The objective of this study was to determine the leaf water relations, gas exchange, and growth of the bedding plant salvia Salvia splendens 'Bonfire‘ as influenced by moisture stress conditioning (MSC - exposing plants to 4 sublethal dry-down cycles) and potassium (K) nutrition. Plants were fertilized with one of six K rates: 25, 75, 150, 300, 450, and 600 ppm as KCl in experiment one. Seven weeks after seeding plants were subjected to MSC. MSC and increasing K rate resulted in osmotic adjustment and increased cellular turgor potentials. Foliar K content increased as osmotic potentials decreased due to treatment. Although there was no interaction, MSC and high K rates both reduced transpiration (E), leaf conductance (g₁), and daily gravimetric water loss during well watered conditions. Greatest shoot dry weight occurred for plants grown with 300 ppm K and no-MSC. Gas exchange of salvia as influenced by MSC during the onset of moisture stress was determined in experiment two. On day one following final irrigation, MSC plants had lower mid-day E, g₁, hourly gravimetric water loss per unit leaf area, and net photosynthesis (Pn) compared to controls, despite no differences in leaf water potential (ψ₁). Percentage of stomatal inhibition of Pn (SI) was greater for MSC plants than controls with no differences in mesophyllic resistance to CO₂ (r_m). On day two, MSC plants had greater Pn, E, g₁, and hourly gravimetric water loss per unit leaf area, while SI and r_m were lower than controls. MSC plants maintained positive Pn rates and turgor to lower ψ₁ than control plants. Water use efficiency (WUE) estimates for MSC plants were greater than for controls. Salvia plants were fertilized with 75, 300, or 600 ppm K to determine the influence of K rate on gas exchange during the onset of moisture stress in a third experiment. On day one following final irrigation, plants grown with K rates of 300 and 600 ppm had lower E, g₁, hourly gravimetric water loss per unit leaf area, and Pn compared to 75 ppm K plants. On day two, 600 ppm K plants had greater Pn, E, and g₁ as the experiment was terminated compared to plants grown with 75 ppm K, although ψ₁ was similar. Potassium rate had little affect on WUE. / Ph. D.

Thesis (MSCMedSc (Biomedical Sciences. Medical Physiology))--University of Stellenbosch, 2005. / Stress is considered one of the major factors involved in the pathogenesis of affective disorders, for example, direct and indirect exposure to terrorist attacks or being subjected to subtle victimization. There is a long history of development of procedures to determine anxiety responses in animals in order to find new or better treatments for patients. Prior stress exposure is known to alter the activation response to a subsequent stressor and the means of coping with stress can influence health and disease. This orchestrated process, usually referred to as the “stress response”, involves various mechanisms, which allow the body to make the necessary physical, psychological and the neuro-endocrine adjustments required to cope with the demands of a homeostatic challenge. The communication box method is a useful model to investigate the physiological changes that occur under psychological stress, since it can produce an experimental anxiety based on psychological communication between two or more animals, without the direct physical stress. In this animal model, the psychologically stressed rats are exposed to the visual, olfactory, auditory stimuli (such as struggling, vocalization, defecating, urinating and jumping) from the foot shock rat (Oishi et al., 2003). In the present study, we examined the neuro-endocrine and behavioural responses after different durations of inescapable foot shock and the subsequent effect of citalopram (10 milligram/kilogram, intraperitoneal once a day for 10 days), a selective serotonin reuptake inhibitor in reversing these responses. We have subjected rats to a number of stress paradigms (varying in duration), and assessed the effects thereof on behaviour at two different time points. Physically stressed rats were subjected to 10 unpredicted electric foot shocks (0.5 milliampere), in 10 minutes, while the psychologically stressed rats witnessed everything. The behavioural responses were assessed 5 days and 10 days after the last stress session. The rats were decapitated and corticosterone concentrations were determined one day after the open field and elevated plus-maze tests were performed. The behavioural and endocrine responses in the rats subjected to physical and psychological stress in this study showed that single stress exposure may lead to different outcomes as repetitive stress exposure and that the consequences of stress exposure develop over time and persist for an extended time period. These consequences of direct stress exposure versus indirect stress exposure show a grading in stress intensity and perception, similar to that observed in humans. In the experiment where the rats where treated with citalopram, it showed that citalopram is effective in reversing anxious-like behaviours, but not locomotor deficits. In all the animals basal plasma corticosterone concentrations were comparable and physically and psychologically stressed rats displayed a hyposensitive hypothalamic-pituitary-adrenal axis following acute restraint stress. These findings are interesting in a number of ways. It showed that our stress models propose to be useful in elucidating the complex interrelationship between an external event or stressor, and the organism experiencing it. Simultaneously it presents a promising platform for the finding of new or better treatments for patients.

