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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Collective Epithelial Cell Migration in vitro Driven by Mechanical and Chemical Cues

Loureiro, Maria Jimena 05 December 2013 (has links)
Cells in vivo respond to chemical and mechanical cues in the environment. In fact, it is the resulting migration of cells as a cohesive group that underlies embryonic morphogenesis, wound repair and cancer tumour development and invasion. Techniques have been developed to investigate chemotaxis, haptotaxis and mechanotaxis – the directional movement of cells in response to soluble chemical cues, substrate-bound chemical cues and mechanical cues respectively. Most of the existing tools however, have been designed for and applied to the investigation of single cell migration. Given its importance in vivo, there is a need for adapting these methods and applying them to characterize directed collective cell migration. The main objective of my thesis was to engineer tools and quantitative methods to investigate collective cell migration and use them to compare single and collective migration in response to mechanical cues and substrate-adhered chemical cues in vitro.
2

Collective Epithelial Cell Migration in vitro Driven by Mechanical and Chemical Cues

Loureiro, Maria Jimena 05 December 2013 (has links)
Cells in vivo respond to chemical and mechanical cues in the environment. In fact, it is the resulting migration of cells as a cohesive group that underlies embryonic morphogenesis, wound repair and cancer tumour development and invasion. Techniques have been developed to investigate chemotaxis, haptotaxis and mechanotaxis – the directional movement of cells in response to soluble chemical cues, substrate-bound chemical cues and mechanical cues respectively. Most of the existing tools however, have been designed for and applied to the investigation of single cell migration. Given its importance in vivo, there is a need for adapting these methods and applying them to characterize directed collective cell migration. The main objective of my thesis was to engineer tools and quantitative methods to investigate collective cell migration and use them to compare single and collective migration in response to mechanical cues and substrate-adhered chemical cues in vitro.
3

Collective cell migration of smooth muscle and endothelial cells: impact of injury versus non-injury stimuli

Ammann, Kaitlyn R., DeCook, Katrina J., Tran, Phat L., Merkle, Valerie M., Wong, Pak K., Slepian, Marvin J. January 2015 (has links)
BACKGROUND: Cell migration is a vital process for growth and repair. In vitro migration assays, utilized to study cell migration, often rely on physical scraping of a cell monolayer to induce cell migration. The physical act of scrape injury results in numerous factors stimulating cell migration - some injury-related, some solely due to gap creation and loss of contact inhibition. Eliminating the effects of cell injury would be useful to examine the relative contribution of injury versus other mechanisms to cell migration. Cell exclusion assays can tease out the effects of injury and have become a new avenue for migration studies. Here, we developed two simple non-injury techniques for cell exclusion: 1) a Pyrex® cylinder - for outward migration of cells and 2) a polydimethylsiloxane (PDMS) insert - for inward migration of cells. Utilizing these assays smooth muscle cells (SMCs) and human umbilical vein endothelial cells (HUVECs) migratory behavior was studied on both polystyrene and gelatin-coated surfaces. RESULTS: Differences in migratory behavior could be detected for both smooth muscle cells (SMCs) and endothelial cells (ECs) when utilizing injury versus non-injury assays. SMCs migrated faster than HUVECs when stimulated by injury in the scrape wound assay, with rates of 1.26 % per hour and 1.59 % per hour on polystyrene and gelatin surfaces, respectively. The fastest overall migration took place with HUVECs on a gelatin-coated surface, with the in-growth assay, at a rate of 2.05 % per hour. The slowest migration occurred with the same conditions but on a polystyrene surface at a rate of 0.33 % per hour. CONCLUSION: For SMCs, injury is a dominating factor in migration when compared to the two cell exclusion assays, regardless of the surface tested: polystyrene or gelatin. In contrast, the migrating surface, namely gelatin, was a dominating factor for HUVEC migration, providing an increase in cell migration over the polystyrene surface. Overall, the cell exclusion assays - the in-growth and out-growth assays, provide a means to determine pure migratory behavior of cells in comparison to migration confounded by cell wounding and injury.
4

Engineered Molecular Probes for Systematic Studies of Cellular Response in Collective Cell Migration

