No description available.

A planetary nebula (PN) consists of material, mainly gas, that has been ejected from a star on the asymptotic giant branch of its life cycle. This material emits electromagnetic radiation due to photoionization and recombination, collisional and radiative excitation or free-free radiation. The envelope of material moves outwards from the central star and may take one of a variety of shapes. These shapes are believed to be sculpted by the stellar wind, magnetic fields and interactions with a binary companion. However, within a time scale of as little as 10 000 years the nebula fades from view and merges with the interstellar medium.Similar variations in the shape of planetary nebulae (PNe) can be seen in both the Galactic Bulge and Disc and in the Magellanic Clouds. It is therefore reasonable to assume that the shaping process is universal. By classifying PNe by morphology and relating those shapes to other nebular properties we have attempted to derive information about that shaping process.We have used photometric narrowband observations of a sample of PNe listed in the Strasbourg-ESO Catalogue of Galactic Planetary Nebulae to investigate the relationship between PN morphology and the other PN characteristics. The high resolution images were made using ESO's New Technology Telescope and the Hubble Space Telescope. The information we could obtain directly from the observations was augmented by information in the literature in order to address that question. The observations were used to classify the morphologies of 154 PNe, to estimate the sizes of 138 of those nebulae that we considered to lie within the Galactic Bulge, to determine the orientations of 130 of those Bulge nebulae and to derive photometric fluxes for the 69 PNe which had observations of standard stars made during the same night. Information on central star binarity, nebular abundances and radial and expansion velocity was obtained from the literature.Our photometrically derived PNe line fluxes were used to verify 59 H-beta and 69 [OIII] catalogued values (which were obtained using spectroscopy). We found sufficient discrepancy between the values for 9 PNe to merit a further check taking place.We found no distinguishing relationship between PN morphology and any of PN size, radial velocity, or angular location within the Bulge. The abundances of He and O, and the N/O ratio, are generally lower in bipolar nebulae than in those nebulae with no apparent internal structure. We are unable to come to any conclusion as to a relationship between PN morphology and stellar metallicity.Given the short lifespan of PNe and the age of the Bulge it appears that almost all PNe in the Bulge must be associated with low mass stars. The high ratio of bipolar PNe we found in our Bulge sample suggests that, at least within the Bulge, bipolar nebulae are not necessarily associated with high mass stars. Our results show that unlike the orientations of other types of PNe the orientations of the bipolar nebulae in the Bulge are not randomly distributed. Measured to a line tip to tip along the lobes they peak and have their mean approximately along the Galactic Plane. This suggests that the bipolar PNe originate in a different environment from other morphological types, perhaps related to binary separation. However, we find that bipolarity does not imply common-envelope evolution. If the hypothesis that bipolar nebulae are formed in binary star systems is correct, binary systems in the Galactic Bulge have angular momentum vectors that are preferentially aligned along the Galactic Plane. As the orientation appears to be unrelated to lobe size and hence nebular age, the alignment implies that the non-random nature of the angular momentum vectors originated at the time the Bulge stellar population formed. We suggest that it is due to the direction and strength of the ambient magnetic fields.

