Nesse estudo comparou-se o efeito tamponante do HEPES e Bicarbonato de Sódio em manter o pH e a viabilidade do sêmen resfriado de pôneis da raça Brasileira. As alterações no pH ocasionadas por diferentes diluições com diluente a base de leite desnatado em pó sem tampão a 5 e a 15°C também foram medidas. No experimento 1 avaliou-se o efeito da diluição e da temperatura de resfriamento sobre a motilidade, integridade de membrana, pH e atividade mitocondrial do sêmen pré e pós resfriamento. O sêmen de nove pôneis da raça Brasileira (dois ejaculados/pônei) foi diluído em diluente a base de leite desnatado (em pó) sem tampão e refrigerado a 5 ou 15°C por 48h em três diferentes diluições (1+1, 1+2, 1+3). As três diluições não alteraram os parâmetros avaliados após a diluição a fresco. A diluição 1+1 resultou em valores maiores de pH (7,63 e 7,57, respectivamente) e menor percentual de motilidade progressiva (MP) a 5 e a 15°C. O maior percentual de células íntegras (1+1=44,16; 1+2=48,16; 1+3=50,05) foi detectado a 15°C (P < 0,01), independente da diluição. A MP foi maior nas 48h de resfriamento (39,72%; P < 0,05) quando o sêmen foi diluído a 1+3 e refrigerado a 15°C. A atividade mitocondrial (P > 0,05) em função do tempo e temperatura foi similar entre as diluições. No experimento 2 avaliou-se o efeito tampão do bicarbonato de sódio e do HEPES em diluentes sobre a viabilidade de espermatozoides resfriados a 5°C durante 48h. Os diluentes testados compunham-se de leite desnatado em pó com bicarbonato de sódio (A), HEPES (B) ou diluente sem tampão (C). O sêmen de sete pôneis da raça Brasileira (três ejaculados/pônei) foi utilizado e a motilidade progressiva foi similar entre os diluentes (P > 0,05) após a diluição. Nas 24 e 48h, a MP foi, respectivamente, para A (44,76%; 25,23%), B (51,42%; 38,09%) e C (54,05%; 41,66%). A integridade da membrana plasmática foi similar após a exposição aos três diluentes. A fresco, a atividade mitocondrial foi maior (P < 0,05) no sêmen exposto ao diluente A (A=1,05nm, B=0,81nm, C=0,79nm) e após 24h A e B foram similares (0,83nm; 0,73nm), enquanto que no diluente C observou-se menor atividade (0,64nm). Nas 48h não houve diferença (A=0,72; B=0,69; C=0,63; P > 0,05). O pH do diluente e sua osmolaridade, assim como o pH do sêmen diluído foi maior no diluente A (8; 382; 7,9), intermediário (7,5; 362; 7,32) no B e menor no C (7,16; 350; 7,07). A peroxidação lipídica e a indução da peroxidação foram similares em todos os grupos. Sugere-se que, quando da utilização do sêmen a fresco, qualquer das diluições aqui testadas pode ser utilizada com segurança. O resfriamento do sêmen por 48h modifica e eleva o pH do sêmen. Os melhores resultados foram observados com o resfriamento do sêmen a 15°C por 48h e com a diluição 1+3 em um diluente a base de leite em pó desnatado sem tampão. O bicarbonato de sódio (A) reduz a MP e aumenta o pH do sêmen. O diluente sem tampão foi considerado o mais apropriado para uso imediato na IA. Tanto o diluente com HEPES, quanto o diluente sem tampão foram adequados para o resfriamento do sêmen equino a 5°C durante 48h. / This study compared the buffering effect of HEPES and sodium bicarbonate on pH and viability of Brazilian pony semen cooled at 5°C. pH changes caused by different dilutions using skim milk powder semen extender without buffer were also measured. In experiment 1, the effect of dilution and cooling temperature on semen motility, membrane integrity, mitochondrial activity and pH pre and post cooling was investigated. Ejaculates of nine Brazilian ponies (two ejaculates per pony) were diluted, of a non buffered powder milk extender and cooled at 5°C or 15°C during 48h in three