Riahi, Reza January 2013 (has links)
The investigation of complex biological processes, such as wound healing, cell migration, cancer cell invasion, and gene regulatory networks can be benefited tremendously by novel biosensing techniques with high stability and spatiotemporal resolution. In particular, molecular probes with qualities including high stability, sensitivity, and specificity are highly sought-after for long-term monitoring of gene expression in individual cells. Among different single-cell analysis techniques oligonucleotide optical probes is a promising detection method to monitor the dynamics of cellular responses. Herein, the design and optimization of double-stranded LNA probes are first investigated. With alternating DNA/LNA monomers for optimizing the stability and specificity, we show that the probe is highly stable in living cells and is capable of detecting changes in gene expression induced by external stimuli. Using dsLNA probes we then demonstrate the novel approaches to monitor the spatiotemporal gene expression response during cell injury. Our results also suggest a potential autoregulatory role of Nrf2 in injury induced EMT. We also show that the signaling level of dsLNA probe can serve as a molecular signature for the leader cells near the wound which allows us to track the behaviors of leader cells during collective cell migration. Finally multimodal GNR-LNA approach is proposed to map spatiotemporal gene expression profile and reveal dynamic characteristics of heat shock response in photothermal operations.
5

Emergent Leader Cells in Collective Cell Migration in In Vitro Wound Healing Assay

Yang, Yongliang January 2014 (has links)
Collective cell migration is critical for various physiological and pathological processes. In vitro wound healing assay has been widely used to study collective cell migration due to its technical simplicity and ability of revealing the complexity of collective cell migration. This project studies the function and importance of leader cells, the cells pulling cell monolayer migrating into free space, in endothelium and skin epithelial regeneration via plasma lithography enhanced in vitro wound healing assay. Despite leader cells have been identified in in vitro wound healing assays, little is known about their regulation and function on collective cell migration. First, I investigated the role of leader cells in endothelial cell collective migration. I found that the leader cell density is positively related with the cell monolayer migration rates. Second, we used this knowledge to study the effects of arsenic treatment on skin regeneration via in vitro wound healing assay. We found that low concentration of arsenic treatment can accelerate the keratinocyte monolayer migration. We further found that arsenic affected cell migration by modulating leader cell density through Nrf2 signaling pathway. As a conclusion of these studies, we evaluated the function of leader cells in collective cell migration, and elucidated the mechanism of arsenic treatment on skin regeneration.
6

Etude du rôle de la P-cadhérine dans la migration cellulaire collective / The rôle of P-cadherin in collective cell migration

