A demanda por transfusões sanguíneas tem aumentado no Brasil e o número de doações de sangue permanecem insuficientes. Há escassez de componentes de sangue para transfusão, principalmente de concentrados de células vermelhas do sangue. As células-tronco pluripotentes induzidas humanas (hiPSCs) possuem um grande potencial para se tornar uma fonte de CÉLULAS VERMELHAS DO SANGUE, pois podem se diferenciar em qualquer tipo celular, incluindo CÉLULAS VERMELHAS DO SANGUE de fenótipo específico. O objetivo deste trabalho é a geração de hiPSCs para partir de células mononucleares de sangue periférico (PBMCs) de candidatos a doação de sangue que possuem fenótipo eritrocitário de baixa imunogenicidade, bem como a diferenciação eritroide das hiPSCs geradas. As amostras de sangue periférico (PB) de 11 indivíduos foram coletadas e caracterizadas quanto ao genótipo para os seguintes antígenos eritrocitários: Sistema Rh (RHCE*01/RHCE*02/RHCE*03/RHCE*04/RHCE*05), Kell (KEL*01/KEL*02), Duffy (FY*01/FY*02 and FY*02N.01), Kidd (JK*01/JK*02) e MNS (GYPB*03/GYPB*04). Outros antígenos de grupos sanguíneos distintos foram determinados por meio de fenotipagem. Duas amostras (PBMCs PB02 e PB12) foram selecionadas para a reprogramação devido ausência de múltiplos antígenos eritrocitários e, portanto, considerados de baixa imunogenicidade. Os PBMCs foram enriquecidos em eritroblastos e em seguida, as células foram transfectadas com os vetores episomais pEB-C5 e pEB-Tg e então, co-cultivados sobre fibroblastos de embriões murinos (MEFs) até o surgimento de colônias semelhantes a hiPSCs (hiPSC PB02 e hiPSC PB12). Estas colônias foram transferidas para condições de cultivo próprias e posteriormente caracterizadas quanto à sua pluripotência. A expressão dos genes de pluripotência OCT4, SOX2 e NANOG demonstrou níveis de expressão maior em comparação às linhagens não pluripotentes. As análises de imunofenotipagem por citometria de fluxo revelaram que em torno de 86% das células expressaram Nanog, 88% Oct4 e 88% Sox2. Os níveis de expressão de genes de pluripotência e marcadores foram consistentes com o estado indiferenciado encontrado em células pluripotentes conhecidas. A análise funcional para avaliação da pluripotência foi realizado pela injeção das hiPScs em camundongos imunodeficientes, demonstrando a formação de teratoma nas linhagens geradas. A metodologia para diferenciação hematopoética das hiPSCs geradas a partir dos corpos embrioides estão em progresso. O potencial de diferenciação foi confirmado durante a padronização deste processo, utilizando ensaio de formação de colônias em metilcelulose. Uma média de 10,5 colônias de precursores eritroide foram obtidas a partir de 50x103 hiPSC PB02 em diferenciação e uma colônia mista (mieloide e linfoide) a partir de 15x103 hiPSC PB12 foram obtidas. Neste trabalho foi possível gerar duas linhagens de hiPSCs com fenótipos de antígenos eritrocitários de interesse que podem ser mantidas em cultura por um longo período (26 passagens) e demonstram um potencial de diferenciação hematopoética. / The demand for blood transfusion has increased in Brazil and the number of blood donations remains insufficient. Therefore, there is a shortage of blood components for transfusion, mainly concentrates of red blood cells (RBCs). Human induced pluripotent stem cells (hiPSCs) have great potential to become a source of RBCs, because they can differentiate into every cellular type, including RBCs of a particular phenotype. The objective of this work was to generate hiPSC from mononuclear cells of peripheral blood (PBMCs) from blood donors who presented low immunogenic phenotype for transfusion, and erythroid differentiation of the generated hiPSCs. Peripheral blood samples from 11 individuals were collected and characterized for the following erythrocyte antigens: Rh system (RHCE*01/RHCE*02/RHCE*03/RHCE*04/RHCE*05), Kell (KEL*01/KEL*02), Duffy (FY*01/FY*02 and FY*02N.01), Kidd (JK*01/JK*02), MNS (GYPB*03/GYPB*04). Additionally, other antigens of different blood groups were determined by phenotyping. The samples PBMC PB02 and PBMC PB12 were chosen for iPS generation due to their multiple negative erythrocyte antigens. They were isolated, expanded into erythroblasts, and transfected using the reprogramming episomal