Zugl.: Berlin, Humboldt-University, Diss., 2009.

Thesis (doctoral)--Swedish University of Agricultural Sciences, 2000. / Includes bibliographical references.

Abiotic stresses such as salt stress are the major limiting factors for agricultural productivity, and cause global food insecurity. It is well known that plant associated beneficial microorganisms can stimulate plant growth and enhance resistance to abiotic stresses. In this context, bacterial endophytes are a group of bacteria that colonize the host plant and play a fundamental role in plant growth enhancement under stress condition. Recently, our group reported that the beneficial bacteria Enterobacter sp.SA187 induces plant growth in Arabidopsis under salt stress conditions by manipulation of the plant ethylene signaling pathway. We therefore compared inoculation of plants by SA187 with virulent and non-virulent strains Pst DC3000. Although both strains inhibit plant growth at ambient conditions, Pst DC3000 hrcC-, but not Pst DC3000, induced salt stress tolerance, suggesting that Pst DC3000 hrcC- also contains plant growth promoting activity under stress conditions. Our results indicate that Pst DC3000 hrcC- shares features with beneficial bacteria by inducing salt tolerance through reduction of the shoot and root Na+/K+ ratio. To further elucidate the underlying mechanisms of this interaction with Arabidopsis, RNAseq, hormone and biochemical analyses were performed. Genetic studies also show that Pst DC3000 hrcC- induced salt stress tolerance involving several phytohormone pathways, including auxin, ethylene and salicylic acid. Transcriptome and genetic analyses indicate that glucosinolates play an important role in this beneficial interaction. We found that indolic and alkyl glucosinolates act as negative factors on Pst DC3000 hrcC-, alkyl glucosinolates are positive and indolic glucosinolates negative regulators in SA187 interaction with Arabidopsis. These results reveal that besides a repertoire of effectors, Pst DC3000 hrcC- also produces factors that can be beneficial for plant growth under certain stress conditions, as observed with Enterobacter sp. SA187.

京都大学 / 0048 / 新制・課程博士 / 博士(農学) / 甲第22494号 / 農博第2398号 / 新制||農||1076(附属図書館) / 学位論文||R2||N5274(農学部図書室) / 京都大学大学院農学研究科応用生命科学専攻 / (主査)教授 小川 順, 教授 栗原 達夫, 教授 加納 健司 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DFAM

The cabbage seedpod weevil, Ceutorhynchus obstrictus (Marsham) (Coleoptera: Curculionidae), is an important pest of brassicaceous oilseed crops, especially canola (Brassica napus L. and Brassica rapa L.) in North America and Europe. Application of foliar insecticide is the only method currently employed to control C. obstrictus populations; because this approach is environmentally unsustainable, alternatives including host plant resistance have been explored. White mustard, Sinapis alba L., is resistant to C. obstrictus and was chosen as a potential source of resistance for B. napus oilseed. Interspecific crosses of S. alba x B. napus have produced several lines that are resistant to C. obstrictus feeding and oviposition and yield fewer, lighter-weight weevil larvae that take longer to develop. I investigated potential mechanisms of this resistance, including assessing differences in visual and olfactory cues among resistant and susceptible genotypes, and antixenosis and antibiosis. Determining effects of visual cues associated with host plant resistance required investigation of weevil vision. Deployment strategies for resistant germplasm were assessed to evaluate incorporation of susceptible refugia to promote long-term durability of resistance traits. Results reported in Chapter 2 indicate that the C. obstrictus visual system is apparently trichromatic and incorporates receptors with response maxima near 350, 450, and 550 nm. Modelling indicated that UV light alone reduced weevil responses but the interaction of yellow and UV light increased responses at a threshold reflectance level of UV. Results reported in Chapter 3 indicated that differences in yellow and UV reflectance among host plant flowers influence host selection in C. obstrictus. Results described in Chapter 4 determine differential attraction to the odours of S. alba and B. napus and among resistant and susceptible accessions. Inferences of the identities of glucosinolates found in varying amounts among susceptible and resistant genotypes suggested that 2-phenylethyl glucosinolate influenced attractiveness. Results described in Chapter 5 indicate differences in adult feeding and oviposition preferences among resistant and susceptible genotypes. Oocyte development, larval biomass and larval development time varied among weevils feeding on resistant and susceptible genotypes. Based on results of Chapter 4, 1-methoxy-3-indolylmethyl glucosinolate was implicated as contributing to antixenosis and antibiosis resistance. Results reported in Chapter 6 describe effects of mixed plots of resistant and susceptible genotypes on weevil spatial distribution and oviposition. These results are consistent with associational resistance and attributed to reduced apparency of susceptible plants in mixtures and antixenosis resistance associated with resistant germplasm. / Plant Science