different dilutions (1+1, 1+2 and 1+3). Dilutions did not change the parameters evaluated before cooling. Samples diluted 1+1 resulted in higher pH values (7.63 and 7.57, respectively) and lowest percentage of progressive motility (PM) at 5 and 15°C. All samples cooled at 15°C showed a lower incidence of abnormal spermatozoa (1+1 = 55.84%; 1+2 = 51.84%; 1+3 = 49.95%) (P < 0.01) independent of dilution. Progressive motility was higher when semen was cooled during 48h in 1+3 dilution at 15°C (39.72%; P < 0.05). Mitochondrial activity despite of time and temperature was similar (P > 0.05) among dilutions. In experiment 2, the buffer effect of sodium bicarbonate and HEPES on extenders were evaluated considering the maintenance of sperm viability after cooling at 5°C during 24 and 48h. A non-buffered milk powder extender (C = control) and the same extender buffered with Sodium Bicarbonate (A) and HEPES (B) was used. Semen from 7 Brazilian ponies (three ejaculates / pony) was used. Immediately after dilution sperm motility was evaluated and progressive motility was similar with all extenders (P > 0.05). At 24 and 48h after cooling at 5oC sperm motility was evaluated, respectively, on groups A (44.76%; 25.23%), B (51.42%; 38.09%) and C (54.05%; 41.66%). Plasma membrane integrity was similar after exposure to the three extenders. Before cooling, mitochondrial activity was higher (P <0.05) in extender A (A = 1.05nm, B = 0.81nm, C = 0.79nm). Mitochondrial activity after cooling for 24h was 0.83nm (A), 0.73nm (B) and 0.64nm (C). After 48h it decreased to 0.72nm (A), 0.69nm (B) and 0.63nm (C) (P > 0.05), respectively. The extenders pH, osmolarity and pH of diluted semen was higher in A (8; 382; 7.9), intermediate in B (7.5; 362; 7.32) and lower in C (7.16; 350; 7.07). Lipid peroxidation and its induction were similar in all groups. It was concluded that all dilution grades in fresh semen were adequate and that pH was affected and increased when semen was extended and cooled for 48h. The best results were observed when semen was diluted at 1+3 and cooled at 15°C for 48h in a non buffered powder milk extender. Sodium bicarbonate (A) reduces progressive motility and increases semen pH. The non buffered (C) semen extender was considered more appropriated for semen dilution for immediate use in artificial insemination. The non buffered and HEPES buffered semen extenders were considered appropriated for cooling equine semen at 5°C during 48h.

Nesse estudo comparou-se o efeito tamponante do HEPES e Bicarbonato de Sódio em manter o pH e a viabilidade do sêmen resfriado de pôneis da raça Brasileira. As alterações no pH ocasionadas por diferentes diluições com diluente a base de leite desnatado em pó sem tampão a 5 e a 15°C também foram medidas. No experimento 1 avaliou-se o efeito da diluição e da temperatura de resfriamento sobre a motilidade, integridade de membrana, pH e atividade mitocondrial do sêmen pré e pós resfriamento. O sêmen de nove pôneis da raça Brasileira (dois ejaculados/pônei) foi diluído em diluente a base de leite desnatado (em pó) sem tampão e refrigerado a 5 ou 15°C por 48h em três diferentes diluições (1+1, 1+2, 1+3). As três diluições não alteraram os parâmetros avaliados após a diluição a fresco. A diluição 1+1 resultou em valores maiores de pH (7,63 e 7,57, respectivamente) e menor percentual de motilidade progressiva (MP) a 5 e a 15°C. O maior percentual de células íntegras (1+1=44,16; 1+2=48,16; 1+3=50,05) foi detectado a 15°C (P < 0,01), independente da diluição. A MP foi maior nas 48h de resfriamento (39,72%; P < 0,05) quando o sêmen foi diluído a 1+3 e refrigerado a 15°C. A atividade mitocondrial (P > 0,05) em função do tempo