vectors PEB-C5 and PEB-Tg. This population was co-cultured on mouse embryonic fibroblasts (MEFs) until the appearance of hiPSC like colonies (hiPSC PB02 and hiPSC PB12). These colonies were transferred to human embryonic stem cells (hESCs) culture conditions and characterized regarding their pluripotency. The expression of OCT4, SOX2 and NANOG pluripotency genes demonstrated that the expression of both lineages was higher in comparison with non-pluripotent lineages. Immunophenotyping performed by flow cytometry revealed that 86% of cells expressed Nanog, 88% Oct4 and 88% Sox2. Expression levels of pluripotency genes and markers were consistent with undifferentiated state found in known pluripotent cells. Functional analysis for pluripotency was achieved by the hiPSC injection in immunodeficient mice showing that both hiPSC cell lines were able to induce teratoma tumor. The hematopoietic differentiation potential was confirmed using methylcellulose assay, with an average of 10.5 erythroid colonies from 50x103 single cells and a mixed colonies of myeloid and lymphoid cells) and finally a colony composed of white cells from 15x103 PB12 hiPSC. In conclusion, it was possible to generate a hiPSC from a red blood cell phenotype that are negative for multiple antigens, and this cell line can be maintained for a long period in culture (26 passages) and show potential for hematopoietic differentiation.

La leucémie aiguë myéloïde (LAM) est une hémopathie maligne à progression rapide, qui se caractérise par une expansion clonale de précurseurs myéloïdes présentant un contrôle défectueux de leur prolifération et de leur différenciation. Une rémission complète peut être obtenue chez environ 80% à 85% des patients en associant cytarabine et anthracycline qui sont respectivement un inhibiteur de la synthèse d’ADN et un agent intercalant. Néanmoins, les résultats globaux pour les patients atteints de LAM restent médiocres et le taux de survie à 5 ans des patients âgés de plus de 60 ans, est inférieur à 10%. Le paradigme bien accepté de la leucémogenèse est que la leucémie résulte de la transformation d'une cellule unique appelée cellule souche leucémique (SCL) ou cellule initiatrice de leucémie (LIC) qui se développe par autorenouvellement et engendre par division asymétrique les blastes leucémiques bloqués dans leur différentiation. Les LIC vont être responsables du maintien et de la rechute de la maladie après le traitement chimiothérapeutique car si les traitements actuels sont relativement efficaces contre les blastes leucémiques, ils échouent au niveau des LIC. Un autre facteur important impliqué dans la résistance aux traitements est le microenvironnement de la moelle osseuse qui forme la niche hématopoïétique. Des études ont montré que différents composants cellulaires de la niche peuvent transférer des mitochondries à des cellules normales soumises à un stress métabolique ou dans un contexte pathologique, vers des cellules cancéreuses. Durant ma thèse, j'ai pu montrer que les cellules murines de la lignée MS-5 et/ou des cellules stromales primaires humaines dérivées de la moelle osseuse, utilisées comme cellules nourricières dans des expériences de co-culture, sont capables de transférer des mitochondries fonctionnelles aux cellules leucémiques. En utilisant différentes approches moléculaires et d'imagerie, nous avons pu montrer que les cellules de LAM peuvent, par ce transfert, augmenter leur masse mitochondriale jusqu'à 14%. Dans la co-culture, les cellules LAM receveuses ont montré une augmentation de 1,5 fois de la production d'adénosine triphosphate (ATP) mitochondriale et se sont révélées moins sujettes à une dépolarisation mitochondriale après chimiothérapie, affichant une survie plus élevée. Ce transfert unidirectionnel, renforcé par certains agents chimiothérapeutiques, nécessite des contacts cellule-cellule et semble se dérouler par une voie endocytaire qui reste à déterminer. Enfin, nous démontrons que le transfert mitochondrial est observé in vivo dans un modèle de xénogreffe de souris immunodéficientes NSG et se produit également dans les cellules et les progéniteurs initiateurs de la leucémie humaine et leur conférant une capacité plus élevée à initier des cultures leucémiques à long terme. Nous avons ainsi