A Biologia Computacional tem desenvolvido algoritmos aplicados a problemas relevantes da Biologia. Um desses problemas é a Protein Structure Prediction (PSP). Vários métodos têm sido desenvolvidos na literatura para lidar com esse problema. Porém a reprodução de resultados e a comparação dos mesmos não têm sido uma tarefa fácil. Nesse sentido, o Critical Assessment of protein Structure Prediction (CASP), busca entre seus objetivos, realizar tais comparações. Além disso, os sistemas desenvolvidos para esse problema em geral não possuem interface amigável, não favorecendo o uso por não especialistas da computação. Buscando reduzir essas dificuldades, este trabalho propões o Koala, um sistema baseado em uma plataforma web, que integra vários métodos de predição e análises de estruturas de proteínas, possibilitando a execução de experimentos complexos com o uso de fluxos de trabalhos. Os métodos de predição disponíveis podem ser integrados para a realização de análises dos resultados, usando as métricas RMSD, GDT-TS ou TM-Score. Além disso, o método Sort by front dominance (baseado no critério de optimalidade de Pareto), proposto nesse trabalho, consegue avaliar predições sem uma estrutura de referência. Os resultados obtidos, usando proteínas alvo de artigos recentes e do CASP11, indicam que o Koala tem capacidade de realizar um conjunto relativamente grande de experimentos estruturados, beneficiando a determinação de melhores estruturas de proteínas, bem como o desenvolvimento de novas abordagens para predição e análise por meio de fluxos de trabalho. / Computational Biology has developed algorithms applied to relevant problems from Biology. One of these probems is Protein Structure Prediction (PSP). Several methods have been developed on the liteture to deal with this problem. However, the reproduction of results and the comparison of the methods have not been an easy task. Accordingly, the Critical Assessment of protein Structure Prediction (CASP), has among his objectives, perform these comparisons. Besides, the developed systems for this problem have low usability, not benefiting the investigation of various methods by non experts. In order to minimize those difficulties, this project proposes Koala, a web-based system that integrates several algorithms applied to PSP and analysis, allowing the execution of complex experiments by using workflows. The prediction methods can be integrated to perform some analysis of the results, by using the RMSD, GDT-TS and TM-Score metrics. Moreover, the Sort by front dominance method (based on the criterion of Pareto optimalidad), proposed on this work, can evaluate predictions with no reference structure. The results obtained, using target proteins from recent articles and CASP11, indicate that Koala has the capability to execute a relatively large set of organized experiments, benefiting determining of better protein structures, as well as the development of new approaches for prediction and analysis through workflows.

Nós realizamos um estudo estatístico do comportamento de perfis de cor em bandas largas (UBV) para 257 galáxias espirais do tipo Sbc, ordinárias e barradas, utilizando dados obtidos através de fotometria fotoelétrica de abertura, disponíveis na literatura (Longo & de Vaucouleurs 1983,1985). Nós determinamos os gradientes de cor (B-V) e (U-B) para as galáxias da amostra total, bem como os índices de cor (B-V) e (U-B) de bojos e discos separadamente, utilizando métodos estatísticos robustos. Utilizamos uma técnica de decomposição bi-dimensional para modelar os perfis de brilho de bojos e discos em imagens dos arquivos do ``Digitised Sky Survey' (DSS), obtendo parâmetros estruturais característicos para 39 galáxias. A aquisição de imagens de 14 galáxias no Laboratório Nacional de Astrofísica permitiu-nos realizar um estudo fotométrico comparativo, e atestar a validade dos resultados obtidos neste estudo. Entre os principais resultados obtidos, destacam-se: (i) - 65% das galáxias possuem gradientes de cor negativos (mais vermelhos no centro), 25% possuem gradientes nulos, e 10% apresentam gradientes positivos; (ii) - galáxias que apresentam gradientes de cor nulos tendem a ser barradas; (iii) - os índices de cor ao longo das galáxias com gradientes nulos são similares aos índices de cor dos discos das galáxias com gradientes negativos; (iv) - confirmamos a correlação entre os índices de cor de bojos e discos, já obtida por outros autores; (v) - a ausência de correlação entre os gradientes de cor e de metalicidade sugere que o excesso de galáxias barradas com gradientes de cor nulos ou positivos reflete uma diferença no comportamento da idade média da população estelar ao longo de galáxias barradas e ordinárias; (vi) - galáxias com gradientes de cor nulos ou positivos têm uma leve tendência a apresentar bojos maiores e com maior concentração central de luz; e (vii) - confirmamos a correlação entre as escalas de comprimento de bojos e discos, já obtida por outros autores. Estes resultados são compatíveis e favoráveis ao cenário de evolução secular, no qual barras produzem fluxos radiais de massa para as regiões centrais de galáxias, não somente homogeneizando as populações estelares ao longo de galáxias, produzindo discos e bojos com índices de cor semelhantes, mas também contribuindo para a formação e/ou construção de bojos. / We have done a statistical study of the behaviour of the broadband color profiles (UBV) for 257 Sbc galaxies, barred and unbarred, collecting data obtained through photoeletric aperture photometry, available in the literature (Longo & de Vaucouleurs 1983,1985). We have determined (B-V) and (U-B) color gradients for the total sample of galaxies, as well as (B-V) and (U-B) color indices of bulges and disks separately, using robust statistical methods. Applying a bi-dimensional decomposition technique to model the brightness profiles of bulges and disks in images from the Digitised Sky Survey (DSS), we obtained characteristic structural parameters for 39 galaxies. The acquisition of images for 14 galaxies in the Laboratório Nacional de Astrofísica (Astrophysics National Laboratory) allowed us to do a comparative photometric study, and verify the validity of the results obtained in this work. Among the main results obtained, we point out: (i) - 65% of the galaxies have negative color gradients (reddish inward), 25% have zero gradients, and 10% show positive gradients; (ii) - galaxies that show zero color gradients tend to be barred; (iii) - the color indices along the galaxies with zero color gradients are similar to the color indices of the disks of the galaxies with negative color gradients; (iv) - we confirm the correlation between the color indices of bulges and disks, already found by other authors; (v) - the absence of correlation between color and metallicity gradients suggests that the excess of barred galaxies with zero or positive color gradients reflects a difference in the behaviour of the mean age of the stellar population along barred and unbarred galaxies; (vi) - galaxies with zero or positive color gradients show a slight tendency of having larger bulges, with a greater central concentration of light; and (vii) - we confirm the correlation between the scale lenghts of bulges and disks, already found by other authors. These results are compatible and favourable to the secular evolutionary scenario, in which stellar bars induce radial mass fluxes to the central regions of galaxies, not only turning homogeneous the stellar populations along the galaxies, producing disks and bulges with similar color indices, but also contributing to the formation and/or building of galactic bulges.

The population and formation of dwarf galaxies, Mr > −14, contain clues about the nature of dark matter. The best place to search for these dwarf galaxies without influence from nearby large galaxies is within galaxy voids, where no galaxies have yet been found. To search for this potential dwarf galaxy population we have developed and applied a new photometric technique. We use three redshifted Ha filters, designated Ha8, Ha12, and Ha16, along with the Sloan broadband filters, g', r', and i' to identify emission line galaxies. From the ratio of the object flux through the Ha filters, Ha12-Ha8 and Ha12-Ha16, we are able to determine the distance to these galaxies and the strength of the emission line captured in the filter set. One problem with using just the three Ha filters is that the system will be sensitive to any emission line which has been redshifted enough to fall within the set. Of particular concern are the [OII] and [OIII] lines which will contaminate the sample. To overcome this we use a color-color relation, g' - r' and r' - i', to help separate which type of emission has been detected. We have applied this method to search for galaxies within the void FN2 and FN8. From this we have found 23 candidate objects which could have Ha emission placing them inside of the void. To better understand the population density dwarf galaxies through voids we have also modeled the population of objects which we will detect having Ha emission compared to the contamination of back ground objects which we can then use to compare the density in the void with the mean galaxy density. We have also begun taking spectra of the emission objects, to ensure our method does detect emission line objects, to test how well the distance and emission strength determination is, and to begin identifying which type of emission we have detected. To date we have taken spectra on 6 objects. All 6 showed emission, 4 with [OII] and 2 with [OIII]. Though none was Ha we formed a “pseudo-redshift” to determine the accuracy of our measurements. This shows that our method is accurate to -127+-204 km/sec.

Galaxy clusters are the largest gravitationally-bound structures in the universe. Since clusters are comprised of hundreds of galaxies, hot X-ray emitting gas, and dark matter, they offer a unique laboratory in which to explore the evolution of large-scale structure and galaxies. To understand how massive, low-redshift galaxy clusters evolve to become what is observed in the modern universe, astronomers need to trace the evolution of progenitor clusters. Though there are thousands of well-studied low-redshift clusters, there are significantly fewer spectroscopically confirmed high-redshift clusters. Because most massive galaxies host supermassive black holes, one cluster tracer at both low and high redshift are active galactic nuclei (AGNs). Specifically, bent, double-lobed radio sources are commonly found in clusters. I find high-redshift clusters hosting bent AGNs and explore their evolution and red sequence galaxies over cosmic time. To characterize cluster evolution, I examine the galaxy populations surrounding each AGN to determine if bent AGNs are commonly found within clusters with evolved red sequence populations. I then identify evolution among the member galaxies in the clusters, I estimate cluster morphology, and I explore the relationship between bent radio source morphology and the surrounding cluster. By measuring the color of each galaxy and the overdensity of galaxies surrounding each AGN, I identify 39 red sequence cluster candidates, 17 of which are at redshifts of z > 1.0. Using my red sequence surface density measurement, I show that each bent AGN is not necessarily centrally located, but is generally within ~ 400 kpc of the cluster center. With this sample, I probe the dynamics of the host galaxies using the radio source morphology and find that most of the radio sources do not follow radial paths relative to the cluster center. By analyzing the morphology of the radio sources in my sample, I find that richer clusters host narrower bent sources. I also see a range of red sequence populations in the clusters, with variations, in particular, among the populations of faint red sequence galaxies. With my surface density measurements, I place preliminary constraints on cluster morphology, finding both relaxed and merging systems.

No description available.

Large observational surveys have compiled substantial galaxy samples with an array of different properties across cosmic time. While we have a broad understanding of how galaxies grow and build their observable properties, the details of galaxy growth and evolution pose a fundamental challenge to galaxy evolution theories. Nonetheless, galaxy evolution is ultimately regulated by the properties of the gas reservoir. In this thesis I use numerical simulations to answer key questions related to the galactic gas reservoir, and galaxy mergers: a major transformational process. In Chapter 2 I present an analysis of 28 simulated L* galaxies to understand the physical processes that shape the massive gas reservoir surrounding galaxies (i.e. the circum-galactic medium; CGM). I show that (1) the gas and metal content of the CGM is driven by galaxy growth and the strength/presence of feedback processes, and (2) the ionisation and internal structures of the CGM are shaped by galactic outflows, and active galactic nucleus luminosity. Albeit dependent on internal galactic properties and the physical processes that shape them, the CGM remains greatly diverse, thus posing a challenge for observational surveys. As a follow-up to my study of normal L* galaxy gas halos, in Chapter 3 I present a theoretical study of the effect of galaxy mergers on the CGM. I demonstrate that galaxy mergers can leave a strong imprint on the CGM's gas and metal content, metallicity, and size. The merger can increase (1) the CGM's metallicity by 0.2-0.3 dex within 0.5 Gyr post-merge, and (2) the metal covering fractions by factors of 2-3. In spite of the increase in the CGM's metal content, the hard ionising field during the merger can drive a decline in the covering fractions of commonly observed ions. In Chapter 4 I shift focus to star formation, particularly the effects of galaxy mergers on star formation. While the effects of galaxy mergers have been proven observationally, theoretical predictions are limited to small binary merger suites and cosmological zoom-in studies. I present a statistical study of 27,691 post-merger galaxies from IllustrisTNG to quantify the effect of galaxy mergers on galactic star formation. I report a dependence in the merger-induced star formation rate (SFR) on mass ratio, stellar mass, gas fraction, and galaxy SFR. I also track the evolution of the effects of galaxy mergers demonstrating their decay over ~500 Myr. In Chapter 6, I leverage galactic scaling relations to extend my work on the effects of galaxy mergers to resolved scales. However, before using the simulated resolved scaling relations, I first examine their existence and robustness. In Chapter 5, I demonstrate the emergence of the kpc-scale star forming main sequence (rSFMS) in the FIRE-2 simulations. Nonetheless, the slope of the rSFMS is dependent on the (1) star formation tracer's timescale, and (2) observed resolution, which I propose is caused by the clumpiness of star formation. I develop a toy model that quantitatively captures the effects of clumpy star formation. I then illustrate how the model can be used to characterise the mass of star-forming clumps. Having demonstrated the existence and robustness of known scaling relations in numerical simulations, I explore the effects of galaxy mergers on resolved scales in Chapter 6. I generate synthetic observations for 1,927 post-mergers in IllustrisTNG and examine the radially-dependent merger-driven SFR enhancement, and metallicity suppression in post-mergers. Galaxy mergers preferentially boost star formation in the centres and suppress metallicities globally. The effects of the merger depends on galaxy properties such as stellar mass, SFR, mass ratio, and gas fraction. / Graduate

No description available.

For a set of merging galaxies in the local Universe, we use archival Chandra X-ray data along with published 2.6 mm CO and 21 cm HI fluxes to determine the hot, cold, and warm interstellar gas masses, respectively. We determine how the relative amount of the different gas phases vary with merger stage, star formation rate, star formation efficiency, and stellar mass. We use these results to test models of stellar feedback during merger-triggered starbursts.