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Intraspecific Variation in the Populus balsamifera Drought Response: A Systems Biology ApproachHamanishi, Erin T. 07 August 2013 (has links)
As drought can impinge significantly on forest health and productivity, the mechanisms by which forest trees respond to drought is of interest. The research presented herein examined the intra-specific variation in the Populus balsamifera drought response, examining the potential role of the transcriptome to configure growth, metabolism and development in response to water deficit. Amassing evidence indicates that different species of Populus have divergent mechanisms and Three lines of inquiry were pursued to investigate the intraspecific variation the drought response in P. balsamifera.
First, the transcriptome responses of six genotypes of P. balsamifera were examined using Affymetrix Poplar GeneChips under well-watered and water-deficit conditions. A core species-level transcriptome response was identified. Significantly, intraspecific variation in the drought transcriptome was also identified. The data support a role for genotype-derived variation in the magnitude of P. balsamifera transcriptome remodelling playing a role in conditioning drought responsiveness.
Second, the impact of drought-stress induced declines in stomatal conductance, as well as an alteration in stomatal development in two genotypes was examined. Patterns of transcript abundance of genes hypothesised to underpin stomatal development had patterns congruent with their role in modulation of stomatal development. These results suggest that stomatal development may play a role as a long-term mechanism to limit water loss from P. balsamifera leaves under conditions of drought-stress.
Finally, the drought-induced metabolome of six P. balsmaifera genotypes was interrogated. Metabolite profiling reveled amino acids such as isoleucine and proline and sugars such as galactinol and raffinose were found with increased abundance, whereas TCA intermediates succinic and malic acid were found with decreased abundance in response to drought. Comparative analysis of the metabolome and the transcriptome revealed genotypic-specific variation in energy and carbohydrate metabolism.
Taken together, the findings reported in this thesis form a foundation to understand the basis of intraspecific variation in the drought response in P. balsamifera. Transcripts and metabolites that contribute to within-species differences in drought tolerance were defined. These molecular components are useful targets for both future study, as well as efforts aimed at protecting and growing trees of this important species under challenging environmental conditions.
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Climate Warming and Drought Effects on Pinus and Juniperus Species: Contrasting Drought Tolerance Traits Limit Function and Growth in Tree SeedlingsLenoir, Katherine Judith 03 October 2013 (has links)
Junipers and pines exhibit contrasting patterns of growth decline and mortality with climate change-type warming and drought; yet, the underlying physiological mechanisms are not fully understood. Does warming exacerbate the effects of drought on gas exchange physiology and growth? Do the combined effects of drought and warming differ for pines and junipers? To what extent do isohydric vs. anisohydric responses to water limitation in pines and junipers constrain net leaf CO2 exchange and plant growth response to drought and warming? To address these questions, we compared responses of leaf gas exchange and growth in seedlings of juniper (Juniperus scopulorum, J. virginiana) and pine (Pinus edulis, P. taeda) species of contrasting arid and mesic origin in a study of combined warming (ambient, +1.8 °C) and enhanced summer drought (long-term mean, -40%). Warming and enhanced summer drought each reduced photosynthesis and growth and effects were largely independent, suggesting that warming exacerbates drought effects on growth. Enhanced summer drought and warming had distinct impacts on photosynthetic carbon gain that were differentially revealed depending upon soil water content. Warming reduced light-saturated net photosynthesis (Asat) under low soil water contents, whereas carry-over effects of drought treatment were evident under well-watered conditions. Short-term soil drying led to greater reduction of Asat in pines (-51%) rather than junipers (-30%). Under short-term water-limited conditions, Asat and gs were about two-times higher for junipers compared to pines. Relative growth rate of junipers declined with warming (-28%) and drought (-50%) treatments. In contrast, pine growth and Asat declined more with warming than drought. Only P. edulis exhibited increased mortality in response to warming and drought, reaching 75% in the combined warming and drought treatment. Diminished sensitivity of R to water limitations, coupled with steeper reductions in Asat with decreasing soil water content in isohydric pines compared to anisohydric junipers could account for the greater sensitivity of pines to warming and drought under climate change.
