispersal in micro-organisms, recent taxonomic studies have confirmed a distinctive endemic component in the freshwater diatom flora of the New Zealand / Tasmania / East Australian region. In this study, I examined benthic diatom communities from >320 freshwater sites throughout New Zealand and showed that over 20% of species may be confined to this region. The endemic diatom species had highest densities in stable, unproductive environments, particularly in high-altitude mire pools and tarns. In most cases, non-endemic taxa coexisted with endemic species. This raised questions about (1) the special characteristics of mire pools and tarns (since endemism might be expected in areas that have unique environmental characteristics), and (2) the mechanisms that have allowed existing endemic taxa to withstand displacement by common cosmopolitan taxa, which, by definition, are successful colonisers. I addressed these questions using two years of data from four subalpine mire pools (Bealey Spur wetland, near Arthur’s Pass, South Island). Physico-chemical data showed that water chemistry of these pools may differ from that of many Northern Hemisphere mire systems with respect to the relationship between pH and dissolved ions (especially calcium). This may be due to a combination of high pH rainfall, high rainfall quantities that limit the acidification effects of humic substances, and possibly vegetation differences. Therefore, some endemic taxa may be confined to these habitats because of the characteristic properties of the pools. I investigated the effects of disturbances in these stable environments. In the largest pool endemic species were shown to decline as wind-induced substrate disturbance increased. Endemic species also declined in two pools following small-scale experimental substrate disturbances. In all cases, non-endemic species remained unchanged. The distinctive species Eunophora cf. oberonica was responsible for much of the observed decline in endemic species abundances, which was evidently due to destruction of their specialised habitat within the cyanobacterial mats that made up the pool substrates. I explained pool-specific responses of diatom communities to disturbances by drawing on recent theory of invasibility as an intrinsic environmental property. I further investigated species coexistence by examining several general patterns of interspecific coexistence described for macroscopic organisms (e.g., abundance – occupancy, abundance – persistence). Patterns in mire-pool diatom communities were generally similar to those in larger organisms, and did not differ with respect to geographical range size (endemics vs. non-endemics), except at the scale of single pools. At this scale, endemic taxa, in particular E. cf. oberonica, can persist as dominant species. All the community analyses were underpinned by detailed taxonomic studies, from which I assessed over 40% of the more common species in the pools to be either endemic or likely to be endemic. Two species occurring in the study area are formally described as new species. Overall, this work highlights the vulnerability of this hidden component of New Zealand’s biodiversity to disturbances and environmental changes.

While neutrino oscillations indicate that neutrino flavors mix and that neutrinos have mass, they do not supply information on the absolute mass scale of the three flavors of neutrinos. Currently, the only viable way to determine this mass scale is through the observation of the theoretically predicted process of neutrinoless double-beta decay (0νββ). This yet-to-be-observed decay process is speculated to occur in a handful of nuclei and has predicted half-lives greater than 10²⁵ years. Observation of 0νββ is the goal of several large-scale, multinational efforts and consists of detecting a sharp peak in the summed β energies at the Q-value of the reaction. An exceptional candidate for the observation of 0νββ is ⁷⁶Ge, which offers an excellent combination of capabilities and sensitivities, and two such collaborations, MAJORANA and GERDA, propose tonne-scale experiments that have already begun initial phases using a fraction of the material. The absolute scale of the neutrino masses hinges on a matrix element, which depends on the ground-state wave functions for both the parent (⁷⁶Ge) and daughter (⁷⁶Se) nuclei in the 0νββ decay and can only be calculated from nuclear structure models. Efforts to provide information on the applicability of these models have been undertaken at the University of Kentucky Accelerator Laboratory using gamma-ray spectroscopy following inelastic scattering reactions with monoenergetic, accelerator-produced fast neutrons. Information on new energy levels and transitions, spin and parity assignments, lifetimes, multipole mixing ratios, and transition probabilities have been determined for ⁷⁶Se, the daughter of ⁷⁶Ge 0νββ, up to 3.0 MeV. Additionally, inaccuracies in the accepted level schemes have been addressed. Observation of 0νββ requires precise knowledge of potential contributors to background within the region of interest, i.e., approximately 2039 keV for ⁷⁶Ge. In addition to backgrounds resulting from surrounding materials in the experimental setup, ⁷⁶Ge has a previously observed 3952-keV level with a de-exciting 2040-keV γ ray. This γ ray constitutes a potential background for 0νββ searches, if this level is excited. The cross sections for this level and, subsequently, for the 2040-keV γ ray has been determined in the range from 4 to 5 MeV.