Cowpea (Vigna unguiculata L.) is an important legume, especially in the hot, dry tropics and subtropics of sub-Saharan Africa. It has been widely reported to be drought tolerant. Cowpea is a highly nutritious, multi-purpose crop, used as a leafy vegetable and grain legume with potential to contribute to food security in marginal areas. However, the crop is still classified as a neglected underutilised species; legume research focus has been mainly devoted to established legumes such as common bean and soybeans. There is a need to collect empirical information on cowpea which could be used to advise farmers on management strategies. This study evaluated cowpea responses to water stress under controlled and field conditions. Initially, two cowpea varieties (Brown and White birch) were evaluated for seed quality using the standard germination that was laid out in a completely randomised design and each variety was replicated for times. Electrolyte conductivity test was also performed under laboratory conditions. Thereafter, a pot trial was conducted to evaluate cowpea response to water stress imposed at different growth stages under varying growth temperatures. The pot trial comprised three factors: temperature [High (33/27ºC), Optimum (27/21ºC) and Low (21/15ºC)], water regimes (no stress, terminal stress, intermittent stress – vegetative and intermittent stress - flowering) and cowpea varieties. Lastly, a field trial was conducted to evaluate cowpea production as well as the effect of sequential leaf harvesting on yield under irrigated and rainfed conditions. The field trial was laid out as a split-plot design, with water regime (irrigation vs. rainfed) as main factors, cowpea varieties as sub-factor and sequential harvesting (no harvest, harvested once and harvested twice), replicated three times. All treatments were arranged in a randomised complete block design. Results of the initial study showed that germination capacity and vigour of cowpea varieties were significantly different (P < 0.001). White birch had higher electrolyte leakage than Brown birch. Pot trial results showed that cowpea growth (leaf area, leaf number and plant height) was vigorous in the high temperature regime compared with optimum and low temperature regimes. Chlorophyll content index was higher under high temperature relative to optimum and low temperature regimes, respectively. Under low and optimum temperature regimes, cowpea growth was stunted; cowpea failed to flower and form yield. Whereas, under high temperature regime, cowpea growth was vigorous hence flowered and formed yield. Vegetative growth was more sensitive to water stress than flowering stage. Terminal stress and stress imposed during flowering resulted in increased proline accumulation relative to no stress and stress imposed during vegetative growth. Harvest index was lower when water stress was imposed during vegetative relative to flowering stage. Field trial results showed that cowpea growth was sensitive to water stress. Plant height, leaf number, chlorophyll content index and stomatal conductance were lower under rainfed relative to irrigated conditions. Sequential harvesting of leaves had no significant effect on cowpea yield. It is concluded that tropical temperature conditions are most suitable for cowpea production; the controlled environment study showed best crop performance under 33/27ºC. In the context of varieties used for the present study, vegetative growth was the most sensitive stage to water stress. Cowpea performed better under rainfed relative to irrigated conditions with respect to yield formation. Low temperature was found to be more limiting to cowpea growth, development and productivity compared with water stress. Whereas, under high temperature conditions, water stress was more limiting to plant growth and productivity. White birch may be used as a dual purpose crop due to its ability to produce reasonable grain yield regardless of defoliation. / Thesis (M.Sc.Agric)-University of KwaZulu-Natal, Pietermaritzburg, 2012.

In order to complete their life cycles, vertebrates require oxygen and water. However, environments are not always forgiving when it comes to constantly providing these basic needs for vertebrate life. The annual killifish Austrofundulus limnaeus is possibly the most well described extremophile vertebrate and its embryos have been shown to tolerate extremes in oxygen, salinity, and water availability. This phenotype is likely a result of the annual killifish life history, which includes periods of temporary habitat desiccation and oxygen deprivation, and requires the production of stress-tolerant embryos that depress metabolism in a state of suspended animation, known as diapause. Over the past several decades, the basic morphology and physiology of annual killifish development has become better characterized. However, there are still basic cellular processes that remain to be described in annual killifish such as A. limnaeus. Specifically, changes in DNA structure, expression, and copy number are known to have profound impacts on the phenotype and survival of an organism. Little is known as to how A. limnaeus maintains genome integrity during cell stress, nor how the A. limnaeus nuclear and mitochondrial genomes may have evolved under the unpredictable conditions in which A. limnaeus thrive. Early annual killifish embryonic development is also characterized by a complete dispersion and subsequent reaggregation of embryonic blastomeres prior to formation of the embryonic axis. This unusual period of early development may provide a functional adaptation that allows annual killifish embryos to survive these extreme conditions. The overall goals of this project were to (1) characterize the ability of A. limnaeus to tolerate and repair DNA damage through enzymatic and developmental mechanisms, (2) to determine possible consequences of mitochondrial DNA sequence and copy number on the metabolism of A. limnaeus, and (3) to establish a draft genome of A. limnaeus for future comparative genome studies. The results of this project show that embryos of A. limnaeus have an impressive ability to survive and reverse high doses of DNA damage induced by ultraviolet-C (UV-C) radiation, especially when allowed to recover under photoreactivating light. Surprisingly, embryos that survived irradiation during blastomere dispersion phases were able to develop normally. Characterization of gene expression during embryonic development for genes important for axis formation and cellular differentiation suggests that A. limnaeus embryos may delay axis formation until several days after epiboly is complete, thus allowing time for cells that become damaged to be replaced by surrounding pluripotent cells. This outcome would represent first case of a developmental buffering stage in a vertebrate. A. limnaeus embryos are also unique in their mitochondrial response to anoxia. Whereas in other species the amount of mitochondrial DNA (mtDNA) copy number fluctuates following extremes in oxygen availability, A. limnaeus embryonic mtDNA remains stable. Additionally, characterization of the fully sequenced A. limnaeus mitochondrial genome reveals possible evolutionary adaptations that may have facilitated dormancy and anoxia tolerance when compared to other species within the Order Cyprinodontiformes. The final chapter of this project characterizes the draft genome of A. limnaeus and I provide evidence suggesting that epigenetic DNA methylation that may be involved in regulating diapause.

A dissertation submitted in fulfilment of the requirements for the degree Master of Science in Engineering, in the Faculty of Engineering and the Built Environment, University of the Witwatersrand, Johannesburg. January 2017 Johannesburg / It is well known that emotional stress has a negative impact on people’s health and physical, emotional and mental performance. Previous research has investigated the effects of stress on various aspects of physiology such as respiration, heart rate, heart rate variability (HRV), skin conductance, skin temperature and electrical activity in the brain. Essentially, HRV, Electroencephalography (EEG), skin conductance and skin temperature appear to reflect a stress response or state of arousal. Whilst the relationship between respiration rate, respiration rhythm and HRV is well documented, less is known about the relationship between respiration rate, EEG, skin conductance and skin temperature, whilst HRV is maximum (when there is resonance between HRV and respiration i.e. in phase with one another). This research project aims to investigate the impact that one session of slow paced breathing has on EEG, heart rate variability (HRV), skin conductance and skin temperature. Twenty male participants were randomly assigned to either a control or intervention group. Physiological data were recorded for the intervention and control group during one breathing session, over a short initial baseline (B1), a main session of 12 minutes, and a final baseline (B2). The only difference between the control and intervention groups was that during the main session, the intervention group practiced slow paced breathing (at 6 breaths per minute), while the control group breathed spontaneously. Wavelet transformation was used to analyse EEG data while Fourier transformation was used to analyse HRV. The study shows that slow-paced breathing significantly increases the low frequency and total power of the HRV but does not change the high frequency power of HRV. Furthermore, skin temperature significantly increased for the control group from B1 to Main, and was significantly higher for the control group when compared to the intervention group during the main session. There were no significant skin temperature changes between sessions for the intervention group. Skin conductance increased significantly from Main to B2 for the control group. No significant changes were found between sessions for the intervention group and between groups. EEG theta power at Cz decreased significantly from Main to B2 for the control group only, while theta power decreased at F4 from Main to B2 for both groups. Lastly, beta power at Cz decreased from B1 to B2 for the control group only. This significant effect that slow-paced breathing has on HRV suggests the hypothesis that with frequent practice, basal HRV would increase, and with it, potential benefits such as a reduction in anxiety and improved performance in specific tasks. Slow-paced breathing biofeedback thus shows promise as a simple, cheap, measurable and effective method to reduce the impact of stress on some physiological signals, suggesting a direction for future research. / MT2017

Thesis (Ph. D.)--Joint Program in Oceanography/Applied Ocean Science and Engineering (Massachusetts Institute of Technology, Dept. of Mechanical Engineering; and the Woods Hole Oceanographic Institution), 2011. / "June 2011." Cataloged from PDF version of thesis. / Includes bibliographical references (p. 253-293). / Sampling the vast volumes of the ocean requires tools capable of observing from a distance while retaining detail necessary for biology and ecology, ideal for optical methods. Algorithms that work with existing SeaBED AUV imagery are developed, including habitat classification with bag-of-words models and multi-stage boosting for rock sh detection. Methods for extracting images of sh from videos of long-line operations are demonstrated. A prototype digital holographic imaging device is designed and tested for quantitative in situ microscale imaging. Theory to support the device is developed, including particle noise and the effects of motion. A Wigner-domain model provides optimal settings and optical limits for spherical and planar holographic references. Algorithms to extract the information from real-world digital holograms are created. Focus metrics are discussed, including a novel focus detector using local Zernike moments. Two methods for estimating lateral positions of objects in holograms without reconstruction are presented by extending a summation kernel to spherical references and using a local frequency signature from a Riesz transform. A new metric for quickly estimating object depths without reconstruction is proposed and tested. An example application, quantifying oil droplet size distributions in an underwater plume, demonstrates the efficacy of the prototype and algorithms. / by Nicholas C. Loomis. / Ph.D.

Thesis submitted to the Division of Science and Engineering. Bibliography: leaves 219-235.

Growth rates between individually tagged Atlantic halibut, from a single batch of farm produced eggs, on-grown in sea cages and pump ashore tanks for three years were significantly different. The tank reared fish 405g - 5992g showed a 29% premium in growth (final weight) compared to the cage reared fish 444g -4640g. Females in both systems reached a greater size (7352g tanks, 5836g cages) than males. Males that matured early (3819g tanks, 2877g cages) had a lower mean end weight than males maturing a year later (4326g tanks, 3086g cages). Early maturing males had the largest initial size. Seasonal variations in growth were observed for all groups. Major divergences in growth between males and females only became apparent when the males first matured at around 1.5 - 2 kg. No female maturation was observed during the trial. Halibut growth was determined to be positively allometric with growth of males being more linear then females. Condition factor increased with time whilst there was a decrease in Specific Growth Rate (SGR) from approximately 0.5%day⁻¹ to 0.1%day⁻¹ throughout the trial. Concentrations of plasma cortisol, osmolality, chloride and glucose measured through the trial provided no evidence of chronic stress at either site. Acute confinement stress (2, 12 and 30 minutes) was shown to elicit both primary and secondary stress responses in accordance with other marine teleosts. Increases in plasma cortisol, osmolality, CI⁻, Na⁺ and glucose were observed, reaching maximum concentrations within 80 minutes, although there was no effect on plasma K⁺. The duration of the confinement appeared to have no effect on the magnitude of the response. Following repeat confinements (4 days later) there was no evidence of either habituation or a cumulative effect in terms of cortisol or glucose whereas the effects on osmoregulatory function (Na⁺, CI⁻ and osmolality) appeared to be longer lasting. The results provided the first information regarding the stress response of the Atlantic halibut and enabled a better interpretation of the vales measured in the fish reared in tanks and cages (chapter 1). In vitro cortisol production (% above basal secretion), measured by radioimmunoassay, from perifused interrenal tissue of the Atlantic halibut was significantly stimulated by porcine adrenocorticotrophic hormone (ACTH) (0.01-1.0 μM) and [Asn¹, Val⁵] angiotensin II (All) (0.1-lO μm). No significant increase in cortisol production resulted from physiological levels of potassium (K⁺) although non-physiological levels (lOmMKl) did elicit a mild response in comparison to the effects of ACTH and All. Maximum steroid production was in response to 0.01μM ACTH (1351% above basal secretion) and 1.0μM All (397% above basal secretion). With increased concentrations above these levels of both ACTH and All there was a reduction in the degree of cortisol stimulation. The results show that the interrenal tissue of the Atlantic halibut responds in accordance to that of other teleosts to classical steroidogenic peptides.

Maize (Zea mays L.) is an important crop in the world; however, its yield is compromised by new production challenges leading to poor yield in sub-Saharan Africa. This calls for a need to enhance maize adaptation to changing climate and challenging environments. The new maize varieties should be richly endowed with high frequency of genes that confer high yield under stress and non-stress conditions. Currently, such maize is not available, prompting research into development of new germplasm lines for use in developing new hybrids. The objective of the study was to determine i) the level of genetic diversity using SSR molecular markers and phenotypic data in a set of 60 maize inbreds from the breeding program, ii) genotype by environment interaction in maize hybrids, iii) cultivar superiority, iv) combining ability effects, v) the relationship between yield and secondary traits and vi) the relevant genetic parameters that underpin genetic gains in a breeding program. To study genetic diversity present in the germplasm, phenotypic data and 30 SSR markers were used to estimate the genetic distance between the inbreds. The results indicated that inbred lines which were put in the same cluster were related by pedigree and origin. To assess the level of genotype by environment interaction (GXE) and cultivar superiority of the new germplasm lines, hybrids were planted in five environments with two replications. Data were analysed using the REML and AMMI tools in GenStat 14th edition. The results revealed significant differences between hybrids and environments for grain yield. However, GXE interaction was also significant indicating possible challenges which can be encountered in selecting new hybrids. To determine combining ability estimates two different testers were used. The REML tool from GENSTAT was used to perform the line X tester analysis. Results indicated that both additive and non-additive gene action were important for grain yield. The direct selection strategy for yield was recommended because heritability of grain yield was high. Overall, results suggested that the information on genetic diversity will assist in defining heterotic groups; which will enable effective and efficient management of the germplasm lines to produce new maize hybrids. / Thesis (M.Sc.)-University of KwaZulu-Natal, Pietermaritzburg, 2012.

This study investigated the possibility of using ground-based remotely sensed hyperspectral observations with a special emphasis on detection of water, weed and nitrogen stresses contributing towards in-season decision support for precision crop management (PCM). / A three factor split-split-plot experiment, with four randomized blocks as replicates, was established during the growing seasons of 2003 and 2004. Corn (Zea mays L.) hybrid DKC42-22 was grown because this hybrid is a good performer on light soils in Quebec. There were twelve 12 x 12m plots in a block (one replication per treatment per block) and the total number of plots was 48. Water stress was the main factor in the experiment. A drip irrigation system was laid out and each block was split into irrigated and non-irrigated halves. The second main factor of the experiment was weeds with two levels i.e. full weed control and no weed control. Weed treatments were assigned randomly by further splitting the irrigated and non-irrigated sub-blocks into two halves. Each of the weed treatments was furthermore split into three equal sub-sub-plots for nitrogen treatments (third factor of the experiment). Nitrogen was applied at three levels i.e. 50, 150 and 250 kg N ha-1 (Quebec norm is between 120-160 kg N ha-1). / The hyperspectral data were recorded (spectral resolution = 1 nm) mid-day (between 1000 and 1400 hours) with a FieldSpec FR spectroradiometer over a spectral range of 400-2500 run at three growth stages namely: early growth, tasseling and full maturity, in each of the growing season. / There are two major original contributions in this thesis: First is the development of a hyperspectral data analysis procedure for separating visible (400-700 nm), near-infrared (700-1300 nm) and mid-infrared (1300-2500 nm) regions of the spectrum for use in discriminant analysis procedure. In addition, of all the spectral band-widths analyzed, seven waveband-aggregates were identified using STEPDISC procedure, which were the most effective for classifying combined water, weed, and nitrogen stress. The second contribution is the successful classification of hyperspectral observations acquired over an agricultural field, using three innovative artificial intelligence approaches; support vector machines (SVM), genetic algorithms (GA) and decision tree (DT) algorithms. These AI approaches were used to evaluate a combined effect of water, weed and nitrogen stresses in corn and of all the three AI approaches used, SVM produced the best results (overall accuracy ranging from 88% to 100%). / The general conclusion is that the conventional statistical and artificial intelligence techniques used in this study are all useful for quickly mapping combined affects of irrigation, weed and nitrogen stresses (with overall accuracies ranging from 76% to 100%). These approaches have strong potential and are of great benefit to those investigating the in-season impact of irrigation, weed and nitrogen management for corn crop production and other environment related challenges.