Plutoni, Cédric 21 October 2014 (has links)
La migration cellulaire collective (MCC) est un processus fondamental qui intervient au cours du développement, de la réparation tissulaire, de l'invasion tumorale et de la formation de métastases. Les cellules qui migrent collectivement possèdent deux types d'interaction avec leur environnement : i) l'un avec leur substrat et ii) l'autre avec les cellules voisines en migration. Deux grandes familles de protéines permettent ces interactions ainsi que la génération de forces mécaniques: i) la famille des intégrines (les récepteurs de la matrice extracellulaire) et ii) la famille des cadhérines (formant les jonctions intercellulaires). Les cadhérines classiques sont impliquées dans la formation des jonctions intercellulaires et sont les principaux acteurs de la MCC au cours du développement normal et tumoral. La transmission de force entre les cellules en migration est nécessaire à leur cohésion et à la communication des cellules entre elles. Des études récentes montrent que les cadhérines sont nécessaires à la transmission des forces au substrat. Néanmoins, les processus par lesquels les cadhérines agissent sur ses forces dans le contexte d'une MCC restent inexplorés. Nous avons identifié l'expression de la P-cadhérine comme étant associée à l'agressivité du rhabdomyosarcome de type alvéolaire (ARMS), sous type ayant le plus mauvais pronostic car très invasif. Nos données, ainsi que de récentes études qui démontrent que la P-cadhérine est impliquée dans l'agressivité des tumeurs du sein, nous ont conduits à étudier le rôle de cette cadhérine dans la migration cellulaire, processus majeur dans le développement tumoral. Nous nous sommes intéressés à l'impact de l'expression de la P-cadhérine sur la migration des myoblastes murins normaux C2C12. Pour ce faire nous utilisons un test de migration in vitro en 2D proche du test de blessure qui consiste à retirer une barrière physique induisant la migration des cellules vers l'espace libre ainsi créé. Nous avons pu monter que l'expression de la P-cadhérine dans les myoblastes C2C12 augmente les paramètres caractéristiques d'une MCC in vitro : la vitesse, la polarité, la persistance et la directionalité de la migration des cellules du front et au sein du feuillet. De plus, à l'aide de techniques microscopiques de mesure des forces nous avons montré une augmentation des forces intercellulaires allant du front vers le feuillet cellulaire au cours de la migration des cellules exprimant la P-cadhérine. Cela suggère une augmentation de la cohésion cellulaire. L'ensemble de ces résultats démontrent clairement que l'expression de la P-cadhérine induit une MCC. Nous avons aussi mesuré et cartographié les forces de traction au substrat connues pour être le moteur de la migration cellulaire. Nos données indiquent que l'expression de la P-cadhérine augmente l'anisotropie de ces forces de traction ainsi que leur intensité, et ce, uniquement au front de migration. L'expression de la P-cadhérine remodèle et stimule la dynamique des plaques focales d'adhérence à cet endroit.Afin de mieux comprendre comment la P-cadhérine modifie la dynamique des adhésions focales et augmente les forces de traction, nous avons étudié l'activité spatiotemporelle des petites protéines G de la famille Rho. Nous montrons que l'expression de la P-cadhérine active Rac1 et Cdc42 au front de migration, entrainant ainsi le remodelage et l'organisation des plaques focales d'adhérence à cet endroit. L'inhibition de Rac1 et Cdc42 bloque la MCC induite par la P-cadhérine. Pour conclure, en combinant la mesure des paramètres de migration cellulaire avec la mesure des forces mécaniques intercellulaires et au substrat, nous avons démontré que la P-cadhérine induit un comportement collectif des cellules et ce dépendamment de l'activité de Rac1 et de Cdc42. De plus nous mettons en avant l'existence de propriétés mécano-transductrices de cette cadhérine au cours de la MCC. / Collective cell migration (CCM), the coordinated movement of multiple cells that are connected by cell-cell adhesion, is a fundamental process in development, tissue repair and tumor invasion and metastasis. Cells part of a moving collective have two different types of interactions, i) one with the substratum, and ii) one with surrounding moving cells. Two protein families allow these interactions and also the generation of mechanical forces: i) typically integrins on the underlying extracellular matrix (ECM) and ii) cadherins at intercellular adhesion sites. Classical cadherins are involved in cell-cell adhesion and are major drivers of collective cell migration in embryonic development and tumorigenesis.Mechanical coupling between migratory cells may result in the production of force-dependent signals by which the cells influence each other. Moreover, whereas recent data showed that cadherin-dependent cell-cell adhesions are important for the force transmission to the ECM, how intercellular adhesion impacts on cell-ECM forces in the context of collective cell migration is totally unexplored. We identified P-cadherin expression to be associated with alveolar rhabdomyosarcoma (ARMS) aggressiveness, tumors with a bad prognosis due to the propensity for early and wide dissemination. Our data and recent findings showing that P-cadherin is associated with breast tumor invasiveness and aggressiveness, led us to investigate the role of P-cadherin in cell migration. We analyzed cell migration of normal mouse C2C12 myoblasts that express P-cadherin using a “wound-healing like assay” in which migration is analyzed after removal of a physical barrier. We observed that P-cadherin expression in C2C12 myoblasts increased the speed, polarity, persistence and directionality of migration toward the free space of both cells at the border and cells into the sheet. Using monolayer stress microscopy we showed that P-cadherin increases inter-cellular stresses and force transmission across the cell sheet. According to those observations we concluded that P-cadherin induces CCM.Traction forces exerted by the cells on the substrate are important for cell migration. Using traction force microscopy, we demonstrated that P-cadherin expression increases the traction forces anisotropy specifically at the multicellular leading row. To better understand how these mechanical signals induce CCM, we studied both the organization of the focal adhesions and the spatio-temporal activity of Rho GTPase. We showed that P-cadherin expression activates Rac1 and Cdc42 which induces extensive focal adhesions remodeling at the leading edge of cells at the leading row. Rac1 and Cdc42 inhibition impaired P-cadherin-induced CCM, focal adhesion remodeling and forces generation. In conclusion, combining a detailed measurement of the parameters of cell migration with physical measure of the intercellular stresses and traction forces, we have shown that P-cadherin promotes collective behavior of cells during migration through Rac1 and Cd42 activity. Also, those results provide evidence for mechano-transmission properties of P-cadherin during collective cell migration.
7

Collective cell motility in 3-dimensions: dynamics, adhesions, and emergence of heterogeneity

Sharma, Yasha 17 February 2016 (has links)
Collective cell migration is ubiquitous in biology, from development to cancer; it is influenced by heterogeneous cell types, signals and matrix properties, and requires large scale regulation in space and time. Understanding how cells achieve organized collective motility is crucial to addressing cellular and tissue function and disease progression. While current two-dimensional model systems recapitulate the dynamic properties of collective cell migration, quantitative three-dimensional equivalent model systems have proved elusive. The overarching hypothesis of this work is that cell collectives are heterogeneous in nature; and that the influence of biochemical, physical, and mechanical factors combined leads to diverse physical behaviors. The central goal of this work is to establish standard tools for the understanding of 3D collective cell motility by treating individual cell-collectives as independent entities. An experimental model studies cell collectives by tracking individual cells within cell cohorts embedded in three dimensional collagen scaffolding. A computational model of 3-dimensional multi-scale self-propelled particles recreates experimental data and accounts for intercellular adhesion dynamics. A custom algorithm identifies cellular cohorts from experimental and simulated data so these may be treated as independent entities. A second custom algorithm quantifies the temporal and spatial heterogeneity of motion in cell cohorts during ‘motility events’ observed in experiments and simulations. The results show that cell-cohorts in 3D are dynamic with spatial and temporal heterogeneity; cohesive motility events can emerge without an external driving agent. Simulated cohorts are able to recreate experimental motility event signatures. Together these model systems and analytical techniques are some of the first to address collective motility of adhesive cellular cohorts in 3-dimensions.
8

Quantitative analysis of coordinated epithelial rotation on a two-dimensional discoidal pattern / 二次元円盤状パターンを用いた上皮細胞集団の回転運動についての定量解析

LUO, Shuangyu 23 May 2023 (has links)
京都大学 / 新制・課程博士 / 博士(生命科学) / 甲第24822号 / 生博第502号 / 新制||生||67(附属図書館) / 京都大学大学院生命科学研究科統合生命科学専攻 / (主査)教授 上村 匡, 教授 見学 美根子, 教授 鈴木 淳 / 学位規則第4条第1項該当 / Doctor of Philosophy in Life Sciences / Kyoto University / DGAM
9

Etude de la régulation du gène codant le récepteur de chimiokine CXCR4 dans le système de la ligne latérale postérieure du poisson-zèbre (danio rerio) / Study of the regulation of the gene encoding the chemokine receptor CXCR4 in the zebrafish (danio rerio) posterior lateral line system

Gamba, Laurent 07 December 2010 (has links)
La ligne latérale postérieure embryonnaire du poisson-zèbre est composée d'un ensemble d'organes sensoriels, appelés neuromastes, qui permet au poisson de détecter les mouvements de l'eau. Le primordium qui génère la ligne latérale postérieure embryonnaire migre de la tête vers l'extrémité de la queue le long d'une piste de cellules sécrétrices de SDF-1, et dépose des groupes de cellules précurseurs des neuromastes. Cette migration dépend de la présence de CXCR4, le récepteur de SDF-1, dans la région en tête du primordium et de la présence du second récepteur de SDF-1, CXCR7, dans la région en queue du primordium. L'objectif de ma thèse est d'identifier des régulateurs de l'expression de cxcr4b au sein du primordium. Nous avons montré que l'inactivation du récepteur des strogènes ESR1 induit l'expression ectopique de cxcr4b dans les cellules de queue du primordium alors que sa surexpression induit une réduction du domaine d'expression de cxcr4b, suggérant que ESR1 agit comme un répresseur de cxcr4b. Cette découverte expliquerait pourquoi les strogènes diminuent la capacité métastatique des cellules du cancer du sein strogéno-dépendants. L'inactivation de ESR1 conduit aussi à l'extinction de l'expression de cxcr7b dans les cellules de queue du primordium, cet effet étant toutefois indirect et induit par la signalisation ectopique SDF-1/CXCR4 dans ces cellules. L'inactivation et la surexpression de ESR1 provoquent toutes deux une migration défectueuse du primordium, confirmant l'importance de ce récepteur dans le contrôle de la migration dépendante de SDF-1. Nous avons aussi montré qu'un effecteur majeur de la signalisation Wnt canonique, LEF-1, contribue au contrôle de l'expression de cxcr4b et de cxcr7b dans les cellules en tête du primordium. Nous montrons que la prolifération cellulaire, qui assure une taille constante du primordium en dépit des dépositions successives de cellules, est réduite en absence de LEF-1, et que cela conduit à une ligne latérale postérieure incomplète. / The zebrafish embryonic posterior lateral line is componed by a set sense organs, called neuromasts, allowing the fish to detect the water movements. The primordium that generates the embryonic posterior lateral line of zebrafish migrates from the head to the tip of the tail along a trail of SDF-1-producing cells, and deposits cell groups that will become the neuromasts. This migration critically depends on the presence of the SDF-1 receptor CXCR4 in the leading region of the primordium and on the presence of a second SDF1 receptor, CXCR7, in the trailing region of the primordium. The aim of my thesis is to identify regulators of the cxcr4b expression within the primordium. Here we show that inactivation of the estrogen receptor ESR1 results in ectopic expression of cxcr4b throughout the primordium, whereas ESR1 overexpression results in a reciprocal reduction in the domain of cxcr4b expression, suggesting that ESR1 acts as a repressor of cxcr4b. This finding could explain why estrogens significantly decrease the metastatic ability of ESR-positive breast cancer cells. ESR1 inactivation alsoleads to extinction of cxcr7b expression in the trailing cells of the migrating primordium; this effect is indirect, however, and due to the down-regulation of cxcr7b by ectopic SDF-1/CXCR4 signaling in the trailing region. Both ESR1 inactivation and overexpression result in aborted migration, confirming the importance of this receptor in the control of SDF-1-dependent migration. We also showed that a major effector of the canonical Wnt signaling, LEF-1, contributes to the control of both cxcr4b and cxcr7b expression in the leading cells of the primordium. We show that cell proliferation, which ensures constant primordium size in spite of sucessive rounds of cell deposition, is reduced upon lef1 inactivation, leading in a truncated posterior lateral line.
10

Cellular dynamics in Zebrafish optic cup morphogenesis

Sidhaye, Jaydeep 22 January 2018 (has links) (PDF)
Organ formation is an important step during development of an organism that combines different scales from the molecular to the tissue level. Many organogenesis phenomena involve epithelial morphogenesis, where sheets of cells undergo rearrangements to form complex architectures – organ precursors, which subsequently develop into mature organs. Timely development of the characteristic architectures of the organ precursors is crucial for successful organogenesis and is determined by the choice of epithelial rearrangements that organise the constituent cells in space and time. However, for many organogenesis events the cellular dynamics underlying such epithelial rearrangements remain elusive. In the work presented here, I investigated the morphogenesis of the hemispherical retinal neuroepithelium (RNE), that serves as an organ precursor of the neural retina. Formation of RNE is an important event in vertebrates that shapes the optic cup and sets the stage for subsequent eye development. I investigated RNE morphogenesis in the developing zebrafish embryo by visualising and investigating the cellular dynamics of the process in vivo. My findings show that the zebrafish RNE is shaped by the combined action of two different epithelial rearrangements – basal shrinkage of the neuroepithelial cells and involution of cells at the rim of the developing optic cup. The basal shrinkage of the neuroepithelial cells bends the neuroepithelial sheet and starts the process of invagination. However, my results show that the major player in RNE morphogenesis is rim involution. Rim involution translocates prospective RNE cells to their designated location in the invaginating layer and contributes to RNE invagination. My work unravelled the so far unknown mechanism of rim involution. I show that the rim cells involute by collective epithelial migration using directed membrane protrusions and dynamic cell-matrix contacts. If rim migration is perturbed, the prospective RNE cells cannot reach the invaginating layer. As a result, these migration-defective cells attain the RNE fate at an ectopic location and disrupt the tissue architecture. Therefore, rim migration coordinates the cellular location with the timing of RNE fate determination and orchestrates RNE morphogenesis in space and time. Overall, my work highlights how morphogenetic processes shape the organ precursor architecture and ensure timely organ formation. These findings provide important insights not only for eye development but also for epithelial morphogenesis and organogenesis in many other systems. / Für die Entwicklung eines Organismus ist die Bildung von Organen (Organogenese) von zentraler Bedeutung. Organogenese umfasst Prozesse auf allen Ebenen der Längenskala: von der molekularen Ebene, der Gewebeebene, bis hin zur Ebene des ganzen Organismus. Viele Phänomene der Organogenese beinhalten dabei Veränderungen von Epithelien, bei der sich Schichten von Zellen zu komplexen Strukturen - Organvorläufern - umwandeln. Diese entwickeln sich später zu vollständigen Organen. Die rechtzeitige Entwicklung der charakteristischen Architektur der Organvorläufer ist entscheidend für eine erfolgreiche Organogenese und wird durch die Wahl der epithelialen Umwandlungsprozessen bestimmt, welche die Zellen in Raum und Zeit koordinieren müssen. Für viele dieser Prozesse ist jedoch genau diese zugrundeliegende Zelldynamik unklar. In der hier vorgestellten Arbeit untersuchte ich die Bildung des hemisphärischen retinalen Neuropepithels (RNE). Das RNE ist der Organvorläufer der neuralen Retina, weshalb dessen korrekte Bildung die Voraussetzung für die korrekte Entwicklung der Augen ist. Ich untersuchte die RNE-Morphogenese in sich entwickelnden Zebrafisch-Embryos durch Visualisierung und Untersuchung der zellulären Dynamik der beteiligten Prozesse in vivo. Meine Ergebnisse zeigen, dass das RNE in Zebrafischen durch die kombinierte Umwandlung von zwei verschiedenen Epithelien geformt wird. Zum einen findet eine Verkleinerung des basalen Prozesses der neuroepithelialen Zellen statt, zum anderen die Involution von Randzellen. Die basale Verkleinerung der neuroepithelialen Zellen verbiegt die neuroepitheliale Schicht und führt zur Einstülpung des RNE. Meine Ergebnisse zeigten allerdings, dass Involution von Randzellen noch bedeutsamer für die RNE-Morphogenese ist. Die involution von Randzellen transportiert potenzielle RNE-Zellen in das Neuroepithel und trägt zur RNE-Einstülpung bei. Die Bedeutung meiner Arbeit liegt darin, den bisher unbekannten Mechanismus der Randzell-Involution entdeckt zu haben. Ich zeigte, dass die Randzellen sich aktiv durch kollektive epitheliale Migration bewegen indem sie gerichtete Membranforsätze und dynamische Zell zu Matrix Kontakte etablieren. Wird die Migration der Randzellen inhibiert, so führt dies dazu, dass diese Zellen die eingestülpte RNE Schicht nicht erreichen. Sie landen dann an den falschen Positionen, wo sie die Gewerbearchitektur stören können. Daher koordiniert die Randzellmigration die Position der Zellen und orchestriert die RNE-Morphogenese in Raum und Zeit. Insgesamt zeigt meine Arbeit, wie morphogenetische Prozesse die Organvorläuferarchitektur prägen und eine rechtzeitige Organbildung sicherstellen. Diese Erkenntnisse sind sowohl für das Verständnis der Augenentwicklung, als auch für das der epithelialen Morphogenese und Organogenese in anderen Systemen von großer Bedeutung.

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