apporté la preuve qu'un transfert horizontal de mitochondries provenant des cellules stromales de la niche hématopoïétique participe aux phénomènes de chimiorésistance des cellules leucémiques receveuses. De ce fait, cibler ce transfert mitochondrial pourrait représenter une future cible thérapeutique originale pour un traitement adjuvant des LAM visant à interférer avec le soutien de leur microenvironnement. / Acute myelogenous leukemia (AML) is a heterogeneous group of hematopoietic malignancies arising from hematopoietic stem and/or progenitor cells that display defective control of their proliferation, differentiation, and maturation. Complete remission is achieved using anthracycline and cytarabine combination therapy in 80% to 85% of older patients. Nevertheless, the overall outcomes for AML patients remain poor, and the 5-year survival rate for patients over 60 is less than 10%. The well-accepted paradigm of leukemogenesis is that leukemia arises from the transformation of a single cell and is maintained by a small population of leukemic stem cells (LSC) or leukemia initiating cells (LICs). It is theorized that current treatments, although highly effective against the leukemic bulk, fail to eradicate the LICs that are therefore responsible for leukemia relapse. Another important factor involved in resistance to treatments is the microenvironment of the bone marrow, which is called the hematopoietic niche. Studies have shown that different niche cell components can transfer mitochondria to normal cells that undergo a metabolic stress and in a pathological context, to cancer cells. During my PhD we demonstrate that in an ex vivo niche-like coculture system, cells both primary and cultured AML cells take up functional mitochondria from murine or human bone marrow stromal cells. Using different molecular and imaging approaches, we show that AML cells can increase their mitochondrial mass by up to 14%. After coculture, recipient AML cells showed a 1.5-fold increase in mitochondrial ATP production and were less prone to mitochondrial depolarization after chemotherapy, displaying a higher survival. This unidirectional transfer enhanced by some chemotherapeutic agents required cell–cell contacts and proceed through an ill-defined endocytic pathway. Transfer was greater in AML blasts compared with normal cord blood CD34+ cells. Finally, we demonstrate that mitochondrial transfer was observed in vivo in an NSG immunodeficient mouse xenograft model and also occurred in human leukemia initiating cells and progenitors. As mitochondrial transfer provides a clear survival advantage following chemotherapy and a higher leukemic long-term culture initiating cell potential, targeting mitochondrial transfer could represent a future therapeutic target for AML treatment.

A síndrome mielodisplásica (SMD) é uma doença hematológica heterogênea, caracterizada por hematopoese anormal, displasia e instabilidade genômica, portanto, a análise citogenética é determinante no diagnóstico, prognóstico e acompanhamento evolutivo da doença. Considerando que as células hematopoéticas (CHs) e as estromais mesenquimais multipotentes (CTMs) estão em estreita associação, estudos que visem à caracterização destas poderão contribuir para elucidar os mecanismos que governam a progressão tumoral e identificar novos alvos terapêuticos. Objetivo: Caracterizar e comparar as CHs e CTMs derivadas de pacientes através da citogenética convencional e molecular para os genes aurora cinase A e B. Avaliar as propriedades biológicas das CTMs derivadas de SMD e controles saudáveis. Métodos: o estudo iniciou-se com a avaliação clinica de 25 pacientes e 8 controles saudáveis doo HCFMRP-USP e HAC-Jaú. Em seguida, foi realizada a análise cariótipica das CHs e CTMs da medula óssea pelo bandamento G e por FISH para os genes aurora A e B e o perfil imunofenotípico, bem como potencial de diferenciação em adipócito e osteócito das CTMs de pacientes portadores de SMD e controles saudáveis. Resultados: A avaliação clínica mostrou plaquetopenia (76%), neutropenia (100%), hemoglobina baixa (16%). A análise citogenética das CHs revelou cariótipo alterado em 13 pacientes (52%), com cariótipo complexo resultando em alterações numéricas e estruturais. Ao contrário, nas CTMs, o