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Trehalose Metabolism In Wheat And Identification Of Trehalose Metabolizing Enzymes Under Abiotic Stress ConditionsTarek, El-bashiti 01 January 2003 (has links) (PDF)
Trehalose (& / #945 / -D-glucopyranosyl-1,1-& / #945 / -D-glucopyranoside) is a non reducing
disaccharide of glucose that occurs in a large variety of organisms, ranging from bacteria to invertebrate animals, where it serves as an energy source or stress protectant. Until recently, only few plant species, mainly desiccation tolerant & / #8216 / resurrection& / #8217 / plants, were
considered to synthesize trehalose. Although most plant species do not appear to accumulate easily detectable amounts of trehalose, the discovery of genes for trehalose biosynthesis in Arabidopsis and in a range of crop plants suggests that the ability to
synthesize trehalose is widely distributed in the plant kingdom. In this study, three wheat cultivars (Triticum aestivum L.) Tosun, Bolal (stress tolerant) and Ç / akmak (stress
sensitive) were analysed for the presence of trehalose. Using gas chromatography-mass
spectrometry (GC-MS) analysis, trehalose was unambiguously identified in extracts from seeds and seedlings of three different wheat cultivars (Bolal, Tosun and Ç / akmak). The trehalose amount was quantified by high performance liquid chromatography
connected with refractory index detector. Effects of drought and salt stress on trehalose contents of wheat cultivars were studied at seedling level and trehalose analysis was achieved both on shoot and root tissues. It was found that trehalose had accumulated under salt and drought stress conditions in all wheat cultivars. The highest trehalose
accumulation was detected in roots of Bolal cultivar under drought stress condition.
Furthermore, trehalose metabolizing enzymes / trehalose-6-phosphate synthase (TPS)
and trehalase enzyme activities were measured in roots and shoots of Bolal and Ç / akmak cultivars under control, salt and drought stress conditions. The most interesting results that we found that TPS activity sharply increased under stress conditions. The activity of
TPS in roots under drought stress condition was the highest and reached to 3-4 times of its activity under control condition. The increase in the activity of TPS showed parallelism with trehalose accumulation under stress condition. Trehalase activity in Bolal cultivar decreased under both salt and drought stress conditions, however there
was no significant change in trehalase activity of Ç / akmak variety.
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Physiological responses of sugarcane to nitrogen and potassium availabilityRanjith, Subasinghe A January 1994 (has links)
Thesis (Ph.D.)--University of Hawaii at Manoa, 1994. / Includes bibliographical references (leaves 97-114). / Microfiche. / xiii, 114 leaves, bound ill. 29 cm
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Responses of chickpea (Cicer arietinum L.) to zinc supply and water deficits / by Habib Ur Rahman Khan.Khan, Habib Ur Rahman January 1998 (has links)
Bibliography: leaves 201-228. / xvii, 228 leaves : ill. ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / Widespread deficiencies of mineral nutrients in soils along with limited moisture supply are considered major environmental stresses leading to yield losses in chickpea. This study was conducted to determine the zinc requirement of chickpea and the effect on plant water relations. Critical zinc concentration was estimated. It was found that high and low moisture regimes had no effect on critical zinc concentration and that the value remained almost the same in all chickpea genotypes. Sensitivity of 28 chickpea genotypes were evaluated at two zinc levels. Field studies on zinc fertilization in both Australia and Pakistan showed that the application of zinc increased grain yield in all chickpea genotypes. It was found that plants grown under zinc deficiency could not exploit available soil moisture and water use and water use efficiency was reduced, and concluded that high zinc availability may enhance the ability of plants to endure periods of drought by promoting osmotic adjustment. / Thesis (Ph.D.)--University of Adelaide, Dept. of Plant Science, 1999
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Persistence mechanisms of Erodiophyllum elderi, an arid land daisy with a patchy distribution / Louise M. Emmerson.Emmerson, Louise M. (Louise Margaret) January 1999 (has links)
Bibliography: p. 191-200. / 200 p. : ill. (chiefly col.), map (fold.) ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / Persistence mechanisms of Erodiophyllum elderi are investigated in terms of life history strategies and patchy population theory. / Thesis (Ph.D.)--University of Adelaide, Dept. of Botany, 1999
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Evaluation of physiological traits and identification of QTLs for drought tolerance in hexaploid wheat (Triticum aestivum L.).Izanloo, Ali January 2008 (has links)