This thesis investigates the ecological and evolutionary implications of a recent secondary contact between two closely related bird species: collared (Ficedula albicollis) and pied (F. hypoleuca) flycatchers. Collared flycatchers started to colonize the Swedish island of Öland, where pied flycatchers were already present, in the late 1950s-early1960s. My major aims were to investigate which factors are acting against versus for long-term coexistence between the two species. Specifically, I investigated the relative importance of allopatric divergence, interspecific competition, hybridization and learning in promoting or inhibiting coexistence. The combined effects of interspecific competition and hybridization drives pied flycatchers towards local extinction in their preferred deciduous habitat. However, my results also show that pied flycatchers are better able to tolerate harsh environmental conditions. This trade-off between competitive ability and resilience in the face of harsh conditions facilitates a regional coexistence between the species. Coexistence is furthermore favoured by competition-mediated divergence in breeding habitat choice, timing of breeding and male breeding plumage colouration. Due to interspecific competition, male pied flycatchers are forced to breed in a more mixed forest type with a later peak in food abundance, which is accompanied by a divergence in breeding time between the two species. In areas shared with collared flycatchers, male pied flycatchers with brown plumage coloration, most divergent from that of collared flycatchers, are favoured by selection. In addition to facilitating coexistence, the observed shift in habitat occupancy increases reproductive isolation between the two species. By using cross-fostering experiments I demonstrate that natal habitat imprinting has the potential to additionally speed up habitat segregation. Finally I show that hybrid nestlings express an intermediate response to harsh environments, indicating that another aspect of ecological-based selection may be important in reproductive isolation between the species. In summary, my results show that adaptations during historic allopatry are important both in facilitating coexistence as well as in providing a foundation for further ecological divergence at secondary contact. This is of relevance today as many species are shifting their distributions in response to habitat disturbance and global warming.

Mire pools – shallow water-bodies in peat-forming wetlands – are a characteristic feature of New Zealand’s subalpine and alpine landscapes (>1000 m a.s.l.), yet have been the subject of few biological studies to date, particularly of their algal communities. This research focuses on these subalpine systems, and on their diatom communities. Despite the established paradigm of ubiquitous dispersal in micro-organisms, recent taxonomic studies have confirmed a distinctive endemic component in the freshwater diatom flora of the New Zealand / Tasmania / East Australian region. In this study, I examined benthic diatom communities from >320 freshwater sites throughout New Zealand and showed that over 20% of species may be confined to this region. The endemic diatom species had highest densities in stable, unproductive environments, particularly in high-altitude mire pools and tarns. In most cases, non-endemic taxa coexisted with endemic species. This raised questions about (1) the special characteristics of mire pools and tarns (since endemism might be expected in areas that have unique environmental characteristics), and (2) the mechanisms that have allowed existing endemic taxa to withstand displacement by common cosmopolitan taxa, which, by definition, are successful colonisers. I addressed these questions using two years of data from four subalpine mire pools (Bealey Spur wetland, near Arthur’s Pass, South Island). Physico-chemical data showed that water chemistry of these pools may differ from that of many Northern Hemisphere mire systems with respect to the relationship between pH and dissolved ions (especially calcium). This may be due to a combination of high pH rainfall, high rainfall quantities that limit the acidification effects of humic substances, and possibly vegetation differences. Therefore, some endemic taxa may be confined to these habitats because of the characteristic properties of the pools. I investigated the effects of disturbances in these stable environments. In the largest pool endemic species were shown to decline as wind-induced substrate disturbance increased. Endemic species also declined in two pools following small-scale experimental substrate disturbances. In all cases, non-endemic species remained unchanged. The distinctive species Eunophora cf. oberonica was responsible for much of the observed decline in endemic species abundances, which was evidently due to destruction of their specialised habitat within the cyanobacterial mats that made up the pool substrates. I explained pool-specific responses of diatom communities to disturbances by drawing on recent theory of invasibility as an intrinsic environmental property. I further investigated species coexistence by examining several general patterns of interspecific coexistence described for macroscopic organisms (e.g., abundance – occupancy, abundance – persistence). Patterns in mire-pool diatom communities were generally similar to those in larger organisms, and did not differ with respect to geographical range size (endemics vs. non-endemics), except at the scale of single pools. At this scale, endemic taxa, in particular E. cf. oberonica, can persist as dominant species. All the community analyses were underpinned by detailed taxonomic studies, from which I assessed over 40% of the more common species in the pools to be either endemic or likely to be endemic. Two species occurring in the study area are formally described as new species. Overall, this work highlights the vulnerability of this hidden component of New Zealand’s biodiversity to disturbances and environmental changes.

Fear of predation can have a major impact on the behaviour of prey species. Despite recent codifying of the concept of the ecology of fear, there has been relatively little focus on how these ideas apply to large carnivore species which, although not prey sensu stricto, may experience fear as a result of threats from humans. This thesis argues that large mammalian carnivores are subject to a Landscape of Fear similar to that described for prey species, and will respond behaviourally to fear of human-caused mortality. The idea of a "Landscape of Coexistence" is introduced to denote the perceived risk from humans and associated behavioural responses that can be overlain on spatio-temporally heterogeneous landscapes. Literature on the ecology of fear for large mammalian carnivores and, as there is a dearth of such literature, the current theory on the ecology of fear for other guilds is reviewed, and how this might inform large carnivore behaviour in a Landscape of Coexistence is explored. Behavioural effects of human-caused mortality risk are revealed for lions living in a human dominated landscape (Laikipia County, Kenya), specifically how lions adjust their movement patterns, habitat use and foraging tactics when in proximity to humans. It is argued that these behavioural adjustments represent a trade-off between maximising fitness enhancing activities and minimising the risk of human-caused mortality, thus need to be taken into consideration along with the lethal effects of humans when explaining the density, distribution and behaviour of lions throughout much of their remaining range. Although fear is generic, 'human-caused mortality risk' represents a distinct and very important sub-set of the ecology of fear for the carnivore guild. The existence of a Landscape of Coexistence has implications for understanding their foraging ecology, and ultimately their population dynamics and role in the ecosystem, and is therefore, important for the conservation of large carnivores throughout large parts of their remaining ranges.