e temperatura foi similar entre as diluições. No experimento 2 avaliou-se o efeito tampão do bicarbonato de sódio e do HEPES em diluentes sobre a viabilidade de espermatozoides resfriados a 5°C durante 48h. Os diluentes testados compunham-se de leite desnatado em pó com bicarbonato de sódio (A), HEPES (B) ou diluente sem tampão (C). O sêmen de sete pôneis da raça Brasileira (três ejaculados/pônei) foi utilizado e a motilidade progressiva foi similar entre os diluentes (P > 0,05) após a diluição. Nas 24 e 48h, a MP foi, respectivamente, para A (44,76%; 25,23%), B (51,42%; 38,09%) e C (54,05%; 41,66%). A integridade da membrana plasmática foi similar após a exposição aos três diluentes. A fresco, a atividade mitocondrial foi maior (P < 0,05) no sêmen exposto ao diluente A (A=1,05nm, B=0,81nm, C=0,79nm) e após 24h A e B foram similares (0,83nm; 0,73nm), enquanto que no diluente C observou-se menor atividade (0,64nm). Nas 48h não houve diferença (A=0,72; B=0,69; C=0,63; P > 0,05). O pH do diluente e sua osmolaridade, assim como o pH do sêmen diluído foi maior no diluente A (8; 382; 7,9), intermediário (7,5; 362; 7,32) no B e menor no C (7,16; 350; 7,07). A peroxidação lipídica e a indução da peroxidação foram similares em todos os grupos. Sugere-se que, quando da utilização do sêmen a fresco, qualquer das diluições aqui testadas pode ser utilizada com segurança. O resfriamento do sêmen por 48h modifica e eleva o pH do sêmen. Os melhores resultados foram observados com o resfriamento do sêmen a 15°C por 48h e com a diluição 1+3 em um diluente a base de leite em pó desnatado sem tampão. O bicarbonato de sódio (A) reduz a MP e aumenta o pH do sêmen. O diluente sem tampão foi considerado o mais apropriado para uso imediato na IA. Tanto o diluente com HEPES, quanto o diluente sem tampão foram adequados para o resfriamento do sêmen equino a 5°C durante 48h. / This study compared the buffering effect of HEPES and sodium bicarbonate on pH and viability of Brazilian pony semen cooled at 5°C. pH changes caused by different dilutions using skim milk powder semen extender without buffer were also measured. In experiment 1, the effect of dilution and cooling temperature on semen motility, membrane integrity, mitochondrial activity and pH pre and post cooling was investigated. Ejaculates of nine Brazilian ponies (two ejaculates per pony) were diluted, of a non buffered powder milk extender and cooled at 5°C or 15°C during 48h in three different dilutions (1+1, 1+2 and 1+3). Dilutions did not change the parameters evaluated before cooling. Samples diluted 1+1 resulted in higher pH values (7.63 and 7.57, respectively) and lowest percentage of progressive motility (PM) at 5 and 15°C. All samples cooled at 15°C showed a lower incidence of abnormal spermatozoa (1+1 = 55.84%; 1+2 = 51.84%; 1+3 = 49.95%) (P < 0.01) independent of dilution. Progressive motility was higher when semen was cooled during 48h in 1+3 dilution at 15°C (39.72%; P < 0.05). Mitochondrial activity despite of time and temperature was similar (P > 0.05) among dilutions. In experiment 2, the buffer effect of sodium bicarbonate and HEPES on extenders were evaluated considering the maintenance of sperm viability after cooling at 5°C during 24 and 48h. A non-buffered milk powder extender (C = control) and the same extender buffered with Sodium Bicarbonate (A) and HEPES (B) was used. Semen from 7 Brazilian ponies (three ejaculates / pony) was used. Immediately after dilution sperm motility was evaluated and progressive motility was similar with all extenders (P > 0.05). At 24 and 48h after cooling at 5oC sperm motility was evaluated, respectively, on groups A (44.76%; 25.23%), B (51.42%; 