This study comprised three major parts: a comparative physiological study of drought responses under controlled conditions; a genetic study to construct the skeleton map of a doubled haploid (DH) population; and a quantitative trait loci (QTL) analysis to identify QTLs associated with drought tolerance traits in the field. In the first part (Chapter 3), three cultivars of wheat (Triticum aestivum L.) adapted to South Australian conditions were tested for drought tolerance under cyclic drought in growth rooms and glasshouse. Extensive physiological traits, including stomatal conductance, chlorophyll content and fluorescence, ABA content, water status traits (e.g. osmotic adjustment, RWC and leaf water potential), water soluble carbohydrates (WSC) and carbon isotope discrimination (Δ¹ ³C) were measured during experiments. Through these experiments, the drought responses of the three cultivars were physiologically dissected and the likely processes contributing most to drought tolerance were identified. In the South Australian wheatbelt, cyclic drought is a frequent event, represented by intermittent periods of rainfall which can occur around anthesis and post-anthesis in wheat. Three South Australian bread wheat cultivars, Excalibur, Kukri and RAC875, were evaluated in two growth room experiments under cyclic water-limiting conditions. In the first experiment, where plants were subjected to severe water stress, RAC875 and Excalibur (drought tolerant) showed significantly (P < 0.05) higher grain yield under cyclic water availability compared to Kukri (drought susceptible), producing 44% and 18% more grain yield compared to Kukri, respectively. In the second growth room experiment, where plants were subjected to a milder drought stress, the differences between cultivars were less pronounced, with only RAC875 showing significantly higher grain yield under the cyclic water treatment. Grain number per spike and the percentage of aborted tillers were the major yield components that affected yield under cyclic water stress. Excalibur and RAC875 adopted different morpho-physiological traits and mechanisms to reduce water stress. Excalibur was most responsive to cyclic water availability and showed the highest level of osmotic adjustment (OA), highest stomatal conductance, lowest ABA content and most rapid recovery from stress under cyclic water stress. RAC875 was more ‘conservative’ in its responses, with moderate OA, high leaf waxiness, high chlorophyll content and slower recovery from stress. Within this germplasm, the capacity for osmotic adjustment was the main physiological attribute associated with tolerance under cyclic water stress, which enabled plants to recover from water deficit. In the second part (Chapter 4), the genetic linkage map of a DH population including 368 lines, which was developed from a cross between ‘RAC875’ and ‘Kukri’, was constructed. The genetic linkage map consisted of about 500 molecular markers including ~300 DArT (Diversity array technology) and ~200 SSR (Microsattelite markers). In the third part (Chapter 5), Quantitative Trait Loci (QTLs) linked to plant phenology and production traits under irrigated and drought stress conditions were mapped by means of a DH population. To phenotype the population, 368 DH lines were cultivated in two replicates in five environments (three sites across South Australian wheatbelt in collaboration with Australian Grain Technology (AGT) in 2006, and two trials in Mexico in collaboration with CYMMIT, 2007). Data of grain yield, yield components, maturity related traits and some morpho-physiological traits such as leaf chlorophyll content, leaf waxiness, plant height, peduncle length, flag leaf and spike length were measured. Raw data were then analysed for spatial variation for each single trial using the REML procedure in GenStat (version 6). The DH lines showed significant variation for plant phenology, grain yield and yield components under irrigated and drought stress conditions. QTL analyses were performed using QTLCartographer and QTLNetwork for each trait in each site. Two major QTL for maturity traits were identified on chromosomes 2BS and 2DS corresponding to Ppd-B1 and Ppd-D1, respectively. A region was identified on chromosome 7A that harbored major QTL for grain yield, number of grains per square meter, number of grain per spike and spike fertility under drought stress. For yield data in the irrigated trial, two major QTL were identified on chromosome 3B which were not detected in drought stress environments. By using different datasets in the QTL analysis (splitting the population into two subpopulation based on heading time and also adjusting the phenotypic data for heading time to eliminate heading time effect), a QTL for grain yield was consistently detected on chromosome 7A in drought-affected environments. The coincidence of a drought response index QTL on this chromosome indicated that it might be a QTL for yield response under drought. This study demonstrated that the region on the long arm of chromosome 7A identified for grain yield and yield components is a drought response QTL which is closely linked to, but separate from, a heading time QTL. This QTL cluster on chromosome 7A could be used as a good target for positional cloning and gene isolation. However further work would be required to confirm and validate the identified QTLs in this preliminary QTL analysis. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1340056 / Thesis (Ph.D.) -- University of Adelaide, School of Agriculture, Food and Wine, 2008
