Research aimed at optimizing diagnostic laboratory procedures is central to the development of effective bovine viral diarrhoea virus (BVDV) control programmes. BVDV is a single-stranded RNA virus that crosses the placenta to infect foetuses resulting in reproductive losses due to foetal death or persistently infected (PI) calves that usually die early in life. Persistently infected animals are widely accepted to be the primary reservoir of BVDV and the largest source of BVDV infection. Persistently infected animals that survive calfhood are at risk of developing mucosal disease in later life which is a severe and usually fatal condition. In addition, persistently infected calves that become replacement heifers in the herd may experience significant morphological changes that occur in the ovaries which can result in impaired reproductive performance. This poses important challenges to overall animal/herd health and causes losses to the cattle industry. Long-term storage of bovine ear notch samples from calves persistently infected (PI) with BVDV may affect the ability of diagnostic assays to efficiently detect the virus. This study assessed the effects of 1) long-term storage of formalin-fixed samples at room temperature to detect BVD viral antigen with the aid of immunohistochemistry (IHC), 2a) long-term storage of fresh ear notch samples kept at -20°C, and 2b) long term storage of phosphate-buffered saline (PBS) ear notch supernatant kept at -20°C on the ability of an antigen-capture ELISA (AC-ELISA) to detect viral antigen. Previous studies have verified 100% sensitivity for both AC-ELISA on ear notch supernatant and immunohistochemical testing of ear notches to detect BVDV provided that samples are properly collected and stored. In this study, ear notch samples from seven animals were subjected to prompt formalin fixation and fresh samples to prolonged storage at -20°C. Frozen ear notches and ear notch supernatant yielded positive results on AC-ELISA for the duration of the study, i.e. 6 months, and OD values remained significantly within range. There was no significant difference between storing fresh ear notch samples and PBS ear-notch supernatant at -20°C. However, positive IHC staining on formalin-fixed ear notches started to fade away between day 17 and day 29 when stored at room temperature. We conclude that fresh ear notches could safely be stored at -20°C for a period of 6 months for detecting BVD viral antigen at a later stage. Copyright / Dissertation (MSc)--University of Pretoria, 2009. / Veterinary Tropical Diseases / unrestricted

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Bovine viral diarrhoea virus (BVDV) has emerged as one of the economically important pathogens in cattle populations with a worldwide distribution and causing a complex of disease syndromes. It is a single-stranded RNA virus of the genus Pestivirus in the family Flaviviridae. Two genotypes (1 and 2) of BVDV exist and can be distinguished on the basis of the 5' non-coding region (5' NCR) of the genome using real-time PCR. This technique is more sensitive, specific, less time consuming and has reduced risks of cross contamination of samples compared to a conventional PCR. Limited information exists on BVDV genetic subtypes in South Africa. The aim of this study was to determine the genotypes of BVDV currently circulating in South African feedlots. A total of 279 specimens (219 tissue samples, 59 trans-tracheal aspirates and one blood sample) were collected from dead and living cattle. Pooled homogenates from the same animals were prepared and total RNA was extracted from 200 μl of the homogenates using the RNeasy Mini Kit (Qiagen) as described by the manufacturer. A screening test was performed on the pooled samples and positive pools were investigated individually. The Cador BVDV Type 1/2 RT-PCR Kit (Qiagen, Hilden, Germany) was used for the real-time PCR assay. The PCR was performed on a Lightcycler® V2 (Roche Diagnostics, Mannheim, Germany) real-time PCR machine and the amplified products were detected via fluorescent dyes. The results were read at 530 and 640 nm for BVDV 1 and 2, respectively. Bovine viral diarrhoea virus was detected in a total of 103 samples that included 91 tissue samples, one blood sample and 11 trans-tracheal aspirates. Eighty five of the strains were genotype 1 strains and 18 were genotype 2. These results represent the first documented evidence for the presence of BVDV genotype 2 in South African cattle. / Dissertation (MSc)--University of Pretoria, 2010. / Veterinary Tropical Diseases / unrestricted

Thèse numérisée par la Division de la gestion de documents et des archives de l'Université de Montréal.

Thèse numérisée par la Division de la gestion de documents et des archives de l'Université de Montréal