38.09%) and C (54.05%; 41.66%). Plasma membrane integrity was similar after exposure to the three extenders. Before cooling, mitochondrial activity was higher (P <0.05) in extender A (A = 1.05nm, B = 0.81nm, C = 0.79nm). Mitochondrial activity after cooling for 24h was 0.83nm (A), 0.73nm (B) and 0.64nm (C). After 48h it decreased to 0.72nm (A), 0.69nm (B) and 0.63nm (C) (P > 0.05), respectively. The extenders pH, osmolarity and pH of diluted semen was higher in A (8; 382; 7.9), intermediate in B (7.5; 362; 7.32) and lower in C (7.16; 350; 7.07). Lipid peroxidation and its induction were similar in all groups. It was concluded that all dilution grades in fresh semen were adequate and that pH was affected and increased when semen was extended and cooled for 48h. The best results were observed when semen was diluted at 1+3 and cooled at 15°C for 48h in a non buffered powder milk extender. Sodium bicarbonate (A) reduces progressive motility and increases semen pH. The non buffered (C) semen extender was considered more appropriated for semen dilution for immediate use in artificial insemination. The non buffered and HEPES buffered semen extenders were considered appropriated for cooling equine semen at 5°C during 48h.

Nesse estudo comparou-se o efeito tamponante do HEPES e Bicarbonato de Sódio em manter o pH e a viabilidade do sêmen resfriado de pôneis da raça Brasileira. As alterações no pH ocasionadas por diferentes diluições com diluente a base de leite desnatado em pó sem tampão a 5 e a 15°C também foram medidas. No experimento 1 avaliou-se o efeito da diluição e da temperatura de resfriamento sobre a motilidade, integridade de membrana, pH e atividade mitocondrial do sêmen pré e pós resfriamento. O sêmen de nove pôneis da raça Brasileira (dois ejaculados/pônei) foi diluído em diluente a base de leite desnatado (em pó) sem tampão e refrigerado a 5 ou 15°C por 48h em três diferentes diluições (1+1, 1+2, 1+3). As três diluições não alteraram os parâmetros avaliados após a diluição a fresco. A diluição 1+1 resultou em valores maiores de pH (7,63 e 7,57, respectivamente) e menor percentual de motilidade progressiva (MP) a 5 e a 15°C. O maior percentual de células íntegras (1+1=44,16; 1+2=48,16; 1+3=50,05) foi detectado a 15°C (P < 0,01), independente da diluição. A MP foi maior nas 48h de resfriamento (39,72%; P < 0,05) quando o sêmen foi diluído a 1+3 e refrigerado a 15°C. A atividade mitocondrial (P > 0,05) em função do tempo e temperatura foi similar entre as diluições. No experimento 2 avaliou-se o efeito tampão do bicarbonato de sódio e do HEPES em diluentes sobre a viabilidade de espermatozoides resfriados a 5°C durante 48h. Os diluentes testados compunham-se de leite desnatado em pó com bicarbonato de sódio (A), HEPES (B) ou diluente sem tampão (C). O sêmen de sete pôneis da raça Brasileira (três ejaculados/pônei) foi utilizado e a motilidade progressiva foi similar entre os diluentes (P > 0,05) após a diluição. Nas 24 e 48h, a MP foi, respectivamente, para A (44,76%; 25,23%), B (51,42%; 38,09%) e C (54,05%; 41,66%). A integridade da membrana plasmática foi similar após a exposição aos três diluentes. A fresco, a atividade mitocondrial foi maior (P < 0,05) no sêmen exposto ao diluente A (A=1,05nm, B=0,81nm, C=0,79nm) e após 24h A e B foram similares (0,83nm; 0,73nm), enquanto que no diluente C observou-se menor atividade (0,64nm). Nas 48h não houve diferença (A=0,72; B=0,69; C=0,63; P > 0,05). O pH do diluente e sua osmolaridade, assim como o pH do sêmen diluído foi maior no diluente A (8; 382; 7,9), intermediário (7,5; 362; 7,32) no B e menor no C (7,16; 350; 7,07). A peroxidação lipídica e a indução da peroxidação foram similares