Thesis (Ph. D.)--Case Western Reserve University, 2009. / [School of Medicine] Department of Neurosciences. Includes bibliographical references.

Thesis (Ph.D. in Neuroscience) -- University of Colorado Denver, 2008. / Typescript. Includes bibliographical references (leaves 145-165). Free to UCD affiliates. Online version available via ProQuest Digital Dissertations;

Axon pathfinding is an important process required for the establishment of proper neuronal connections during development. An increasing number of secreted and membrane-anchored molecules have been identified as axon guidance cues, which can act as positive or negative factors to increase or decrease the growth of axons and influence the direction of axonal growth. These axon guidance factors present in the extracellular environment interact with receptors present on the growth cone, a structure located at the tip of the axon which functions as the motor unit for the axon. Upon binding to their receptors on the growth cone, the guidance factors then elicit an intracellular signaling cascade within the axon that ultimately influences the direction of axon growth, often through a direct, non-transcriptional mechanism. In this dissertation, we show that Sonic hedgehog (Shh) acts as an axon guidance factor for chick retinal ganglion cell (RGC) axons in a concentration-dependent manner. At a low concentration, Shh functions as a positive factor that induces axon growth and attractive turning while, at a high concentration, Shh functions as a negative factor that induces axon retraction and repulsive axon turning. We further characterized the effects of Shh on macropinocytosis, a fluid-phase type of endocytosis, in the axons. A high concentration of Shh significantly increased macropinocytosis in the axons. Macropinocytosis resulted in the generation of large, dextran-positive, clathrinindependent vesicles in the axonal growth cones, prior to growth cone collapse, axon retraction and repulsive axon turning. These vesicles were found to require dynamic F-actin, nonmuscle myosin II and dynamin for their formation but were formed independently of PI3 kinase signaling. Interestingly, a low concentration of Shh had an opposite effect on macropinocytosis. A low concentration of Shh and soluble laminin decreased macropinocytosis and additionally increased the turnover of these vesicles within the axons, suggesting positive axon guidance factors can additionally regulate downstream processing or maturation of these vesicles. The effect of Shh on regulating the motility of macropinosomes within the axons was investigated. A low concentration of Shh appeared to increase the motility of these vesicles along axonal microtubules in a cAMPdependent manner. However, a high concentration of Shh did not appear to affect the motility of the macropinosomes, suggesting that it likely plays a more predominant role in the formation of these vesicles within the growth cone. When we began this work, a large body of research existed describing the effects of guidance factors on regulating the cytoskeleton during axon motility. However, the role of membrane trafficking events during axon growth and guidance were very poorly characterized. Since we began this project, an increasing number of reports have shown that endo- and exocytosis are important for axon growth and, here, we show that macropinocytosis induced by negative axon guidance factors plays a critical role in growth cone collapse, axon retraction and repulsive axon turning. Positive axon guidance factors also affect macropinocytosis within the axons and additionally regulate their maturation, suggesting that membrane trafficking events mediated by axon guidance factors are important for regulating axon growth and pathfinding.

