Ceramide-1-phosphate (C1P) has proven to be a bioactive sphingolipid with diverse functions within the cell. At this time, ceramide kinase (CERK) is the only known enzyme known to generate C1P in mammalian cells, and this bioactive lipid is responsible for the activation and translocation of cytosolic phospholipase A2, the initial rate limiting step in eicosanoid synthesis. These studies investigate the regulation of ceramide kinase by calcium. While CERK activity has been shown to be calcium sensitive, little is known about how CERK is activated within the cell; one possibility is the interaction with calcium "sensor" proteins such as calmodulin. In this study, we develop two protocols to efficiently examine the interaction of CERK with calcium dependent proteins: V5 co-immunoprecipitation and Ni-NTA affinity purification. The methods utilize either adenoviral infection or Effectene© transfection of cells to ectopically express CERK with both a 6x His and V5 tag on its C terminus. Unlike the report of Igarashi and co-workers, our findings reveal that CERK does not specifically interact with the calcium sensor, calmodulin, in three different cell types. We also show that the calcium dependent membrane organizer, annexin A2, also does not bind to CERK. In light of these findings, we illustrate that while CERK may be sensitive to calcium, it does not, as previously reported by another laboratory, specifically bind to calmodulin. These studies eliminate possible calcium mediator proteins and are suggestive of another method for the calcium sensitive regulation of CERK lending to new avenues of investigation (i.e. CaMKII). This report also firmly established two successful protocols for investigating protein partners of CERK. Ultimately, through providing a clearer picture behind the calcium regulation of CERK, we can elucidate possible novel therapeutic targets within the inflammatory pathway.

Ceramides are bioactive lipids that can promote splicing of apoptosis-related genes, including caspase 9 and BCL-x. A recent study demonstrated that expression of neutral sphingomyelinase (NSMase), an enzyme that hydrolyzes sphingomyelins to generate ceramide, is regulated by Group VIA phospholipase A2 (iPLA2β)-dependent mechanism during β-cell apoptosis. This prompted us to hypothesize that iPLA2 is upstream of ceramide generation in the process regulating splicing of apoptotic genes. To test this, Jurkat T cells were treated with the selective inhibitor of iPLA2β, bromoenol lactone (BEL), RNA was isolated and converted to cDNA, and caspase 9 and BCL-x mRNA viii species were amplified using RT-PCR. Inhibition of iPLA2β activity with BEL caused a significant shift in splicing favoring variants encoding the anti-apoptotic forms of caspase 9 (caspase 9b) and BCL-x (BCL-x(L)). This shift was consistent with previously reported effects of ceramide and suggested that iPLA2β regulates splicing of these pre-mRNAs. We next determined whether iPLA2β regulates splicing events during a biological response. Caspase-9 and BCL-x splice variants were compared in human and mouse islets, mouse islet cell lines, and in rat insulinoma (INS1) cells. INS-1 insulinoma cells were treated with thapsigargin to induce ER stress, which can eventually lead to apoptosis. Thapsigarin-treated INS-1 cells exhibited an increase in the ratio of BCL-x(s) (pro-apoptotic) to BCL-x(L) (anti-apoptotic) but BEL prevented this shift in splicing. Splicing data obtained from genetically modified rodent mice (iPLA2β knockouts and transgenics) also demonstrated the involvement of iPLA2β in alternative splicing. Together, these observations indicate that iPLA2β plays an important role in the regulation of pre-mRNA splicing of key apoptotic factors. Our findings therefore suggest a novel role for iPLA2β in determining whether cells survive or undergo apoptosis.