em todos os grupos. Sugere-se que, quando da utilização do sêmen a fresco, qualquer das diluições aqui testadas pode ser utilizada com segurança. O resfriamento do sêmen por 48h modifica e eleva o pH do sêmen. Os melhores resultados foram observados com o resfriamento do sêmen a 15°C por 48h e com a diluição 1+3 em um diluente a base de leite em pó desnatado sem tampão. O bicarbonato de sódio (A) reduz a MP e aumenta o pH do sêmen. O diluente sem tampão foi considerado o mais apropriado para uso imediato na IA. Tanto o diluente com HEPES, quanto o diluente sem tampão foram adequados para o resfriamento do sêmen equino a 5°C durante 48h. / This study compared the buffering effect of HEPES and sodium bicarbonate on pH and viability of Brazilian pony semen cooled at 5°C. pH changes caused by different dilutions using skim milk powder semen extender without buffer were also measured. In experiment 1, the effect of dilution and cooling temperature on semen motility, membrane integrity, mitochondrial activity and pH pre and post cooling was investigated. Ejaculates of nine Brazilian ponies (two ejaculates per pony) were diluted, of a non buffered powder milk extender and cooled at 5°C or 15°C during 48h in three different dilutions (1+1, 1+2 and 1+3). Dilutions did not change the parameters evaluated before cooling. Samples diluted 1+1 resulted in higher pH values (7.63 and 7.57, respectively) and lowest percentage of progressive motility (PM) at 5 and 15°C. All samples cooled at 15°C showed a lower incidence of abnormal spermatozoa (1+1 = 55.84%; 1+2 = 51.84%; 1+3 = 49.95%) (P < 0.01) independent of dilution. Progressive motility was higher when semen was cooled during 48h in 1+3 dilution at 15°C (39.72%; P < 0.05). Mitochondrial activity despite of time and temperature was similar (P > 0.05) among dilutions. In experiment 2, the buffer effect of sodium bicarbonate and HEPES on extenders were evaluated considering the maintenance of sperm viability after cooling at 5°C during 24 and 48h. A non-buffered milk powder extender (C = control) and the same extender buffered with Sodium Bicarbonate (A) and HEPES (B) was used. Semen from 7 Brazilian ponies (three ejaculates / pony) was used. Immediately after dilution sperm motility was evaluated and progressive motility was similar with all extenders (P > 0.05). At 24 and 48h after cooling at 5oC sperm motility was evaluated, respectively, on groups A (44.76%; 25.23%), B (51.42%; 38.09%) and C (54.05%; 41.66%). Plasma membrane integrity was similar after exposure to the three extenders. Before cooling, mitochondrial activity was higher (P <0.05) in extender A (A = 1.05nm, B = 0.81nm, C = 0.79nm). Mitochondrial activity after cooling for 24h was 0.83nm (A), 0.73nm (B) and 0.64nm (C). After 48h it decreased to 0.72nm (A), 0.69nm (B) and 0.63nm (C) (P > 0.05), respectively. The extenders pH, osmolarity and pH of diluted semen was higher in A (8; 382; 7.9), intermediate in B (7.5; 362; 7.32) and lower in C (7.16; 350; 7.07). Lipid peroxidation and its induction were similar in all groups. It was concluded that all dilution grades in fresh semen were adequate and that pH was affected and increased when semen was extended and cooled for 48h. The best results were observed when semen was diluted at 1+3 and cooled at 15°C for 48h in a non buffered powder milk extender. Sodium bicarbonate (A) reduces progressive motility and increases semen pH. The non buffered (C) semen extender was considered more appropriated for semen dilution for immediate use in artificial insemination. The non buffered and HEPES buffered semen extenders were considered appropriated for cooling equine semen at 5°C during 48h.

The unicellular cyanobacterium Prochlorococcus is the numerically dominant photosynthetic organism throughout the temperate and tropical open oceans, but it is difficult to grow in pure cultures. We developed a system for rendering spontaneous streptomycin-resistant mutants of Prochlorococcus axenic by diluting them to extinction in the presence of “helper” heterotrophic bacteria, allowing them to grow to high cell concentrations, and then killing the helpers with streptomycin. Using axenic strains obtained in this fashion, we demonstrated that Prochlorococcus experiences a number of growth defects in dilute axenic culture, including reduced growth rate, inability to form colonies on solid media, and higher incidence of mortality (i.e., catastrophic failure of liquid cultures). These defects were eliminated when Prochlorococcus was grown in co-culture with a phylogenetically diverse array of helper bacteria. The primary mechanism of helping was enzymatic removal of hydrogen peroxide (HOOH) from the culture medium. Axenic Prochlorococcus cultures were profoundly sensitive to HOOH additions in comparison with reported tolerance levels for all other wild-type aerobic bacteria, but in co-culture their resistance was similar to that of the helpers. Neither is dependence on helpers limited to the laboratory. Sterile-filtered seawater exposed to sunlight accumulated enough HOOH in 24h to kill ecologically relevant cell concentrations of Prochlorococcus. We also refined a method for delivering HOOH at a defined, steady rate using the buffer HEPES to more accurately simulate the steady accumulation of HOOH in natural waters. Even at the lowest production rates that could sustain the in situ HOOH concentration in the ocean, HEPES-generated HOOH was lethal to Prochlorococcus; again, co-culture with helpers prevented this effect. We speculate on the ecological consequences of Prochlorococcus’ dependency on other organisms for survival, as well as the evolutionary forces that have led to this lack of self-sufficiency.

With the discovery of conductivity in doped polyacetylene (PA), a new era in synthetic metals has emerged by breaking the traditionally accepted view that polymers were always insulating. Conducting polymers are essentially characterized by the presence of conjugated bonding on the polymeric back bone, which facilitates the formation of polarons and bipolarons as charge carriers. Among the numerous conducting polymers synthesized to date, polypyrrole (PPy) is by far the most extensively studied because of prodigious number of applications owing to its facile polymerizability, environmental stability, high electrical conductivity, biocompatibility, and redox state dependent physico-chemical properties. Electrochemically prepared PPy is more interesting than the chemically prepared polymer because it adheres to the electrode surface and can be directly used for applications such as supercapacitors, electrochemical sensors, electromechanical actuators and drug delivery systems. In quest for improvement in quality of the device performances in the mentioned applications, micro and nano structured polymeric materials which bring in large surface area are studied. Finding a simple and efficient method of synthesis is very important for producing devices of PPy microstructures. Till date, Hard and soft template methods are the most employed methods for synthesis of these structures. Soft template based electrochemical methods are better than hard template methods to grow clean PPy microstructures on electrode substrates as procedures for removal of hard templates after the growth of microstructures are very complex. As per the literature, there is no unique method available to grow PPy microstructures which can demonstrate several applications. Although gas bubble based soft template methods are exploited to grow conducting polymer microstructures of sizes in few hundreds of micrometers, studies on applications of the same are limited. Hence it is planned to develop procedures to grow microstructures that can be used in several applications. In the current work, PPy microstructures with high coverage densities are synthesized on various electrode substrates by soft template based electrochemical techniques. Hollow, hemispherical and spherical PPy microstructures are developed by a two step method using electro generated hydrogen bubble templates on SS 304 electrodes. In the first