No description available.

Canola/rapeseed (Brassica napus L.) is a major oilseed crop worldwide. However, its production is largely affected by the fungal disease Sclerotinia stem rot as well as seed glucosinolates. So far the genetic mechanisms controlling these two traits have been poorly understood. In the present study, three bi-parental doubled haploid B. napus populations M730, M692 and ZT were grown in either natural or artificial environments and genotyped using the Brassica 60K Infinium® SNPs and/or sequence related amplified polymorphisms. Three genetic linkage maps covered 2,597.7 cM, 2,474.1 cM and 1,731.6 cM in 19 chromosomes for M730, M692 and ZT, respectively. Plants were inoculated with Sclerotinia sclerotiorum mycelia on stems at the reproductive stage to evaluate their resistivity. Four aliphatic glucosinolates and one indolic glucosinolate were detected in the seeds using high-performance liquid chromatography. 4-hydroxy-3-indolylmethyl predominated over aliphatic glucosinolates in canola, but inversely constituted a small portion of total glucosinolate content in semi-winter rapeseed. In rapeseed, 2-hydroxy-3-butenyl predominated in 4C aliphatic glucosinolates, which in turn predominated in total aliphatic glucosinolates, which likewise predominated in total glucosinolate content. QTLs regulating major glucosinolates were located on chromosome A9 for high glucosinolate content populations M730 and ZT, and on chromosome C7 for low glucosinolate content population M692. Major QTLs for Sclerotinia stem rot resistance were located on chromosomes A7 and C6 in M730, on chromosomes A3 and A7 in ZT, while no major QTLs were found in M692. Additive genetic effect was the major factor explaining phenotypic variations of the two traits. No direct genetic relationship was observed between Sclerotinia stem rot resistance in adult plants and seed glucosinolates in B. napus. The findings in the studies could be used to formulate breeding and research strategies in B. napus and the major QTLs controlling the two traits and their closely linked SNP markers could be validated over wide germplasm and used in marker assisted selection. / October 2016