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Tissue-specific responses to water deficit in the New Zealand xerophytic tussock species Festuca novae-zelandiae : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Plant Biology at Massey University, Palmerston North, New ZealandClark, Gregory Thomas January 2005 (has links)
Festuca novae-zelandiae (Hack.) Cockayne is an endemic New Zealand perennial tussock forming grass of the family Poaceae. Morphologically F. novae-zelandiae exhibits a number of leaf adaptations associated with dehydration postponement as reflected in the climatic distribution of this species and its occurrence as a physiognomic dominant grass in semi arid short-tussock grasslands. Biochemical studies into the drought tolerance of this species have indicated the occurrence of tissue specific responses with respect to abscisic acid (ABA) and proline accumulation and protein turnover suggestive of a preferential protection of the tiller base and associated meristematic zones at the expense of lamina tissues. Further tissue specific biochemical responses to water-deficit stress in F. novae-zelandiae have been investigated. Changes in water-soluble carbohydrates (WSC) were monitoured over a 49-day dry-down period (decline in soil water content from 30% to 4%) in consecutive leaf segments comprising the leaf base (meristem region), elongation zone, the enclosed and exposed lamina, as well as basal sheath segments from the two next oldest leaves. In fully hydrated leaf tissues polymers of fructose (fructans) were the main WSC present and were mainly low molecular weight fructans of the inulin and neokestose series with the average degree of polymerization (DP) of fructan pools from 6 to 9. The highest fructan concentrations were present towards the leaf base. Fructan concentrations decreased over the course of the dry-down, although remained significantly higher in the meristem region of the tiller base with respect to any other tissue, until tissue water content fell below 45%. By day 49 of the dry-down period, the average DP of the fructan pool in tissues was from 3 to 5. Sucrose content increased in each tissue during the course of the dry-down, and was highest at the leaf base, where a concentration of 200 µmol g-1 dry weight was measured after 49 days of dry-down. The negative correlation between fructan and sucrose content, which indicates an inter-conversion dependent on tissue water content, suggests that, in this specises, fructans serve as a carbohydrate storage pool, while sucrose stabilises the meristem during extreme water deficit.
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Evaluation of physiological traits and identification of QTLs for drought tolerance in hexaploid wheat (Triticum aestivum L.).Izanloo, Ali January 2008 (has links)
This study comprised three major parts: a comparative physiological study of drought responses under controlled conditions; a genetic study to construct the skeleton map of a doubled haploid (DH) population; and a quantitative trait loci (QTL) analysis to identify QTLs associated with drought tolerance traits in the field. In the first part (Chapter 3), three cultivars of wheat (Triticum aestivum L.) adapted to South Australian conditions were tested for drought tolerance under cyclic drought in growth rooms and glasshouse. Extensive physiological traits, including stomatal conductance, chlorophyll content and fluorescence, ABA content, water status traits (e.g. osmotic adjustment, RWC and leaf water potential), water soluble carbohydrates (WSC) and carbon isotope discrimination (Δ¹ ³C) were measured during experiments. Through these experiments, the drought responses of the three cultivars were physiologically dissected and the likely processes contributing most to drought tolerance were identified. In the South Australian wheatbelt, cyclic drought is a frequent event, represented by intermittent periods of rainfall which can occur around anthesis and post-anthesis in wheat. Three South Australian bread wheat cultivars, Excalibur, Kukri and RAC875, were evaluated in two growth room experiments under cyclic water-limiting conditions. In the first experiment, where plants were subjected to severe water stress, RAC875 and Excalibur (drought tolerant) showed significantly (P < 0.05) higher grain yield under cyclic water availability compared to Kukri (drought susceptible), producing 44% and 18% more grain yield compared to Kukri, respectively. In the second growth room experiment, where plants were subjected to a milder drought stress, the differences between cultivars were less pronounced, with only RAC875 showing significantly higher grain yield under the cyclic water treatment. Grain number per spike and the percentage of aborted tillers were the major yield components that affected yield under cyclic water stress. Excalibur and RAC875 adopted different morpho-physiological traits and mechanisms to reduce water stress. Excalibur was most responsive to cyclic water availability and showed the highest level of osmotic adjustment (OA), highest stomatal conductance, lowest ABA content and most rapid recovery from stress under cyclic water stress. RAC875 was more ‘conservative’ in its responses, with moderate OA, high leaf waxiness, high chlorophyll content and slower recovery from stress. Within this germplasm, the capacity for osmotic adjustment was the main physiological attribute associated with tolerance under cyclic water stress, which enabled plants to recover from water deficit. In the second part (Chapter 4), the genetic linkage map of a DH population including 368 lines, which was developed from a cross between ‘RAC875’ and ‘Kukri’, was constructed. The genetic linkage map consisted of about 500 molecular markers including ~300 DArT (Diversity array technology) and ~200 SSR (Microsattelite markers). In the third part (Chapter 5), Quantitative Trait Loci (QTLs) linked to plant phenology and production traits under irrigated and drought stress conditions were mapped by means of a DH population. To phenotype the population, 368 DH lines were cultivated in two replicates in five environments (three sites across South Australian wheatbelt in collaboration with Australian Grain Technology (AGT) in 2006, and two trials in Mexico in collaboration with CYMMIT, 2007). Data of grain yield, yield components, maturity related traits and some morpho-physiological traits such as leaf chlorophyll content, leaf waxiness, plant height, peduncle length, flag leaf and spike length were measured. Raw data were then analysed for spatial variation for each single trial using the REML procedure in GenStat (version 6). The DH lines showed significant variation for plant phenology, grain yield and yield components under irrigated and drought stress conditions. QTL analyses were performed using QTLCartographer and QTLNetwork for each trait in each site. Two major QTL for maturity traits were identified on chromosomes 2BS and 2DS corresponding to Ppd-B1 and Ppd-D1, respectively. A region was identified on chromosome 7A that harbored major QTL for grain yield, number of grains per square meter, number of grain per spike and spike fertility under drought stress. For yield data in the irrigated trial, two major QTL were identified on chromosome 3B which were not detected in drought stress environments. By using different datasets in the QTL analysis (splitting the population into two subpopulation based on heading time and also adjusting the phenotypic data for heading time to eliminate heading time effect), a QTL for grain yield was consistently detected on chromosome 7A in drought-affected environments. The coincidence of a drought response index QTL on this chromosome indicated that it might be a QTL for yield response under drought. This study demonstrated that the region on the long arm of chromosome 7A identified for grain yield and yield components is a drought response QTL which is closely linked to, but separate from, a heading time QTL. This QTL cluster on chromosome 7A could be used as a good target for positional cloning and gene isolation. However further work would be required to confirm and validate the identified QTLs in this preliminary QTL analysis. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1340056 / Thesis (Ph.D.) -- University of Adelaide, School of Agriculture, Food and Wine, 2008
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Responses of chickpea (Cicer arietinum L.) to zinc supply and water deficits / by Habib Ur Rahman Khan.Khan, Habib Ur Rahman January 1998 (has links)
Bibliography: leaves 201-228. / xvii, 228 leaves : ill. ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / Widespread deficiencies of mineral nutrients in soils along with limited moisture supply are considered major environmental stresses leading to yield losses in chickpea. This study was conducted to determine the zinc requirement of chickpea and the effect on plant water relations. Critical zinc concentration was estimated. It was found that high and low moisture regimes had no effect on critical zinc concentration and that the value remained almost the same in all chickpea genotypes. Sensitivity of 28 chickpea genotypes were evaluated at two zinc levels. Field studies on zinc fertilization in both Australia and Pakistan showed that the application of zinc increased grain yield in all chickpea genotypes. It was found that plants grown under zinc deficiency could not exploit available soil moisture and water use and water use efficiency was reduced, and concluded that high zinc availability may enhance the ability of plants to endure periods of drought by promoting osmotic adjustment. / Thesis (Ph.D.)--University of Adelaide, Dept. of Plant Science, 1999
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