step, Hydrogen bubbles are electro generated and stabilized on the electrode in the presence of β- naphthalene sulfonic acid (β-NSA). In the second step, Pyrrole is oxidised over the bubble template to form PPy microstructures. Microstructures (open and closed cups) of average size 15 μm are uniformly spread on the surface with a coverage density of 2.5×105 units /cm2. Globular PPy microstructures are developed by a single step method using concomitantly electro generated oxygen bubble templates on SS 304 electrodes during electropolymerization. Microstructures of average size 4 μm are uniformly spread on the surface with a coverage density of 7×105 units/cm2. Surfactant properties of Zwitterionic 4-(2-hydroxyethyl)-1-piperazine ethane sulfonic acid (HEPES) are exploited for the first time to grow conducting polymer microstructures. Ramekin shaped PPy microstructures are developed using HEPES as the surfactant to stabilize hydrogen bubble templates in a two step electrochemical synthesis method. Microramekins of size 100 µm are uniformly spread on the surface with a coverage density of 3000 units/cm2. Micropipettes and microhorns of PPy are synthesised by a single step electrochemical route using HEPES as a surfactant. Hollow micropipettes of length 7 µm with an opening of 200 nm at the top of the structure are observed. Similarly microhorn/celia structures are observed with length 10-15 µm. Microcelia are uniformly distributed over the surface with each structure having a diameter of 2 µm at the base to 150 nm at the tip. Growth mechanism based on contact angle of the reactant solution droplets on the substrate is proposed. PPy microstructures are characterized by scanning electron microscopy, X-Ray photoelectron spectroscopy, Fourier transform infrared spectroscopy, Raman Spectroscopy and UV-Visible spectroscopy to study morphology, ‘chemical bonding and structure’ , ‘defects and charge carriers’. Applicability of the electrodes with PPy microstructures in supercapacitors is investigated by cyclic voltammetry, chronopotentiometry and electrical impedance spectroscopy. Electrodes developed by all the above methods demonstrated very good supercapacitance properties. Supercapacitor studies revealed very high specific capacitances (580, 915, 728 and 922 F/g,) and specific powers (20, 25, 13.89 and 15.91 kW/kg) for electrodes with PPy microstructures (H2 bubble based two step method, O2 bubble based single step method, HEPES stabilized H2 bubbble method and HEPES based microhorn/celia structures respectively). Supercapacitive behavior of all the electrodes is retained even after an extended charge-discharge cycling in excess of 1500 cycles. Horseradish peroxidase entrapped, bowl shaped PPy microstructures are developed for H2O2 biosensing. Amperometric biosensor has a performance comparable to the sensors reported in the literature with high sensitivity value of 12.8 μA/(cm2.mM) in the range 1.0 mM to 10 mM. Glucose oxidase entrapped PPy amperometric biosensor is developed for Glucose sensing. Sensitivity of 1.29 mA/(cm2.mM) is observed for β-D-Glucose sensing in the 0.1 mM to 5.0 mM range while 58 μA/(cm2.mM) is observed in the 5.0 to 40 mM range. Potentiometric urea sensor with urease entrapped PPy microstructures on SS electrode is developed. It is able to sense urea in the micromolar ranges down to 0.1 μM. It represented an excellent performance with sensitivity of 27 mV/decade. Sensitivity in the micromolar range is 4.9 mV/(μM.cm2). Drug encapsulation and delivery is successfully demonstrated by two actuation means (i) by electrochemical actuation, (ii) by actuation based on pH changes. Concepts are proved by delivering a fluorescent dye into neutral and acidic solutions. Drug delivery is confirmed by UV-Visible spectroscopy and Fluorescence microscopy. Finally, Micro/nanostructures with Tangerine, Hollow globular (Pani Poori), Chip, Flake, Rose, Worm, Horn and Celia shapes are synthesized electrochemically and scanning electron microscopic studies are presented. Controlled growth of microstructures on lithographically patterned gold interdigital electrodes is demonstrated with a future goal of creating addressable microstructures. The studies reported in the thesis provide an insight on various applications of PPy microstructures (supercapacitors, sensors and drug delivery systems) developed by a unique methodology based on electrochemically generated gas bubble templates.

Oxygen homeostasis is essential to the life of aerobes, which is regulated in humans by Hypoxia Inducible Factor-1α (HIF-1α). Under hypoxic conditions, HIF-1α transactivates over a hundred genes related angiogenesis, erythropoiesis, etc. HIF-1α level and function is regulated by four HIF hydroxylase enzymes: three isoforms of prolyl hydroxylase domain (PHD1, PHD2 and PHD3) and factor inhibiting HIF-1α (FIH). PHD2 is the focus of this research. PHD2 is a non-heme Fe(II) 2-oxoglutarate dependent dioxygenase, which controls HIF-1α levels by hydroxylating two proline residues within the ODD domain of HIF-1α, then the hydroxylated prolines are recognized by pVHL, which targets HIF-1α for proteasomal degradation. Under hypoxic conditions PHD2 cannot hydroxylate HIF-1α and its level rises in cells. The aims of this research include understanding how PHD2 chooses its substrate, how the O2 activation occurs, and how certain transition metals inhibit PHD2. Our results revealed that electrostatics play a role in substrate selectivity of PHD2 by provoking a change in the opening and closing rate of β2β3 loop for NODD and CODD substrates. Mutational studies of second coordination sphere residues combined with kinetic studies indicated that decarboxylation of 2OG is the slow step in the chemical mechanism. The removal of a hydrogen-bond by the Thr387aAla mutation revealed a rate 15 times faster than WT-PHD2 by making O2 a better nucleophile. Our results indicate that this hydrogen bonding is essential for proper O2 activation. Previous reports show that certain metals increase HIF-1α levels by inhibiting PHD2. However there are conflicts about how this inhibition occurs, either through metal replacement from the active site or metals binding to a different site causing inhibition. Our competitive and non-competitive kinetic assays showed different inhibition profiles. Under competitive conditions Zn2+, Co2+, Mn2+, and Cu2+ can bind to the enzyme active site and lead to inhibition but under non-competitive conditions Zn2+, Co2+, and Mn2+ partially inhibit PHD2 suggesting that these metals cannot displace the Fe2+ from the active site. XAS experiments with Zn2+ and Fe3+ indicate that Zn2+ binds to the surface of PHD2 in a six-coordinate manner composed of two Cys201, 208, His205, Tyr197 and two water ligands.

Paraplegia or paraparesis caused by temporary cross-clamping of the aorta is a devastating sequela in patients after surgery of the thoracoabdominal aorta. No effective clinical method is available to protect the spinal cord from ischemic reperfusion injury. A small animal (rat) model of spinal cord ischemia is established to better understand the pathophysiological events and to evaluate potential treatments. Eighty-one male Sprague-Dawley rats weighing 300 g to 350 g were used for model development (45) and treatment evaluation (36). The heparinized and anesthetized rat was supported by a respirator following tracheostomy. The thoracic aorta was cannulated via the left carotid artery for post-clamping intra-aortic treatment solution administration. After thoracotomy, the aorta was freed and temporarily clamped just distal to the left subclavian artery and just proximal to the diaphragm for different time intervals: 0, 5, 10, 15, 20, 25, 30, 35, and 40 minutes (five animals per group). The motor function of the lower extremities postoperatively showed consistent impairment after 30 minutes clamping (5/5 rats were paralyzed), and this time interval was used for treatment evaluation. For each treatment, six animals per group were used, and direct local intra-aortic infusion of physiologic solution (2 mL) at different temperatures with or without buffer substances was given immediately after double cross-clamp to protect the ischemic spinal cord. Arterial blood (2 mL) was infused in the control group. The data indicate that the addition of HCO3-(20 mM) to the hypothermic (15 degrees C) solution offered complete protection of the spinal cord from ischemic injury.(ABSTRACT TRUNCATED AT 250 WORDS)