cariótipo se mostrou alterado em sete pacientes (28%) e um padrão de menor complexidade, apenas quatro pacientes apresentaram alterações nas duas populações celulares, porém, diferentes. Foram encontradas apenas alterações numéricas (sendo 86% monossomia e 14% ganho de cromossomo). As CHs e CTMs dos controles apresentaram cariótipos 100% normais. Na análise de FISH não foi evidenciada amplificação dos genes AURKA e AURKB. As CTMs dos pacientes e controles apresentaram-se semelhantes quanto à morfologia e potencial de diferenciação. Entretanto, as CTMs de pacientes mostraram-se alteradas para dois antígenos de superfície, CD90 e CD146, os quais mostraram níveis de expressão mais elevados nas amostras dos pacientes (p= 0,04, p = 0,001 respectivamente). Conclusão: Observou-se que as CTMs se encontram alteradas embora em menor frequência e diferindo das alterações encontradas nas CHs. Esses dados sugerem que as CTMs devem exercer importante papel na progressão tumoral e devem ser consideradas como alvos na busca de novas terapias e melhor esclarecimento dos mecanismos que governam a progressão tumoral. Apesar de não ter evidenciado amplificação dos genes AURKA e AURKB em SMD, estudos futuros que visem avaliar o nível de expressão dessas enzimas em pacientes portadores ou não de alterações citogenéticas poderão contribuir para a compreensão do envolvimento ou não desse gene com a evolução da doença. Além disso, não foi evidenciada associação de anemia profunda e citogenética alterada. / The myelodysplastic syndrome (MDS) is a heterogeneous hematologic disease characterized by abnormal hematopoiesis, dysplasia and genomic instability, therefore, cytogenetic analysis is crucial in the diagnosis, prognosis and monitoring of disease evolution. Whereas hematopoietic cells (CHs) and stromal multipotent mesenchymal (MSCs) are in close association studies aimed at the characterization of these may help to elucidate the mechanisms that govern tumor progression and identify novel therapeutic targets. Objective: To characterize and compare the CHs and MSCs derived from patients by conventional cytogenetics and molecular genes aurora kinase A and B. To evaluate the biological properties of MSCs derived from MDS and healthy controls. Methods: The study began with the clinical evaluation of 25 patients and eight healthy controls HCFMRP dooUSP and CH-Jau. Next, we performed a karyotypic analysis of CHs and MSCs from bone marrow by G-banding and FISH for aurora A and B genes and immunophenotypic profile and potential to differentiate into adipocytes and osteocytes of MSCs in patients with MDS and controls healthy. Results: The clinical evaluation showed thrombocytopenia (76%), neutropenia (100%), low hemoglobin (16%). The cytogenetic analysis revealed karyotype of CHs changed in 13 patients (52%), resulting in complex karyotype with numerical and structural changes. In contrast, in MSC, the karyotype was abnormal in seven patients (28%) and a pattern of lower complexity, only four patients had changes in both cell populations, however, different. Were found only numerical changes (monosomy being 86% and 14% gain in chromosome). The CHs and MSCs controls showed 100% normal karyotypes. In FISH analysis there was no evidence of gene amplification and AURKA AURKB. The MSCs of patients and controls were similar regarding the morphology and differentiation potential. However, the CTMs of patients proved to be changed to two surface antigens, CD90 and CD146, which showed higher expression levels in samples of patients (p = 0.04, p = 0.001 respectively). Conclusion: Furthermore, it was observed that the MSCs are changed although less frequently and differing from changes found in CHs. These data suggest that MSCs should play an important role in tumor progression and should be considered as targets in the search for new therapies and better explain the mechanisms that govern tumor progression. Although not shown AURKA amplification of genes in MDS and AURKB, future studies aimed at assessing the level of expression of these enzymes in patients with or without cytogenetic alterations may contribute to the understanding of the involvement or not of this gene with the disease. This study can not associate with profound anemia cytogenetic changes.