Im Rahmen dieser Disseration wurden im Einzelnen folgende Ergebnisse erzielt: A. Isolierung und Strukturaufklärung von Naphthylisochinolin-Alkaloiden aus verschiedenen Ancistrocladus-Spezies: • Die bisher noch nicht phytochemisch untersuchten Rindenextrakte der vietnamesischen Unterart Ancistrocladus tectorius ssp. cochinchinensis wurden im Hinblick auf ihre Sekundärmetabolite analysiert. Dabei identifizierte man vier bereits bekannte und drei neuartige Naphthylisochinoline-Alkaloide. Die Strukturen dieser drei Metabolite wurden nach Isolierung unter Verwendung diverser 2D-NMR-Techniken aufgeklärt. Die entdeckten Substanzen – Ancistrocladinium A (30) und seine beiden O-Demethylderivate 31 und 32 – waren die drei ersten Vertreter des neuartigen N,8'-Naphthyldihydroisochinolin-Kupplungstyps. Diese Naturstoffe verfügen über vielversprechende pharmakologische Wirkungen – vor allem gegen den Erreger der Leishmaniose. • Die botanisch noch nicht vollständig charakterisierte Lianenart ''A. ikela'', die aus der Demokratischen Republik Kongo stammt, wurde im Laufe der Arbeit morphologisch und phytochemisch untersucht und beschrieben. Neben den beiden N,C-verknüpften Naphthylisochinolinen Ancistrocladinium A (30) und Ancistrocladinium B [(M/P)-39] wurde bei der phytochemischen Analyse ein neuartiges C,C-gekuppeltes Alkaloid – 8-O-Methylancistrogriffin C (40) – isoliert. Des weiteren wurde ein Gradient entwickelt, der die vollständige Trennung der beiden Atrop-Diastereomere von 39 und dadurch HPLC-NMR- und HPLC-CD-Analysen der einzelen Epimere ermöglichte, so dass die Rotationsbarriere der bei Raumtemperatur langsam drehenden Biarylachse bestimmt werden konnte. • Aus Blättern der bereits gut untersuchten indischen Ancistrocladus-Art A. heyneanus wurde mit 6-O-Methyl-8,4'-O-didemethylancistrocladin (42) ein weiteres neues Naphthylisochinolin-Alkaloid isoliert. • Eine phytochemische Untersuchung der Familie der Ancistrocladaceae auf das Vorkommen von N,C-verküpften Naphtylisochinolinen ergab, dass diese strukturell außergewöhnlichen Alkaloide in diesen Lianen weit verbreitet sind. B: Die Rolle des Phloems bei der Pathogen-vermittelten Ausbreitung von Signalen: • Im Rahmen des Teilprojektes B8 des SFBs 567 wurden Untersuchungen zur Rolle des Phloems bei der Weiterleitung von Langstreckensignalen nach Infektion von Arabidopsis-thaliana-Pflanzen mit virulenten oder avirulenten Stämmen von Pseudomonas syringae pv. tomato durchgeführt. Zunächst wurde dazu eine im nL-Maßstab anwendbare Analysenmethode für die Hauptmetabolite von A. thaliana – die Glucosinolate – entwickelt. Mit Hilfe dieser empfindlichen Methode wurden in Pflanzenextrakten von A. thaliana viele bekannte und einige neue Glucosinolate (8-Methylsulfonyl-n-octyl-, 2-Hydroxy-4-methylsulfinyl-n-butyl-, 2-Hydroxy-4-methylsulfonyl-n-butyl- und 4-Hydroxy- benzoyloxymethylglucosinolat) identifiziert. Des weiteren wurden MS/MS-Analysen der Glucosinolate durchgeführt, bei denen neben mehreren typischen Fragmenten für die Thiozucker-Einheit auch einige charakteristische Fragmente für die unterschiedlichen Seitenketten (z.B. Methylsulfinyl-n-alkyl- oder Methylthio-n-alkyl-Struktur) detektiert wurden. Leider ergaben vor allem die aromatischen und heteroaromatischen Seitenketten-Typen kein typisches Fragmentierungs-muster. • Bei der Analyse der Phloemexsudate konnte in Phloemsäften von unbehandelten Pflanzen neben Methoxyglucobrassicin (73) ein für Pflanzen neuartiges Phosphat 87 (1-Glycero-1-myo-inositolphosphat) identifiziert werden. In den Phloemsäften der unterschiedlich behandelten Pflanzen (infiltriert mit MgCl2, einem virulentem oder einem avirulentem Pseudomonas-Stamm) kamen sämtliche Hauptmetabolite der Blätter vor. Lediglich ein leichter, nicht signifikanter Konzentrationsanstieg von Methoxyglucobrassicin (73) wurde im Phloemsaft von mit avirulenten Pathogenen infizierten Pflanzen festgestellt. Dieser Anstieg muss aber kritisch betrachtet werden, da er auch ein Artefakt des starken mechanischen Reizes des Infiltrationsprozesses sein könnte. Andere kleine Konzentrationsänderungen könnten außerdem durch das starke ''Grundrauschen'' der Infiltration überlagert werden. C: Strukturaufklärung polyketidischer Sekundärmetabolite aus Mikroorganismen: • Zwei niedermolekulare Naturstoffe aus dem extremophilen Streptomyceten-Stamm KC 1030, die in der Arbeitsgruppe von Prof. H.