While cigarette smoking is a common-knowledge way to stay lean, it has long been known as a risk factor for diabetes and obesity. Here we establish that smoking causes fat gain and metabolic disruption in mice, effects which are exacerbated by a high-fat, high-sugar diet. We found that smoke exposure increases levels of ceramide—the lipid responsible for diet-induced insulin resistance—and that blocking ceramide production with the pharmacological inhibitor myriocin restored insulin sensitivity, stopped weight gain, and rescued mitochondrial respiration in vivo and in vitro.We also sought to assess the impact of the RAGE ligand HMGB1 on skeletal muscle metabolism. We found that respiration between vehicle and HMGB1-injected red gastrocnemius was comparable. In myotubes, adding myriocin treatment to the HMGB1 cells increased respiration above HMGB1 treatment alone. HMGB1 increased oxidative stress in cultured myotubes and increased the transcript levels of Spt2, the enzyme responsible for the rate-limiting step in ceramide synthesis, although transcript levels of markers of mitochondrial fission and fusion leave us unsure of HMGB1's impact on mitochondrial dynamics. HMGB1, even at an exceptionally low dose over only 2 weeks, did cause significant impairment in glucose and insulin tolerance tests. Considering HMGB1's accessibility as a therapeutic target, its involvement in metabolic disruption is worth pursuing further.

Prevalence of diabetes, especially type 2 diabetes mellitus (T2DM) is increasing worldwide. Millions of people are already affected by T2DM and estimates predict over half a billion people will likely be suffering from the disease by 2030. T2DM is associated with an increased risk of developing cardiovascular disease. Cardiovascular dysfunction is the leading cause of mortality among type 2 diabetics. Treatment for T2DM has changed over time. Though it was once known as insulin independent, a large portion of type 2 diabetics are now treated with insulin injections. However, type 2 diabetics treated with insulin are more likely to suffer from heart complications. Due to this, we sought to determine the specific effect of insulin and insulin-induced ceramide accrual on heart mitochondrial bioenergetics. To do so we used both in vitro and in vivo models. H9c2 cardiomyocytes and adult male mice were treated with insulin with or without the ceramide biosynthesis inhibitor myriocin. Mitochondrial bioenergetics were determined in permeabilized cardiomyocytes and myocardium. In this study we demonstrate that insulin induced ceramide accrual in both isolated cardiomyocytes and whole murine myocardium. We further found that insulin treatment is sufficient to disrupt mitochondrial respiration in both models. Inhibition of the ceramide accrual rescued mitochondrial respiration, indicating that ceramide is necessary for the insulin-induced alterations in heart mitochondrial respiration. These results suggest that insulin has a role in the development of heart complications associated with T2DM due to cardiomyocyte mitochondrial disruption. They also implicate ceramide as a possible mediator in the development of insulin-related heart disorders.

The prevalence of both Type 2 diabetes mellitus (T2DM) and Alzheimer's disease (AD) is increasing worldwide, and the trends are unfortunately expected to continue. AD has recently been tied with mitochondrial dysfunction and insulin resistance, creating a mechanistic tie between AD and T2DM. Unfortunately, insulin resistance is often increased with aging and therefore, all individuals are at risk of brain mitochondrial dysfunction. Without proper mitochondrial function, the brain will degenerate, causing impaired cognitive function and reduced quality of life. The purpose of this study is two-fold: first, to understand the role of ceramides in insulin-induced brain mitochondrial dysfunction, and; second, to understand how ketones can restore brain mitochondrial function in aged brains. To evaluate the role of insulin resistance and ceramides in brain mitochondrial function, we induced hyperinsulinemia in ApoE4 mice. In addition to insulin, one group received myriocin injections to inhibit ceramide biosynthesis. We observed significant increases in brain ceramides in the insulin-treated group, which correlated with disrupted brain mitochondrial function. However, the group receiving myriocin alone, and, importantly, myriocin with insulin, had normal lipid profiles and normal mitochondrial bioenergetics. Altogether, these findings support the hypothesis of the key role of ceramides in insulin resistance-induced mitochondrial dysfunction within the brain. Next, young adult (5 months old) and old (28 months old) rats were assigned to either standard chow diets or very-low-carbohydrate, high-fat, ketogenic diets for 4 weeks. Following the treatment period, we analyzed brain mitochondrial function and oxidative stress. We found that the old rats fed the ketogenic diet had improved mitochondrial function in comparison to the old rats consuming standard rodent chow. In addition, the old rats fed a standard diet had significantly higher levels of oxidative stress than the aged rats on the very-low-carbohydrate, high-fat diet. These findings revealed that ketones can protect brain mitochondrial function in aging. Collectively, these results suggest that insulin resistance has a role in the development of brain mitochondrial dysfunction due to ceramide accumulation, while ketones can help mitigate some of the negative consequences of aging, perhaps some due to insulin resistance, on brain mitochondrial function.

Methoden der Fluoreszenz-Lokalisationsmikroskopie (engl. single-molecule localization microscopy, SMLM) ermöglichen es Moleküle zu quantifizieren und deren Verteilung zu analysieren. Im Rahmen dieser Arbeit wurden verschiedene Membranmoleküle auf unterschiedlichen eukaryotischen Zellen, aber auch auf Prokaryoten mit dSTORM (engl. direct stochastic optical reconstruction microscopy) oder PALM (engl.: photoactivated localization microscopy) aufgenommen und quantifiziert. Bevor jedoch diese hochauflösende fluoreszenzbasierte Technik für biologische Fragestellungen angewendet werden konnten, mussten zunächst potentielle Artefakt-auslösende Quellen identifiziert und Strategien gefunden werden, um diese zu eliminieren. Eine mögliche Artefakt-Quelle ist eine zu niedrige Photonenzahl, die von Fluorophoren emittiert wird. Werden zu wenige Photonen detektiert, kann die Lokalisation eines Fluorophors weniger präzise bestimmt werden. Dies kann zu einer falschen Abbildung von Strukturen führen oder zu falschen Rückschlüssen über die Verteilung von Molekülen. Eine Möglichkeit die Anzahl der emittierten Photonen zu erhöhen, ist chemische Additive als Triplettlöscher einzusetzen. Sie bewirken, dass die Fluorophore wieder in den Grundzustand relaxieren und somit wieder angeregt werden können. Es wurden verschiedene Additive, die in der Literatur als Triplettlöscher beschrieben sind, getestet. Dazu wurden zunächst ihre Auswirkungen auf den Triplettzustand verschiedener Fluorophore (Alexa Fluor (Al) 488, 532 und 647 und Atto655) mit Hilfe von Fluoreszenzkorrelationsspektroskopie (FCS) untersucht. Cyclooctatetraen (COT) bewirkte dabei eine Abnahme der Triplettausbeute von Al488, Al532 und Al647 um ~ 40-60%, bei Atto655 veränderte sie sich nicht. Obwohl die Ergebnisse der FCS-Messungen darauf hindeuten, dass COT in einer erhöhten Anzahl an emittierten Photonen resultiert, konnte dies bei dSTORM-Messungen nicht bestätigt werden. Hier hatte COT nur einen größeren positiven Effekt auf das Fluorophor Al647 (Zunahme um ~ 60%). Eine Erklärung für diese Widersprüchlichkeit zu den Ergebnissen aus den FCS-Messungen, könnte das Vorhandensein des Schaltpuffers bei dSTORM-Messungen sein. Dieser bewirkt den Übergang der Fluorophore in den Aus-Zustand bzw. entzieht dem Puffer Sauerstoff. Bei der Zugabe von 5 mM Kaliumiodid (KI) nahm die Triplettamplitude bei FCS-Messungen nur bei Al488 ab (um ~ 80%). Eine geringe Steigerung (um ~ 10%) der Intensität von Al488 mit KI konnte bei dSTORM-Messungen mit niedrigen Konzentrationen (~ 0,5 mM) erzielt werden. Bei einer Konzentration von 5 mM sank die Intensität jedoch wieder um 40%. Deuteriumoxid (D2O) soll, anders als die Triplettlöscher, eine Verbesserung der Photonenausbeute dadurch bewirken, dass strahlungslose Relaxationsprozesse minimiert werden. Mit dSTORM-Messungen konnte gezeigt werden, dass Atto655 und Al647 in D2O zwar pro An-Zustand mehr Photonen emittieren als in Schaltpuffer ohne D2O, da die Fluorophore hier jedoch schneller bleichen, letztendlich die gleiche Anzahl an Photonen detektiert werden. Um die Anzahl an emittierten Photonen zu erhöhen, eignet sich also nur COT bei dSTORM-Messungen mit AL647 und KI in sehr geringen Konzentrationen bei Al488. D2O kann eingesetzt werden, wenn eine Probe schnell vermessen werden muss, wie zum Beispiel bei Lebendzellmessungen. Nicht nur eine zu niedrige Photonenzahl, auch eine zu geringe Photoschaltrate kann Artefakte bei dSTORM-Messungen erzeugen. Dies wurde anhand von verschiedenen biologischen Strukturen, die mit unterschiedlichen Anregungsintensitäten aufgenommen wurden, deutlich gemacht. Besonders die Aufnahmen von Plasmamembranen sind anfällig für die Generierung von Artefakten. Sie weisen viele inhomogene und lokal dichte Regionen auf. Wenn nun mehr als ein Emitter pro µm² gleichzeitig an ist, erzeugt das Auswertungsprogramm große artifizielle Cluster. Die hier durchgeführten Messungen machen deutlich, wie wichtig es ist, dSTORM-Bilder immer auf mögliche Artefakte hin zu untersuchen, besonders wenn Moleküle quantifiziert werden sollen. Dafür müssen die unbearbeiteten Rohdaten sorgfältig gesichtet werden und notfalls die Messungen mit einer höheren Laserleistung wiederholt werden. Da dSTORM mittlerweile immer mehr zur Quantifizierung eingesetzt wird und Clusteranalysen durchgeführt werden, wäre es sinnvoll bei Veröffentlichungen die Rohdaten von entscheidenden Aufnahmen der Öffentlichkeit zur Verfügung zu stellen. Die Färbemethode ist ein weiterer Punkt, durch den Artefakte bei der Abbildung von Molekülen mittels SMLM entstehen können. Häufig werden Antikörper zum Markieren verwendet. Dabei sollte darauf geachtet werden, dass möglichst kleine Antikörper oder Antikörperfragmente verwendet werden, besonders wenn Clusteranalysen durchgeführt werden sollen. Anderenfalls leidet die Auflösung darunter, bzw. erhöht sich die Gefahr der Kreuzvernetzung von Molekülen. Im zweiten Teil der vorliegenden Arbeit, wurden Plasmamembran-Ceramide untersucht. Ceramide gehören zu den Sphingolipiden und regulieren diverse zelluläre Prozesse. Verschiedene Stimuli bewirken eine Aktivierung von Sphingomyelinasen (SMasen), die Ceramide in der Plasmamembran synthetisieren. Steigt die Konzentration von Ceramiden in der Plasmamembran an, kondensieren diese zu Ceramid-reichen Plattformen (CRPs). Bisher ist noch wenig über die Verteilung der Ceramide und die Größe der CRPs bekannt. Sie wurden hier über IgG-Antikörper in der Plasmamembran von Jurkat-, U2OS-, HBME- und primären T-Zellen angefärbt und erstmals mit dSTORM hochaufgelöst, um sie dann zu quantifizieren. Unabhängig von der Zelllinie befanden sich 50% aller Ceramidmoleküle in ~ 75 nm großen CRPs. Im Mittel bestanden die CRPs aus ~ 20 Ceramiden. Mit Hilfe einer Titrationsreihe konnte ausgeschlossen werden, dass diese Cluster nur durch die Antikörper-Färbung artifiziell erzeugt wurden. Bei Inkubation der Zellen mit Bacillus cereus Sphingomyelinase (bSMase) stieg die Gesamtkonzentration der Ceramide in der Plasmamembran an, ebenso wie die Ceramidanzahl innerhalb der CRPs, außerdem die Anzahl und Größe der CRPs. Dies könnte zu einer Veränderung der Löslichkeit von Membrankomponenten führen, was wiederum eine Akkumulation bestimmter Rezeptoren oder eine Kompartimentierung bestimmter Proteine erleichtern könnte. Die Anhäufung der Ceramide in den CRPs könnte ebenfalls die lokale Interaktion mit anderen Membranmolekülen erleichtern und dadurch möglicherweise die Reaktivität von Rezeptoren verändern. Mittels Azid-modifizierten Ceramidanaloga und kupferfreier Click-Chemie wurden Plasmamembran-Ceramide auch in lebenden Jurkat-Zellen mit Hilfe konfokaler Laser-Raster-Mikroskopie (CLSM, engl. confocal laser scanning microscopy) und Strukturierter Beleuchtungsmikroskopie (SIM, engl. structured illumination microscopy) untersucht. Dabei konnte gezeigt werden, dass die Fettsäure-Kettenlänge und die Position des Azids bei den Ceramidanaloga eine entscheidende Rolle spielt, wie hoch das detektierte Signal in der Plasmamembran letztendlich ist. Die Versuche machen auch deutlich, dass die klickbaren Ceramidanaloga lebendzellkompatibel sind, sodass sie eine hervorragende Möglichkeit darstellen, zelluläre Reaktionen zu verfolgen. Es wurden hier nicht nur Ceramide in eukaryotischen Zellen analysiert, sondern auch in Bakterien. Neisseria meningitidis (N. meningitidis) sind gramnegative Bakterien, die im Menschen eine Sepsis oder eine Meningitis auslösen können. Es wurde mittels immunhistochemischen Färbungen mit dem anti-Ceramid IgG-Antikörper, aber auch mit den klickbaren Ceramidanaloga, ein Signal in der Membran erhalten, was mit dSTORM hochaufgelöst wurde. In anderen Bakterien wurden ebenfalls schon Sphingolipide nachgewiesen. Studien zu Ceramiden in N. meningitidis wurden bisher jedoch noch nicht veröffentlicht. Im Rahmen dieser Arbeit konnten erstmals Ergebnisse erhalten werden, die darauf hinweisen, dass N. meningitidis ebenfalls Ceramide besitzen könnten. In einem dritten Projekt wurde die Interaktion zwischen NK-Zellen und Aspergillus fumigatus untersucht. Der Schimmelpilz kann eine Invasive Aspergillose in immunsupprimierten Menschen auslösen, was zum Tod führen kann. Verschiedene Studien konnten schon zeigen, dass NK-Zellen eine wichtige Rolle bei der Bekämpfung des Pilzes spielen. Der genaue Mechanismus ist jedoch noch unbekannt. Im Rahmen dieser Arbeit konnte nachgewiesen werden, dass der NK-Zell-Marker CD56 entscheidend für die Pilzerkennung ist. Mit immunhistochemischen Färbungen und LSM-, aber auch dSTORM-Messungen, konnte gezeigt werden, dass die normalerweise homogen verteilten CD56-Rezeptoren auf der Plasmamembran von NK-Zellen aktiv an die Interaktionsstelle zu A. fumigatus transportiert werden. Mit der Zeit akkumulieren hier immer mehr CD56-Proteine, während das Signal in der restlichen Membran immer weiter abnimmt. Es konnte erstmals CD56 als wichtiger Erkennungsrezeptor für A. fumigatus identifiziert werden. In dem letzten bearbeiteten Projekt, wurde die Bindung von Anti-N-Methyl-D-Aspartat (NMDA)-Rezeptor Enzephalitis Autoantikörper an Neuronen untersucht. Bei einer Anti-NMDA-Rezeptor Enzephalitis bilden die Patienten Autoantikörper gegen die NR1-Untereinheit ihrer eigenen postsynaptischen NMDA-Rezeptoren. Da die Krankheit oft sehr spät erkannt wird und die Behandlungsmöglichkeiten noch sehr eingeschränkt sind, führt sie noch oft zum Tod. Sie wurde erst vor wenigen Jahren beschrieben, sodass der genaue Mechanismus noch unbekannt ist. Im Rahmen dieser Arbeit, konnten erste Färbungen mit aufgereinigten Antikörper aus Anti-NMDA-Rezeptor Enzephalitis Patienten an NMDA-Rezeptor-transfizierte HEK-Zellen und hippocampalen Maus-Neuronen durchgeführt und mit dSTORM hochaufgelöst werden. Mit den Messungen der HEK-Zellen konnte bestätigt werden, dass die Autoantikörper an die NR1-Untereinheit der Rezeptoren binden. Es konnten erstmals auch die Bindung der Antikörper an Neuronen hochaufgelöst werden. Dabei wurde sichtbar, dass die Antikörper zum einen dicht gepackt in den Synapsen vorliegen, aber auch dünner verteilt in den extrasynaptischen Regionen. Basierend auf der Ripley’s H-Funktion konnten in den Synapsen große Cluster von ~ 90 nm Durchmesser und im Mittel ~ 500 Lokalisationen und extrasynaptisch kleinere Cluster mit einem durchschnittlichen Durchmesser von ~ 70 nm und ~ 100 Lokalisationen ausgemacht werden. Diese ersten Ergebnisse legen den Grundstein für weitere Messungen, mit denen der Mechanismus der Krankheit untersucht werden kann. / With single molecule localization microscopy (SMLM) quantification of molecules and the analysis of their distribution becomes possible. In this work various plasma membrane molecules of different eukaryotic and prokaryotic cells were imaged with dSTORM (direct stochastic optical reconstruction microscopy) or PALM (photoactivated localization microscopy) and quantified. To use these super-resolution fluorescence microscopy techniques and answer elaborate biological questions, potential sources of artifacts were identified and strategies to circumvent them developed. A possible source of artifacts is an insufficient number of photons emitted by fluorophores. If less photons are detected, determining the localization of one fluorophore is less precise. This can cause a wrong reconstruction of structures or might lead to false conclusions about the distribution of molecules. One possibility to increase the number of photons is to use chemical additives which quench the triplet state of fluorophores. They ensure that the fluorophores relax into the ground state allowing them to become excited again. Different additives, described in literature as triplet quenchers, were tested. The effects of these additives on the triplet state of different fluorophores (Alexa Fluor (Al) 488, 532 und 647 und Atto655) were analyzed with fluorescence correlation spectroscopy (FCS). Cyclooctatetraene (COT) resulted in a decrease of triplet state yield of Al488, Al532 and Al647 by ~ 40-60%, yet the triplet state of Atto655 was unaffected. FCS measurements indicated that COT results in an increased number of emitted photons, but dSTORM measurements could not confirm this finding. Here, COT only revealed a positive effect on the intensity of Al647 (increase by ~ 60%). An explanation for this inconsistency with the FCS results might be the presence of the switching buffer in dSTORM measurements. The buffer is designed to cause a transition of the fluorophores to and stabilize the off-state by removing oxygen from the sample, counteracting the effect of COT. On addition of 5 mM potassium iodide (KI) only Al488 fluorophores showed a decreased triplet state rate (~ 80%) in FCS measurements. This finding was confirmed by dSTORM measurements with low concentrations (~ 0.5 mM) of KI which resulted in a slight intensity increase (~ 10%) of Al488. Higher KI concentration (5 mM) on the other hand showed a reversed effect, resulting in a drop in intensity by ~ 40%. Deuterium oxide (D2O) isn’t a triplet quencher but should minimize non-radiative processes. DSTORM measurements with Atto665 and Al647 revealed, that D2O does not affect the total number of emitted photons per fluorophore. Instead, D2O increased the amount of emitted photons per time. In a nutshell, these results show that dSTORM measurements with Al647 can be improved using COT, and measurements with Al488 by using very low concentrations of KI. If needed, D2O can speed up dSTORM acquisition time considerably, e.g. for life cell measurements. In addition to an insufficient number of collected photons, inappropriate photoswitching rates can induce artifacts in dSTORM measurements as well. This was shown using various biological reference structures. Especially the imaging of plasma membranes is prone to generate artifacts. Plasma membranes exhibit a lot of intrinsically three-dimensional structures with high local emitter densities. In these regions of higher fluorophore densities the likelihood of two close fluorophores emitting at the same time is increased. This in turn can result in large artificial clusters due to misinterpretation by the reconstruction software. Taken together, the performed experiments show how important it is to prove dSTORM images and minimize possibility image artifacts. Thus, raw data movies need to be examined carefully and, if necessary, measurements must be repeated with adapted imaging conditions. Since dSTORM is increasingly used for quantification and cluster analysis it is recommended to publish raw data in the Supporting information of the manuscript. Another source of artifacts when imaging molecules with SMLM is the staining procedure. Usually antibodies are used to label biological structures for dSTORM. In the interest of resolution, small antibodies or just fragments of antibodies should be used, especially if cluster analysis is performed. Otherwise reduced resolution or an increase in cross-linking of molecules might occur. In the second part of this study plasma membrane ceramides were investigated. Sphingolipid ceramides regulate various cellular processes. Different stimuli initiate activation of sphingomyelinases (SMase) which synthesize ceramides at the plasma membrane. A rise in ceramide concentration leads to a condensation of them in ceramide-rich platforms (CRPs). So far, only little is known about the distribution and the size of CRPs. Here, plasma membrane ceramides of Jurkat-, U2OS-, HBME- and primary T-cells were stained with an IgG-antibody, imaged using dSTORM and their distribution quantitatively analyzed. Independent of the analyzed cell line, ~ 50% of all ceramides detected in the plasma membrane formed CRPs with a size of ~ 75 nm. On average one CRP consisted of ~ 20 ceramide molecules. Using a titration series the possibility of artificial cluster generation due to antibody staining was ruled out. Treatment of cells with Bacillus cereus sphingomyelinase (bSMase) increased the overall ceramide concentration in the plasma membrane, the number of ceramides in the CRPs as well as the quantity and the size of CRPs. This might result in a higher solubility of membrane components in CRPs which in turn could facilitate accumulation or compartmentation of certain proteins. Accumulation of ceramides in the CRPs could also enable local interaction with other molecules and possibly change the reactivity of some receptors. To investigate plasma membrane ceramides in living cells azido-modified ceramides and copper-free click chemistry were used for labeling. Imaging was performed using confocal laser-scanning microscopy (LSM) and structured illumination microscopy. It was shown that the length of fatty acid chains and the position of the azido group of ceramide analogues play a decisive role in the magnitude of the detected signal in the plasma membrane. These results demonstrate that azido-functionalized ceramides are live-cell compatible, making them an excellent tool to follow cellular reactions. In this study, ceramides were not only analyzed in eukaryotic cells but in bacteria as well. Neisseria meningitidis (N. meningitidis) are gram-negative bacteria triggering sepsis or meningitis in humans. Using both immunolabeling with anti-ceramide IgG-antibodies and azido-modified ceramides, ceramides were detected for the first time in the membrane of N. meningitidis by dSTORM. Although sphingolipids were reported to exist in various bacterial membranes, studies about ceramides in N. meningitidis have not yet been published. The results obtained here suggest the presence of ceramides in N. meningitidis. The third part of this thesis addresses the interaction between NK cells and Aspergillus fumigatus. The mold can cause invasive aspergillosis in immunocompromised patients which can lead to death. Various studies have already shown that NK cells play a crucial role in the clearance of the fungal infection. Still, the exact mechanism remains unknown. As part of this work the NK cell marker CD56 was identified as a decisive receptor in recognition of the mold. Using LSM and dSTORM measurements in combination with immunocytochemical staining an active transport of the usually homogenous distributed CD56 receptors to the interaction site of NK cells and fungus was detected. Over time CD56 proteins accumulate at these interaction sites while the signal in the rest of the membrane continuously decreases. For the first time this study was able to identify CD56 as an important recognition receptor for A. fumigatus. In the last project binding of anti-N-Methyl-D-aspartate (NMDA) receptor encephalitis autoantibodies were investigated in neurons. Patients with this form of encephalitis generate autoantibodies against the NR1 subunit of their own postsynaptic NMDA receptors. Since NMDA receptor encephalitis is often diagnosed too late and treatment options are limited the disease often proves to be fatal. Anti-NMDA receptor encephalitis was described quite recently, explaining why the exact mechanism remains still unknown. For this study purified antibodies from anti-NMDA receptor encephalitis patients were used to stain NMDA receptor transfected HEK cells and hippocampal mouse neurons. These samples were subsequently imaged with dSTORM and analyzed. Measurements on HEK cells confirmed that the autoantibodies bind to the NR1 subunit. Using dSTORM, the binding sites of these antibodies at the neurons were imaged for the first time with super-resolution microscopy. The receptors are densely localized in synapses and more equally distributed at lower density in extrasynaptic regions. Based on Ripley’s H function synaptic clusters with a diameter of ~ 90 nm and ~ 500 localizations were determined while the extrasynaptic smaller clusters have a median diameter of ~ 70 nm and ~ 100 localizations per cluster. These first results form the basis for further investigations on the mechanism of anti-NMDA receptor encephalitis.

名古屋大学博士学位論文 学位の種類:博士(医療技術学) (課程) 学位授与年月日:平成23年3月25日

alpha-TEA (alpha-tocopherol ether linked acetic acid) has been shown to induce apoptosis in human prostate, ovarian and breast cancer cells in culture and in xenograft models by promoting pro-apoptotic pathways and inhibiting anti-apoptotic pathways. Studies investigated the ability of alpha-TEA to induce apoptosis in human hematological malignant cell lines Jurkat, Raji and U266, representing T cell leukemia, B cell lymphoma and multiple myeloma, respectively. The three cell lines were cultured in the presence of different concentrations of alpha-TEA for different time periods, and examined for apoptosis by annexin V – FITC analyses, DAPI staining, and western blotting for poly (ADP-ribose) polymerase cleavage. alpha-TEA induced apoptosis in all three cell lines in a dose and time dependent manner. Levels of pro-apoptotic molecules DR5, c-Jun N-terminal protein kinase (JNK), C/EBP homologous protein (CHOP), caspase 9, and caspase 3 were upregulated in alpha-TEA treated cells in comparison to vehicle controls. Caspase 8 was activated in Jurkat and U266 cells but not in Raji cells. Apoptosis and pro-death signaling mediators were blocked by ceramide inhibitor, desipramine. The anti-apoptotic nuclear factor kappa B (NF-[kappa]B) signaling pathway was down-regulated in alpha-TEA treated Raji and U266 cells. Combinations of omega-3 fatty acid docosahexaenoic (DHA) and alpha-TEA significantly enhanced apoptosis in Jurkat cells in comparison to single treatments and vehicle control. In summary, alpha-TEA induced apoptosis in the malignant hematological cell lines is via shared and distinct pathways. ASMase/ceramide-mediated JNK activation and endoplasmic reticulum (ER) stress mitochondrial dependent apoptosis are involved in alpha-TEA induced apoptosis in the three cell lines; however, the cell lines exhibit cell type-specific responses to alpha-TEA: activation of death receptor/caspase 8 pathway is involved in Jurkat cells, suppression of NF-[kappa]B signaling is involved in Raji cells, and the U266 cells share both of these pathways for the induction of apoptosis. / text

No description available.

The purpose of this project was to determine how Dlc-2 and Rho signaling modulate the ceramide induction of PGP synthase. This induction was studied at the transcriptional, post-transcriptional, and post-translational levels using cell culture, Real-Time RT-PCR, protein purification, phage display, and western blotting techniques. We have demonstrated that the PGP synthase gene is not controlled at the transcriptional level by ceramide and Rho, nor is the mRNA stability of PGP synthase affected. However, ceramide and Rho do seem to exhibit translational or post-translational control over the PGP synthase protein. The relationships between Dlc-2 (and Rho), ceramide, and PGP synthase (and CL) are important to understand. All three are involved in cancer and apoptotic responses. The knowledge gained by the experiments discussed in this thesis will contribute to an understanding of how these proteins and lipids interact. This knowledge may then be used in the future to develop cancer treatments.