La cystinose est une maladie lysosomale héréditaire due à une mutation du gène CTNS codant pour un transporteur de cystine, cystinosin, et est caractérisée par l’accumulation de cystine dans les organes causant leur dégénération.Si le rein est le premier organe affecté par la maladie, sa pathogénèse n’est pas encore totalement comprise. La recherche de nouveaux partenaires de la cystinosine a révélé une interaction avec un membre de la famille des galactines, galectine-3 (Gal3). L’étude de cette interaction a mis en évidence un nouveau rôle de la cystinosine dans l’inflammation chronique impliquée dans la pathogénèse rénale de la cystinose. Dans les reins du modèle murin de la cystinose (Ctns-/-), l’expression de Gal3 est augmentée et de nombreux infiltrats de cellules inflammatoires sont observés. De plus, l’expression de la cytokine pro-inflammatoire Monocyte Chemoattractant Protein-1 (MCP1) est augmentée dans le sérum des souris Ctns-/-.Au contraire, peu d’infiltrat et un taux normal de MCP1 sont observés dans les souris Ctns-/-Gal3-/-, ainsi qu’une meilleure structure et fonction rénale.Ce travail pourrait permettre la découverte de nouvelles cibles thérapeutiques pour la cystinose.Des études antérieures ont montré que la transplantation de Cellules Souches Hématopoïétiques (CSH) saines peut efficacement traiter la cystinose dans les souris Ctns-/-. Toutefois, dû aux risques liés à une transplantation allogénique, une transplantation autologue de CSH génétiquement modifiées ex vivo pour exprimer une copie fonctionnelle du gène CTNS a été développée.Nous résumons ici les études pharmacologiques et toxicologiques ainsi que le développement du protocole de transduction des cellules humaines qui seront inclus dans une application intitulée« Investigational New Drug » qui sera soumise à la FDA afin de débuter un essai clinique de phase I/II. / Cystinosis is an inherited lysosomal storage disorder caused by mutations in the gene CTNS encoding the cystine transporter cystinosin, and is characterized by accumulation of cystine in the tissues leading to multiorgan degeneration.The kidney is the first organ impacted by cystinosis but the pathogenesis is still not fully understood. The study of new partners of cystinosin revealed an interaction with galectin-3, a member of the galectin’s family. The investigation of this interaction unraveled a new role for cystinosin in chronic inflammation associated with kidney pathology in cystinosis. Indeed, the cystinosis mouse model, Ctns-/ mice, had increased expression of Gal3 and abundant pro-inflammatory infiltrates in their kidney, as well as increased expression of Monocyte Chemoattractant Protein-1 (MCP1), a proinflammatory cytokine, in their serum.In contrast, few infiltrates and normal MCP1 levels were observed in the Ctns-/- Gal3-/- mice, which also demonstrated better kidney structure and function.This study may lead to the discovery of new drug targets for cystinosis treatment.Previous studies showed that wild-type Hematopoietic Stem Cells (HSCs) transplantation had the potential to rescue cystinosis in Ctns-/- mice.However, due to the risks associated with allogeneic transplant, an autologous transplantation of HSCs genetically modified ex vivo to express a functional CTNS gene has been developed in the laboratory. In this work, we summarized the pharmacology and toxicology studies and manufacturing development that will be included in an Investigational New Drug application to be submitted to the FDA to start a phase I/II clinical trial for cystinosis.

Embryonic stem (ES) cells possess the remarkable ability to form cells and tissues from all three germ layers, a characteristic known as pluripotency. In particular, the generation of ES cell-derived hematopoietic cells could serve as an alternate source of hematopoietic stem cells for transplantation in place of bone marrow cells, which are limited by donor availability and high immunogenicity. The advantages of ES cell-derived hematopoietic cells over bone marrow cells include a greater proliferative capacity, which alleviates the problems of donor shortage, and low level expression of MHC antigens, which suggests immune privilege. However, it is unclear whether the immune system is capable of recognizing and rejecting ES cell-derived hematopoietic cells following transplantation. The observation that ES cell-derivatives express low levels of MHC class I, the predominant inhibitory ligand for NK cells, led us to hypothesize that ES cell-derived hematopoietic progenitor cells (HPC) are susceptible to NK cell-mediated killing. To test this hypothesis, we first generated HPCs from murine ES cells ectopically expressing HOXB4, a homeobox transcription factor that confers hematopoietic self-renewal, and confirmed that HPCs expressed low levels of MHC class I antigens. To specifically investigate the role of NK cells in regulating the in vivo engraftment of HPCs, we transplanted NK-replete Rag2-/- or NK-deficient Rag2-/-γc-/- mice with HPCs. We observed permanent HPC engraftment in Rag2-/-γc-/- mice; however, HPC engraftment was significantly reduced in Rag2-/- mice and was eventually eliminated over time. Bone marrow harvested from these animals showed that HPC-derived Lin-c-kit+ and Lin-Sca-1+ progenitor cells, critical progenitor cells for long-term hematopoietic engraftment, were deleted in Rag2-/- but not in Rag2-/-γc-/- mice. Next, we focused on the mechanism of NK cell activation by HPCs. Increased expression of the cytotoxic proteins Granzyme B and Perforin in the NK cells of HPC-transplanted Rag2-/- mice confirmed in vivo NK cell activation. Phenotypic analysis of HPCs revealed high level expression of H60, a ligand of the NK activating receptor NKG2D, and neutralization of H60 rescued HPCs from NK cell-mediated killing. Altogether, our results demonstrate that NK cells are a major barrier to the successful engraftment of ES cell-derived hematopoietic cells, underlining an important role of the innate immune system in regulating the long-term engraftment of ES cell derivatives.