Les neurones établissent entre eux de nombreux contacts synaptiques, et l'on estime qu’en moyenne un neurone peut avoir dix mille contacts avec les neurones de son voisinage. L'une des synapses les plus importantes et les plus étudiées, dont les dysfonctionnements conduisent à des pathologies du cerveau, est la synapse excitatrice glutamatergique. Dans l’hippocampe, les synapses excitatrices présentent une structure postsynaptique particulière, sous la forme d’un renflement de la dendrite appelé épine dendritique. Cette épine possède un domaine particulier, la densité postsynaptique, concentrant de nombreux récepteurs aux glutamates, des protéines d’adhésion ainsi que des protéines d’échafaudage faisant le lien avec les cascades moléculaires intracellulaires et le cytosquelette d’actine. La morphologie de l’épine dendritique ainsi que le nombre de récepteurs présents dans la PSD sont des éléments clés dans la transmission synaptique et les phénomènes de potentiation et de dépression à long terme (LTP & LTD). Lors de ma thèse, j’ai identifié Scribble1 comme une nouvelle protéine régulant le trafic des récepteurs NMDA. Scribble1 est surtout connue pour son implication dans des processus de polarité, division et migration cellulaire. En modulant le taux de Scribble1, j’ai montré que je pouvais affecter le nombre et la morphologie des épines des neurones hippocampaux, ainsi que la polymérisation de l’actine. Ensuite, j’ai démontré que Scribble1 interagissait directement avec les récepteurs NMDA et permettait leur recyclage à la membrane. Enfin, chez le neurone immature, Scribble1 est impliqué dans la migration du cône axonal. Chez un animal mutant, qui n’exprime que 50% de la protéine (circletail) les performances mnésiques et sociales de l’animal sont perturbées, validant le rôle de la protéine au niveau du système nerveux. / One of the most studied and more important synapse is the glutamatergic excitatory synapse, which dysfunctions lead to brain pathologies. In the hippocampus, the most represented synapses are glutamatergic synapses using glutamate as neurotransmitter. Postsynaptic structures, such as dendritic spines, concentrate many glutamate receptors, adhesion proteins and scaffold proteins bridging receptors to molecular cascades and intracellular actin cytoskeleton. The morphology of the dendritic spine and the number of glutamate receptors at the surface of the spine are key-elements in synaptic transmission, such as of long-term potentiation (LTP). In this study, I identify Scribble1 as an important regulator of NMDA receptors trafficking. Scribble1 is well known for its roles in cell polarity, division and migration processes. First, I show that Scribble1 gain- and loss-of-function affect the number and morphology of spines, as well as the actin polymerization. Next, I showed that Scribble1 interacts directly with the NMDA receptor and stimulates its recycling to the membrane. Finally, in immature neuron, Scribble1 is involved in axon growth cone migration. In a Scribble1 mutant animal model, circletail, we observed disruption of synaptic transmission and memory and social performance defects, compatible with a role of the protein in central nervous system function.

Magistro darbe tiriama mikrobangų poveikis įvairių rūšių medžiams. Darbo objektas – Paprastosios pušies ( Pinus sylvestris L. ) sėklų gemalai, paprastosios eglės (Picea abies (L.) Karst.) gemalai ir augimo kūgeliai, paprastojo uosio ( Fraxinus excelsior L.) gemalai, karpotojo beržo (Betula pendula L.) žiedadulkės. Darbo tikslas – Įvertinti mikrobangų poveikį skirtingų medžių rūšių subrendusių gemalų ir žiedadulkių gyvybingumui. Darbo metodika – mikrobangomis paveikiami subrendę gemalai, augimo kūgeliai žiedadulkės ir distiliuotas vanduo. Įvertinama mikrobangų įtaka gemalų, augimo kūgelių, žiedadulkių gyvybingumui. Rezultatai – Mikrobangos 600 W rėžime neigiamai veikia eglės, pušies ir uosio subrendusių gemalų gyvybingumą. Iš tirtų 480 subrendusių gemalų gyvybingi liko 183 eksplantai ( 38,1 %). Paveikus mikrobangomis beržo žiedadulkes, bangos stabdė žiedadulkių vystymąsi. Paveiktas mikrobangomis distiliuotas vanduo teigiamai veikė karpotojo beržo žiedadulkes, skatindamas žiedadulkių dygimą. Paprastosios eglės augimo kūgeliai paveikti mikrobangomis žuvo visuose eksperimento variantuose, išskyrus nepaveikti mikrobangomis augimo kūgeliai. / In the postgraduate thesis studied effect of microwaves on different trees species. Study object. Mature germ of Common Scots pine (Pinus sylvestris L.), Common Ash (Fraxinus excelsior L.), mature germ and growth cones of Norway spruce (Picea abies (L.) Karst.), pollen of Silver Birch (Betula pendula L.). Purpose of the study – to estimate the effect of microwaves on different trees species of mature germ and pollen viability. Study methods. Affected by microwaves mature germs, growth cones, pollen and distilled water. Rated microwave power of germs, growth cones and pollen viability. Results. Microwave 600 W mode affects spruce, pine and ash mature germs viability. Of investigated 480 mature germs remained viable explants 183 (38.1%). Birch pollen exposed of microwave, the waves slowed the development of pollen. Affected by microwave distilled water acted positively Silver birch pollen and stimulating germination. Growth cones of Norway spruce were killed of microwave affect all versions on the experiment, except do not affect the growth cone of microwaves.

Thesis (Ph.D. in Cell and Developmental Biology) -- University of Colorado at Denver and Health Sciences Center, 2005. / Typescript. Includes bibliographical references (leaves 123-141). Free to UCDHSC affiliates. Online version available via ProQuest Digital Dissertations;

Yra žinoma, jog nervinės ląstelės gali regeneruoti savo aksonus po periferinės, o tam tikrais atvejais ir po centrinės nervų sistemos pažeidimų. Tačiau aksonų augimas yra sudėtingas, o jo reguliacija turi kritinę įtaką tiek neuronų vystymęsi, tiek regeneracijoje. Vekiami aplinkinių ląstelių, išskiriamų pritraukiančiųjų ir atstumiančiųjų molekulių, aksonai augdami nuolat keičia augimo kryptis iki kol pasiekia galutinius taikinius. Dorsalinių ragų ganglijų (DRG) aksonų augimas priklauso nuo semaforinų klasės molekulių. Sekretuojantys, ar su membrana surišti semaforinai dalyvauja įvairiuose biologiniuose procesuose, tokiuose, kaip centrinės ir periferinės nervų sistemos (CNS ir PNS) vystymęsi ir regeneracijoje, širdies ir kraujagyslių vystymęsi ir imuninės sistemos funkcijose. DRG aksonų vystymasis ir išlikimas smarkiai priklauso nuo nervų augimo faktoriaus (NGF). Darbo tikslas buvo įvertinti NGF koncentracijos įtaką DRG aksonų augimo atsakams į semaforiną 3A. 15 parų pelių embrionų DRG buvo preparuojami iš C57/Bl linijos pelių embrionų. DRG neuronų auginimui naudoti sterilūs dengiamieji stikleliai buvo padengiami poli-L-lizino 0,01 mg/ml ir laminino 0,01 mg/ml tirpalu, pagamintu GBSS terpėje. Aksonų augimo kūgelių vertinimas buvo atliekamas praėjus 60 minučių, o aksonų ilgio vertinimas - praėjus 16 valandų po DRG pasodinimo. Tam, kad nustayti DRG apoptozės lygį, DRG neuronuose priklausomai nuo NGF koncentracijos buvo įvertinta Bcl-2, Bax, c-jun genų raiška, naudojant RT - PGR... [toliau žr. visą tekstą] / It is known that nerve cells can regenerate their axons after damage to peripheral and in some cases central nervous system (PNS and CNS). However, axon growth over longer distances, especially in central nervous system, is complicated. Regulation of axon growth is a critical event both in neuronal development and regeneration. To reach their proper targets, axons rely upon the actions of attractive and repulsive guidance molecules. It is known that growth of dorsal root ganglion (DRG) axons depend on guidance molecules of semaphorin class. Secreted and membrane bound semaphorins participate in diverse biological processes, including development and regeneration of central and peripheral nervous system, cardiovascular development, and immune system functioning. In addition to regulation of DRG axon growth by semaphorin class molecules, DRG axon growth and survival is strongly dependent on nerve growth factor (NGF). The aim of this study was to evaluate responses of DRG axons to semaphorin 3A in dependence of NGF concentration. DRG were dissected from C57/Bl mice E15 embryos in dissection HBSS/glucose medium. DRG were plated on cover slips coated with laminin and poly-L-lysine and grown in Neurobasal medium supplemented with 2% of B27 supplement. To evaluate collapse rate the morphology of axons growth cones were evaluated after 60 minutes and axons length were evaluated 16 hours after DRG plating. To evaluate DRG survival and level of apoptosis in dependence of NGF... [to full text]

The imidazoline I1 receptor (I1-R) is a novel receptor found primarily in the brain and nervous tissue where it modulates neurotransmission. It is named for its high affinity for compounds with an imidazoline structure such as the anti-hypertensive drugs, clonidine and moxonidine. The imidazoline receptor antisera-selected protein (IRAS) is the putative clone of the I1-R. IRAS has a unique structure, which does not resemble any other receptor protein. IRAS is present throughout the body with highest levels in the brain. There is a growing body of research examining the physiological roles of IRAS as an I1-R, in cell survival, migration and protein trafficking. However, there is little research into its neuronal functions. IRAS interacts with other membrane receptors: the mouse homologue of IRAS reorganises the actin cytoskeleton through interaction with the α5β1 fibronectin receptor. IRAS also binds insulin receptor substrate 4 and enhances insulin-induced extracellular signal-regulated kinase1/2 (ERK1/2) activation. Actin reorganisation and ERK1/2 activation are important for the development of neurites during neuronal differentiation. Therefore, the work described in this thesis aimed to investigate the effects of IRAS on neuronal differentiation. Studies reported in this thesis also aimed to investigate whether IRAS affected ERK1/2 signalling of other receptors involved in neuronal differentiation such as the NGF receptor, TrkA, and lysophospholipid receptors. The above aims were carried out in neuronal model PC12 cells transfected with either IRAS or a vector plasmid. Fluorescence microscopy and Western blotting techniques were used to examine the effect of IRAS on cell morphology and ERK1/2 signalling. The work described in this thesis found that IRAS reorganises the actin cytoskeleton and enhances growth cone development in PC12 cells. This study also shows that IRAS differentially enhances or inhibits NGF-induced PC12 cell differentiation depending on the presence or absence of serum in the media. In full-serum conditions, IRAS enhanced neurite outgrowth and this was accompanied by an increase in ERK1/2 activation. In serum-starved cells, IRAS inhibited neurite outgrowth with similar levels of ERK1/2 activation observed in vector- and IRAS-transfected cells. Finally, studies presented in this thesis found that IRAS enhances lysophosphatidic acid-induced ERK1/2 activation and that IRAS interacting with lysophospholipid receptor agonists present in serum is a potential mechanism by which it enhances NGF-induced ERK1/2 activation in full-serum conditions. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1345359 / Thesis (Ph.D.) - University of Adelaide, School of Medical Sciences, 2008

<p dir="ltr">This dissertation delves into two research projects that aim to characterize post-translational modifications in two distinct proteins, each originating from a different species – one from the eukaryotic sea slug Aplysia californica and the other from the bacterial pathogen Bordetella bronchiseptica.</p><p dir="ltr">Aplysia have an unusually large neuron and therefore serve as an excellent model for studying cell signaling regulating neuronal chemotaxis. Cortactin is an actin binding protein that is regulated by post-translational modifications, including acetylation and phosphorylation. Studies have shown that Src2 tyrosine kinase phosphorylates cortactin to regulate lamellipodia protrusion and filopodia formation in Aplysia bag cell neurons. However, these in vivo phenotypes have not been tested mechanistically in vitro. To this end, the goal of my thesis work was to validate in vivo observations. The following work describes the methodology we developed to purify homogenous non-phosphorylated proteins. Our collaborative results show that Src2 phosphorylates cortactin at Y499, although Y505 is the preferred site in vitro.</p><p dir="ltr"> Filamentation induced by cAMP (Fic) proteins constitute a recently characterized family of enzymes that are being recognized to regulate diverse cellular processes in bacteria and metazoans. While Fic proteins predominantly utilize adenosine triphosphate (ATP) to post-translationally modify target proteins via a covalent addition of AMP, two Fic proteins have been reported that utilize uridine triphosphate (UTP) and cytidine diphosphate-choline (CDP-choline) to alter the activity of their target. In this dissertation, we report the discovery of the first guanosine triphosphate (GTP) specific Fic protein – BB0907 (BbFic) from Bordetella bronchiseptica. BbFic displays weak to no binding to ATP; instead has a 10-fold increased preferential usage for GTP. We identify key residues involved in GTP recognition. Additionally, sequence similarity network (SSN) analyses reveal that BbFic represents a distinct clade of Fic proteins, highlighting BbFic as a representative new class of guanylyltransferase. Our discovery adds to the functional diversity of the growing Fic protein family and frames the groundwork for understanding Fic-mediated GMPylation as a novel signaling paradigm. </p><p dir="ltr">Taken together, my thesis work provides novel insights into biological consequences of Fic-mediated GMPylation in bacteria and Src-mediated phosphorylation in filopodia formation.</p><p><br></p>