-P. Fiedler (Universität Tübingen) isoliert worden waren, wurden strukturell aufgeklärt. Bei dem einen handelt es sich um das bereits bekannte Frigocyclinon (89), bei dem anderen um ein neues Angucyclinon 88 mit Fridamycin-E-Grundkörper. Darüber hinaus wurden aus einem weiteren Streptomyces-Stamm (AK 671) zwei neue (97, 98) und drei (96, 99, 100) bekannte biosynthetisch interessante Sekundärmetabolite isoliert. / In detail, the following results were achieved during this doctoral thesis: A: Isolation and structural elucidation of naphthylisoquinoline alkaloids from Ancistrocladus species: • The not yet phytochemically investigated bark extracts of the Vietnamese subspecies Ancistrocladus tectorius ssp. cochinchinensis were analyzed. Four already known and three unknown naphthylisoquinoline alkaloids were identified. The three new metabolites were isolated and structurally elucidated by the use of different 2D NMR techniques. The defined structures – ancistrocladinium A (30) and its two O-demethyl derivatives 31 and 32 – are the first representatives of the new N,8'-naphthyl dihydroisoquinoline coupling type. These natural products exhibit promising biological activities – above all against the pathogen of leishmaniasis. • The botanically not yet fully characterized liana species ''A. ikela'', which was collected in the Congo Basin (Democratic Republic Congo), was morphologically and phytochemically investigated and described botanically. Besides the two N,C-coupled naphthylisoquinolines, ancistrocladinium A (30) and ancistrocladinium B [(M/P)-39], a new C,C-coupled alkaloid – 8-O-methylancistrogriffine C (40) – was isolated. Furthermore, by establishing a gradient system for the baseline separation of both atropodiastereomers of 39 HPLC-NMR and HPLC-CD analyses of the individual two purified epimers were performed to define the rotational barrier of the biaryl axis, which slowly rotates at room temperature. • From the leaves of the already well-investigated Indian Ancistrocladus species A. heyneanus, 6-O-methyl-8,4'-O-didemethylancistrocladine (42), a hitherto unknown naphthylisoquinoline alkaloid, was isolated. • A phytochemical investigation of the plant family of the Ancistrocladaceae with respect to the occurrence of N,C-coupled naphtylisoquinolines proved that these structurally exceptional alkaloids are quite common in this liana family. B: The role of the phloem during the propagation of pathogen-mediated signals: • Within the scope of the project B8 of the SFB 567, investigations on the role of the phloem during the propagation of long-distance signals after infection of plants of Arabidopsis thaliana with virulental or avirulental strains of Pseudomonas syringae pv. tomato were carried out. For this purpose initially an analytical method for the main metabolites – the glucosinolates – of A. thaliana applicable at a nL-scale was developed. Using this sensitive method, many known but also some new glucosinolates (8-methylsulfonyl-n-octyl-, 2-hydroxy-4-methylsulfinyl-n-butyl-, 2-hydroxy-4-methylsulfonyl-n-butyl-, and 4-hydroxy-benzoyloxymethyl-glucosinolate) were identified in plant extracts of A. thaliana. Furthermore, MS/MS analyses of the glucosinolates were carried out to verify their structures. Next to some typical fragments of the thiosugar moiety a few characteristic fragments of the different side chain structures (e.g. methylsulfinyl-n-alkyl- or methylthio-n-alkyl structure) were detected. Unfortunately, not all of the different types of side chaines led to typical fragmentation pattern. • In the phloem sap of entirely untreated plants, only methoxyglucobrassicin (73) and a phosphate 87 (1-glycero-1-myo-inositolphosphate), which was not kown so far to be located in plants, were identified in the course of the analysis of the phloem exudates. In the phloem saps of all the differently treated plants (infiltrated with MgCl2, virulental or avirulental Pseudomonas strain) all of the main leaf metabolites occurred. Solely a slight but not significant increase of the concentration of methoxyglucobrassicin (73) was measured in the phloem exudates of plants infected with avirulental pathogens. One has to be extremely careful with respect to the observed increase since it is possible that the enhanced glucosinolate concentration was the result of the strong mechanical stimulus of the infiltration procedure. Furthermore, slight changes in the concentration of other metabolites could be superimposed by signals caused by the infiltration procedure. C: Structural elucidation of polyketidic secondary metabolites from microorganisms • The structures of two low-molecular natural products isolated in the working group of Prof. H.-P. Fiedler (University of Tübingen) from the extremophilic Streptomyces strain KC 1030 were elucidated. One of them was the already known frigocyclinone (89) and the other one was the new angucyclinone 88 with a fridamycine E core structure. Moreover, from the Streptomyces strain AK 671, two new (97, 98) and three known (96, 99, 100) biosynthetically interesting secondary metabolites were isolated.

Yellow and oriental mustards deodorized by a laboratory autoclave method have been shown to reduce the number of E. coli O157:H7 greater than the mandatory 5 log CFU/g during sausage manufacture. However, E. coli O157:H7 was inconsistently controlled by different deodorized mustards. The antimicrobial action of mustard results from the conversion of naturally present glucosinolates into inhibitory isothiocyanates by plant myrosinase in untreated hot mustard and by bacterial myrosinase-like activity when present in thermally-treated (deodorized) mustard. Variable results with deodorized mustards suggested that plant myrosinase might not have been completely inactivated during laboratory thermal treatment using the autoclave. Results obtained showed that when a 2 cm thick layer of mustard was used during autoclave treatment, plant myrosinase activity periodically remained. However, the completely deodorized mustard failed to reduce bacterial viability as effectively as yellow mustard containing residual or slight amount of myrosinase. As a result, a small amount of myrosinase activity was highly likely contribute to the overall antimicrobial activity of deodorized mustard against E. coli O157:H7 in dry sausage.

Research objective. The study was aimed to identify the dynamics of accumulation of phenolic compounds and glucosinolates in oilseed rape and the effect of different morphological parts of oilseed rape on agricultural plants and weeds. The goals of the studies. The following goals were set in order to reach the aim of the studies: 1. To identify the dynamics of accumulation of phenolic compounds in oilseed rapeduring vegetation. 2. To analyse composition of allelochemical compounds of different morphological parts of rape residues after harvesting and ascertain quantitative and qualitative changes of these compounds in rape residues that decomposed in the soil for a different period. 3. To ascertain the effect of different morphological parts of oilseed rape that remain immediately after harvesting on the germination, shoot height and root length of agricultural plants and weeds. 4. To ascertain the effect of different morphological parts of oilseed rape that decomposed in the soil for a different period on the germination, growth of shoots and roots of agricultural plants and weeds. / Tyrimų tikslas. Nustatyti fenolinių junginių ir gliukozinolatų kaupimosi rapsuose dinamiką bei rapsų skirtingų morfologinių dalių liekanų poveikį žemės ūkio augalams ir piktžolėms. Tyrimų uždaviniai: 1. Nustatyti fenolinių junginių kaupimosi dinamiką rapsuose vegetacijos metu. 2. Ištirti alelocheminių junginių sudėtį rapsų skirtingų morfologinių dalių liekanose po derliaus nuėmimo ir nustatyti jų kiekybinius ir kokybinius pokyčius skirtingą laiką dirvoje irusiose rapsų liekanose. 3. Nustatyti rapsų atskirų morfologinių dalių, liekančių iškart po derliaus nuėmimo, poveikį žemes ūkio augalų ir piktžolių sėklų dygimui, daigų aukščiui ir šaknų ilgiui. 4. Nustatyti skirtingą laiką dirvoje irusių rapsų morfologinių dalių poveikį žemės ūkio augalų ir piktžolių sėklų dygimui, daigų bei šaknų augimui.