Network biology has proven to be powerful tool for representing and analyzing complex molecular networks. It has also been successfully applied to biological field helping understand various biological processes. However, our current knowledge about the dynamics of gene networks during disease progression is rather limited. On the other hand, network construction is a prerequisite of network analysis. When the number of samples is limited, state-of-art computational methods for network construction are not robust in terms of low statistical power. In addition, molecular networks have been used extensively to improve the inference accuracy of causal coding variants, but this potential has not been investigated to the same extent for noncoding variants. To address those limitations, I first developed inference of multiple differential modules (iMDM) algorithm to study network dynamics. This method is able to identify both unique and shared modules from multiple gene networks, each of which denoting a different perturbation condition. Using iMDM algorithm, I identified different types of modules to understand heart failure progression and disease dynamics. Next, I developed a computational framework to construct condition specific transcriptional regulatory network. I also developed a computational method to rank transcription factors in the transcriptional regulatory network. Applying this framework to RNA-seq data for hematopoietic stem cell development, I successfully constructed corresponding transcriptional regulatory network and identified key transcriptional factors that play important roles. Finally, I developed Annotation of Regulatory Variants using Integrated Networks (ARVIN), a network-based algorithm, to identify causal genetic variants for diseases. By applying ARVIN to various diseases, we obtained a systems understanding of the gene circuitry that is affected by all enhancer mutations in a given disease.

Les syndromes myélodysplasiques (SMD) sont dus à une atteinte oligoclonale de la cellule souche hématopoïétique aboutissant à une dysplasie des lignées myéloïdes, des cytopénies sanguines et une évolution fréquente vers la leucémie aiguë. De nombreuses mutations décrites dans des gènes contrôlant la régulation épigénétique sont responsables de la genèse des SMD. Mais des travaux récents montrent également que des anomalies du microenvironnement médullaire, notamment des cellules stromales mésenchymateuses (CSM), peuvent induire et propager un SMD suggérant l’idée d’une communication intercellulaire étroite entre la niche et les cellules hématopoïétiques. L’invalidation du gène Dicer1 (RNASE de type III impliquée dans le processing des microARN) dans les progéniteurs ostéoblastiques murins induit un véritable SMD avec dysmyélopoïèse.Nous avons confirmé la sous-expression de Dicer1 dans les CSM SMD à partir de prélèvements primaires de moelle totale et dans les CSM en expansion. La sous-expression de Dicer1 s’accompagne d’une dérégulation du profil des microARN au sein de CSM SMD mise en évidence par étude transcriptomique des CSM SMD vs CSM témoins. Nous avons découvert une possible cible thérapeutique : le miR-486-5p que nous avons retrouvé constamment surexprimé dans les CSM SMD. Un des moyens pour les CSM d’influer sur les cellules souches hématopoïétiques peut se faire par la sécrétion de vésicules extracellulaires (EVs). Ces EVs sont hétérogènes et peuvent être définies par leur taille. Nous nous sommes plus particulièrement intéressés aux petites vésicules extracellulaires (sEVs) contenant la fraction exosomale qui est connue comme pouvant transporter des microARN, mARN et des protéines entre les cellules. Nous avons retrouvé ce miR-486-5p transporté comme cargo dans les sEVs sécrétées des CSM, des CSM vers les CD34+. De plus, nous montrons dans un modèle de co-incubation (sEVs avec CD34+ de sujets sains), que sur le plan fonctionnel, les sEVs provenant de CSM SMD induisent plus d’apoptose, plus de stress oxydatif ainsi que plus de dommage à l’ADN.Par ailleurs, la surcharge martiale observée chez les patients SMD est également responsable d’un stress oxydatif. Le déférasirox (DFX), un chélaleur de fer, a montré dans le cadre d’études rétrospectives une amélioration de l’érythropoïèse chez des patients SMD. Grâce à un modèle de différenciation érythroïde avec surcharge martiale, nous avons montré que de faibles doses de DFX induisent une meilleure prolifération des progéniteurs érythroïdes (moins d’apoptose et plus de cellules en cycle) via une activation de NF-κB. Cette activation est due à une diminution du niveau de dérivés réactifs de l’oxygène (ROS) en rapport avec une diminution du fer labile et est contrôlée de manière très fine par le niveau de ROS.Enfin, nous avons utilisé les propriétés du microenvironnement médullaire pour établir un modèle murin de SMD humain. En effet, la relative incapacité des cellules souches myélodysplasiques humaines de greffer et de reconstituer une hématopoïèse pathologique dans des souris immunodéprimées suggère que ces cellules souches SMD doivent avoir besoin d’un support extrinsèque du microenvironnement. Nous avons réalisé un modèle de souris humanisées en co-injectant des CSM et des CD34+ en intratibial. Une prise de greffe a été observée chez toutes les souris injectées et avons pu étudier l’évolution clonale au fil des générations dans les différentes sous-populations de progéniteurs myéloïdes (common myeloid progenitors (CMP), granulocyte macrophage progenitors (GMP) and megakaryocyte–erythroid progenitor (MEP)). Notre modèle est stable au cours des générations avec persistance du clone fondateur initial.En conclusion, ce travail confirme le rôle prépondérant du microenvironnement médullaire dans la genèse et la physiopathologie des syndromes myélodysplasiques et ouvre la voie à de nouvelles possibilités thérapeutiques. / Myelodysplastic syndromes (MDS) are hematopoietic stem cell (HSC) oligoclonal diseases leading to dysplasia, blood cytopenia and evolution to acute leukemia. Numerous mutations in genes involved in epigenetic regulation are responsible of MDS genesis. But recently, studies show that medullar microenvironment, particularly mesenchymal stromal cells (MSC), could induces and propagates a truly MDS suggesting a narrow communication between HSC and this niche. Dicer1’s (type III RNAse implicating in microRNA processing) invalidation in murine osteoblastic progenitors induces a MDS with sign of dysplasia.In this work, we have confirmed the under expression of Dicer1 in MDS mesenchymal stromal cells from total bone marrow and cultured MSC. Dicer1 down regulation leads to a deregulation of miRNome profile in MDS MSC highlighted by transcriptomic approaches. We found a potential therapeutic target: miR-486-5p which is constantly overexpressed in MDS MSC. Extracellular vesicles (EVs) could be a possible way for MSC to influence HSC fates. Those EVs are heterogeneous are could be characterized by their sight. We mainly focused on small EVs (sEVs) containing the exosomal fraction known to be able to carry miRNA, mRNA and proteins. We found that miR-486-5p is carry from MSC to the HSC. Transcriptomic analyses of HD HSC overexpressing miR-486-5p are ongoing. Moreover, in a co-incubation model (sEVs and healthy donor (HD) HSC), sEVs coming from MDS MSC induced apoptosis, oxidative stress and DNA damages.Moreover, iron overload seen in MDS patients is also able to induce DNA damages and oxidative stress. Deferasirox (DFX), an iron chelator, has shown an erythropoiesis improvement in MDS patients. Using an erythroid differentiation model with iron overload, we have observed that low dose of DFX induce a better proliferation of erythroid progenitors (less apoptosis and more cycling cells) due to NF-κB activation. This activation is due to a decrease of reactive oxygen species level in relation to a decrease of the labile iron pool.Finally, we have used medullar microenvironment properties to establish a murine model of MDS. Indeed, MDS HSC incapacity to reconstitute a pathological hematopoiesis in immunocompromised mice suggests that MDS HSC need an extrinsic support from the microenvironment. We have engineered a MDS patient derived xenograft (PDX) model by intra-tibial co-injection CD34+ cells with MSC. All mice engrafted et we have follow the clonal evolution over mice generation in the different subset of myeloid progenitors. (common myeloid progenitors (CMP), granulocyte macrophage progenitors (GMP) and megakaryocyte–erythroid progenitor (MEP)). Our model is stable over generations with persistence of the initial founding clone.In conclusion, this work confirms the preponderant role of the medullary microenvironment in the genesis and physiopathology of myelodysplastic syndromes and opens the way to new therapeutic possibilities.

Nanoscopic spatial reorganization of selectin ligands, CD44 and PSGL-1, during the initial step of hematopoietic stem/progenitor cell (HSPC) homing, tethering and rolling of migrating cells over E-selectins, has been recently reported. However, the exact spatial distribution of these ligands and their spatial reorganization during the cell rolling on E-selectins are still an open question. The spatiotemporal characterization at the nanoscale level requires high resolution imaging methods. In this study, I quantitatively characterize nanoscopic spatiotemporal behavior of the selectin ligands on the migrating cells to understanding the molecular mechanism of the cell rolling at the nanoscale level by means of a microfluidics-based 3D super-resolution fluorescence microscopy technique. The obtained results suggest that PSGL-1 on the cell shows significant change in the axial distribution on the cell during the cell rolling on E-selectin whereas the spatial distribution of CD44 along the axial direction is not affected significantly by the cell rolling. These findings indicate that each selectin ligand has a distinct contribution to the initial step of the HSPC homing because of their distinct spatial localizations on the cells that regulate at least partly the accessibility of these ligands to the surface E-selectin.

Hematopoietic cells exploit the multistep paradigm of cell migration to ultimately enable them to perform their function. This process is dictated by the ability of adhesion molecules on the circulating hematopoietic cells to find their counter-receptors on endothelial cells. Of those molecules, the selectin family and their respective ligands induce the initial transient interactions between circulating cells and the opposing endothelium. In this thesis, I focused on studying E-selectin mediated cellular migration in two hematopoietic cell types, namely human hematopoietic stem and progenitor cells (HSPCs) and human T-lymphocytes. HSPCs derived from pluripotent sources theoretically offers a novel, unlimited source for hematopoietic stem cell transplantation therapy. In vitro pluripotent stem cell derived- hematopoietic stem/progenitor cells (ES/iPS-HSPCs) behave much like somatic HSPCs in that they exhibit clonal expansion and multilineage hematopoietic capacity. However, unlike somatic sources, ES/iPS-HSPCs do not give rise to effective hematopoietic repopulation, which may be due to insufficient HSPCs homing to the bone marrow. HSPCs exploit E- and P-selectin to home and engraft into bone marrow niches. Thus, one of my objectives in this thesis was to study the expression of E-selectin ligands associated with ES/iPS-HSPCs. I showed that ES/iPS-HSPCs lack functional E-selectin ligand(s). In an effort to enhance the interaction between Eselectin and ES/iPS-HSPCs, we decorated the cell surface with sialyl-Lewis x (sLex) using the ex-vivo glycan engineering technology. However, this decoration did not improve the engraftment capacity of ES/iPS-HSPCs, in vivo. Induction of E-selectin expression during inflammation is key to recruitment of immune cells and therefore I also focused on analyzing the expression of E-selectin ligands on activated human T-cells. I identified several novel glycoproteins that may function as E-selectin ligands. Specifically, I compared the role of the known E-selectin ligands, namely PSGL-1 and CD43, to CD44. I showed that CD44 purified from in vitro human activated T-cells or from psoriasis patients acts as a functional E-selectin ligand. Furthermore, our knock-down studies demonstrated that CD44, and not CD43, cooperates with P-selectin glycoprotein ligand-1 (PSGL-1) as a major E-selectin ligand.

京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第22359号 / 医博第4600号 / 新制||医||1042(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 長尾 美紀, 教授 滝田 順子, 教授 河本 宏 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM